RNA–Protein interactions for RNA: ENST00000494262.5

CDKN2A-206, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 989 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-206ENST00000494262 POGZQ7Z3K3 1410 aa36■■■■□ 3.35
CDKN2A-206ENST00000494262 ARHGAP5Q13017 1502 aa36■■■■□ 3.35
CDKN2A-206ENST00000494262 ZFYVE16Q7Z3T8 1539 aa35.97■■■■□ 3.35
CDKN2A-206ENST00000494262 ADAMTSL3P82987 1691 aa35.94■■■■□ 3.34
CDKN2A-206ENST00000494262 MAGI2Q86UL8 1455 aa35.94■■■■□ 3.34
CDKN2A-206ENST00000494262 YEATS2Q9ULM3 1422 aa35.94■■■■□ 3.34
CDKN2A-206ENST00000494262 BCORL1Q5H9F3 1711 aa35.92■■■■□ 3.34
CDKN2A-206ENST00000494262 CEP162Q5TB80 1403 aa35.91■■■■□ 3.34
CDKN2A-206ENST00000494262 CDC42BPBQ9Y5S2 1711 aa35.89■■■■□ 3.34
CDKN2A-206ENST00000494262 PREX2Q70Z35 1606 aa35.87■■■■□ 3.33
CDKN2A-206ENST00000494262 PTPRMP28827 1452 aa35.84■■■■□ 3.33
CDKN2A-206ENST00000494262 ZNF518AQ6AHZ1 1483 aa35.84■■■■□ 3.33
CDKN2A-206ENST00000494262 HECW2Q9P2P5 1572 aa35.84■■■■□ 3.33
CDKN2A-206ENST00000494262 MADDQ8WXG6 1647 aa35.83■■■■□ 3.33
CDKN2A-206ENST00000494262 AFAP1Q8N556 730 aa35.81■■■■□ 3.32
CDKN2A-206ENST00000494262 CDC42BPAQ5VT25 1732 aa35.79■■■■□ 3.32
CDKN2A-206ENST00000494262 SIGLEC1Q9BZZ2 1709 aa35.79■■■■□ 3.32
CDKN2A-206ENST00000494262 ATP10AO60312 1499 aa35.77■■■■□ 3.32
CDKN2A-206ENST00000494262 KDM5CP41229 1560 aa35.76■■■■□ 3.32
CDKN2A-206ENST00000494262 ABCC1P33527 1531 aa35.76■■■■□ 3.31
CDKN2A-206ENST00000494262 LOC105371045A0A1W2PR82 267 aa35.75■■■■□ 3.31
CDKN2A-206ENST00000494262 MTUS2Q5JR59 1369 aa35.74■■■■□ 3.31
CDKN2A-206ENST00000494262 MYT1LQ9UL68 1186 aa35.73■■■■□ 3.31
CDKN2A-206ENST00000494262 C9orf84Q5VXU9 1444 aa35.73■■■■□ 3.31
CDKN2A-206ENST00000494262 ARHGEF12Q9NZN5 1544 aa35.72■■■■□ 3.31
CDKN2A-206ENST00000494262 MLECQ14165 292 aa35.71■■■■□ 3.31
CDKN2A-206ENST00000494262 RIMS1Q86UR5 1692 aaKnown RBP35.71■■■■□ 3.31
CDKN2A-206ENST00000494262 GPATCH8Q9UKJ3 1502 aaKnown RBP35.7■■■■□ 3.31
CDKN2A-206ENST00000494262 TRAPPC8Q9Y2L5 1435 aa35.7■■■■□ 3.31
CDKN2A-206ENST00000494262 ITSN2Q9NZM3 1697 aa35.69■■■■□ 3.3
CDKN2A-206ENST00000494262 ZNF777Q9ULD5 760 aaPredicted RBP35.69■■■■□ 3.3
CDKN2A-206ENST00000494262 CCNB3Q8WWL7 1395 aa35.65■■■■□ 3.3
CDKN2A-206ENST00000494262 MLH3Q9UHC1 1453 aa35.64■■■■□ 3.3
CDKN2A-206ENST00000494262 SAMD9LQ8IVG5 1584 aa35.63■■■■□ 3.29
CDKN2A-206ENST00000494262 DIP2CQ9Y2E4 1556 aa35.62■■■■□ 3.29
CDKN2A-206ENST00000494262 CFDP1Q9UEE9 299 aaPredicted RBP35.61■■■■□ 3.29
CDKN2A-206ENST00000494262 EHBP1L1Q8N3D4 1523 aa35.61■■■■□ 3.29
CDKN2A-206ENST00000494262 ABCA6Q8N139 1617 aa35.59■■■■□ 3.29
CDKN2A-206ENST00000494262 PLPPR3Q6T4P5 718 aa35.58■■■■□ 3.29
CDKN2A-206ENST00000494262 FER1L4A9Z1Z3 1794 aa35.58■■■■□ 3.29
CDKN2A-206ENST00000494262 SYCP2Q9BX26 1530 aa35.57■■■■□ 3.29
CDKN2A-206ENST00000494262 HNRNPMP52272 730 aaKnown RBP eCLIP35.54■■■■□ 3.28
CDKN2A-206ENST00000494262 REREQ9P2R6 1566 aa35.53■■■■□ 3.28
CDKN2A-206ENST00000494262 TIAM1Q13009 1591 aa35.52■■■■□ 3.28
CDKN2A-206ENST00000494262 PLEKHH2Q8IVE3 1493 aa35.52■■■■□ 3.28
CDKN2A-206ENST00000494262 KIDINS220Q9ULH0 1771 aa35.51■■■■□ 3.27
CDKN2A-206ENST00000494262 VPS8Q8N3P4 1428 aa35.5■■■■□ 3.27
CDKN2A-206ENST00000494262 KIAA1107Q9UPP5 1409 aa35.5■■■■□ 3.27
CDKN2A-206ENST00000494262 SPAG9O60271 1321 aaKnown RBP35.47■■■■□ 3.27
CDKN2A-206ENST00000494262 LMTK3Q96Q04 1460 aa35.44■■■■□ 3.26
CDKN2A-206ENST00000494262 AGLP35573 1532 aa35.42■■■■□ 3.26
CDKN2A-206ENST00000494262 ZNF644Q9H582 1327 aaPredicted RBP35.42■■■■□ 3.26
CDKN2A-206ENST00000494262 SUPT6HQ7KZ85 1726 aaKnown RBP35.41■■■■□ 3.26
CDKN2A-206ENST00000494262 NCOA2Q15596 1464 aa35.41■■■■□ 3.26
CDKN2A-206ENST00000494262 ATP7AQ04656 1500 aa35.37■■■■□ 3.25
CDKN2A-206ENST00000494262 INO80Q9ULG1 1556 aaPredicted RBP35.34■■■■□ 3.25
CDKN2A-206ENST00000494262 CEBPAP49715 358 aaPredicted RBP35.34■■■■□ 3.25
CDKN2A-206ENST00000494262 LRRC9Q6ZRR7 1453 aa35.32■■■■□ 3.24
CDKN2A-206ENST00000494262 MBD5Q9P267 1494 aa35.31■■■■□ 3.24
CDKN2A-206ENST00000494262 ESF1Q9H501 851 aaKnown RBP35.3■■■■□ 3.24
CDKN2A-206ENST00000494262 HSPA2P54652 639 aa35.28■■■■□ 3.24
CDKN2A-206ENST00000494262 A2MP01023 1474 aa35.25■■■■□ 3.23
CDKN2A-206ENST00000494262 MAP3K1Q13233 1512 aa35.25■■■■□ 3.23
CDKN2A-206ENST00000494262 CAMSAP2Q08AD1 1489 aa35.24■■■■□ 3.23
CDKN2A-206ENST00000494262 PLXNC1O60486 1568 aa35.22■■■■□ 3.23
CDKN2A-206ENST00000494262 KANK4Q5T7N3 995 aaPredicted RBP35.22■■■■□ 3.23
CDKN2A-206ENST00000494262 PREX1Q8TCU6 1659 aa35.21■■■■□ 3.23
CDKN2A-206ENST00000494262 C3P01024 1663 aa35.2■■■■□ 3.23
CDKN2A-206ENST00000494262 CNTLNQ9NXG0 1405 aa35.19■■■■□ 3.22
CDKN2A-206ENST00000494262 CCDC141Q6ZP82 1450 aa35.18■■■■□ 3.22
CDKN2A-206ENST00000494262 ADGBQ8N7X0 1667 aa35.17■■■■□ 3.22
CDKN2A-206ENST00000494262 RTEL1-TNFRSF6BF6WH68 1400 aa35.17■■■■□ 3.22
CDKN2A-206ENST00000494262 RSPH4AQ5TD94 716 aa35.13■■■■□ 3.21
CDKN2A-206ENST00000494262 ILDR1Q86SU0 546 aaPredicted RBP35.13■■■■□ 3.21
CDKN2A-206ENST00000494262 UHRF1BP1Q6BDS2 1440 aa35.12■■■■□ 3.21
CDKN2A-206ENST00000494262 SETD1BQ9UPS6 1966 aaKnown RBP35.11■■■■□ 3.21
CDKN2A-206ENST00000494262 GGT6Q6P531 493 aa35.1■■■■□ 3.21
CDKN2A-206ENST00000494262 APLP2Q06481 763 aa35.09■■■■□ 3.21
CDKN2A-206ENST00000494262 ARHGEF5Q12774 1597 aa35.08■■■■□ 3.21
CDKN2A-206ENST00000494262 MROH2AA6NES4 1674 aa35.08■■■■□ 3.21
CDKN2A-206ENST00000494262 DHX29Q7Z478 1369 aaKnown RBP35.06■■■■□ 3.2
CDKN2A-206ENST00000494262 ZMYM3Q14202 1370 aa35.05■■■■□ 3.2
CDKN2A-206ENST00000494262 MYOM3Q5VTT5 1437 aa35.05■■■■□ 3.2
CDKN2A-206ENST00000494262 CLTCQ00610 1675 aaKnown RBP35.04■■■■□ 3.2
CDKN2A-206ENST00000494262 TSPY4P0CV99 314 aa35.03■■■■□ 3.2
CDKN2A-206ENST00000494262 TSPY10P0CW01 314 aa35.03■■■■□ 3.2
CDKN2A-206ENST00000494262 MIA2Q96PC5 1412 aa35.01■■■■□ 3.2
CDKN2A-206ENST00000494262 PPP6R1Q9UPN7 881 aa34.98■■■■□ 3.19
CDKN2A-206ENST00000494262 NPATQ14207 1427 aa34.98■■■■□ 3.19
CDKN2A-206ENST00000494262 KIF3BO15066 747 aa34.95■■■■□ 3.19
CDKN2A-206ENST00000494262 MAST1Q9Y2H9 1570 aa34.91■■■■□ 3.18
CDKN2A-206ENST00000494262 STRCQ7RTU9 1775 aa34.89■■■■□ 3.18
CDKN2A-206ENST00000494262 PTPRKQ15262 1439 aa34.88■■■■□ 3.17
CDKN2A-206ENST00000494262 DMRT2Q9Y5R5 561 aa34.84■■■■□ 3.17
CDKN2A-206ENST00000494262 PTPN23Q9H3S7 1636 aa34.83■■■■□ 3.17
CDKN2A-206ENST00000494262 KDM5DQ9BY66 1539 aa34.81■■■■□ 3.16
CDKN2A-206ENST00000494262 FBXO41Q8TF61 875 aa34.81■■■■□ 3.16
CDKN2A-206ENST00000494262 WASHC2CQ9Y4E1 1318 aa34.8■■■■□ 3.16
CDKN2A-206ENST00000494262 MYO3AQ8NEV4 1616 aa34.79■■■■□ 3.16
CDKN2A-206ENST00000494262 FAM135AQ9P2D6 1515 aa34.79■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms