RNA–Protein interactions for RNA: ENST00000493814.1

C1orf43-209, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 2

Gene C1orf43, Length 441 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-209ENST00000493814 ARHGAP5Q13017 1502 aa14.71□□□□□ -0.05
C1orf43-209ENST00000493814 BCORL1Q5H9F3 1711 aa14.71□□□□□ -0.05
C1orf43-209ENST00000493814 CEP162Q5TB80 1403 aa14.7□□□□□ -0.06
C1orf43-209ENST00000493814 ADAMTSL3P82987 1691 aa14.69□□□□□ -0.06
C1orf43-209ENST00000493814 ZFYVE16Q7Z3T8 1539 aa14.69□□□□□ -0.06
C1orf43-209ENST00000493814 SCAPERQ9BY12 1400 aa14.68□□□□□ -0.06
C1orf43-209ENST00000493814 ITSN2Q9NZM3 1697 aa14.68□□□□□ -0.06
C1orf43-209ENST00000493814 POGZQ7Z3K3 1410 aa14.67□□□□□ -0.06
C1orf43-209ENST00000493814 EFCAB2Q5VUJ9 269 aa14.67□□□□□ -0.06
C1orf43-209ENST00000493814 MAGI2Q86UL8 1455 aa14.66□□□□□ -0.06
C1orf43-209ENST00000493814 SIGLEC1Q9BZZ2 1709 aa14.66□□□□□ -0.06
C1orf43-209ENST00000493814 MADDQ8WXG6 1647 aa14.64□□□□□ -0.07
C1orf43-209ENST00000493814 KDM5CP41229 1560 aa14.64□□□□□ -0.07
C1orf43-209ENST00000493814 ZNF518AQ6AHZ1 1483 aa14.63□□□□□ -0.07
C1orf43-209ENST00000493814 ABCC1P33527 1531 aa14.63□□□□□ -0.07
C1orf43-209ENST00000493814 HECW2Q9P2P5 1572 aa14.63□□□□□ -0.07
C1orf43-209ENST00000493814 RIMS1Q86UR5 1692 aaKnown RBP14.62□□□□□ -0.07
C1orf43-209ENST00000493814 YEATS2Q9ULM3 1422 aa14.62□□□□□ -0.07
C1orf43-209ENST00000493814 EHBP1L1Q8N3D4 1523 aa14.61□□□□□ -0.07
C1orf43-209ENST00000493814 FER1L4A9Z1Z3 1794 aa14.61□□□□□ -0.07
C1orf43-209ENST00000493814 ARID4BQ4LE39 1312 aaPredicted RBP14.61□□□□□ -0.07
C1orf43-209ENST00000493814 SAMD9LQ8IVG5 1584 aa14.6□□□□□ -0.07
C1orf43-209ENST00000493814 MTUS2Q5JR59 1369 aa14.6□□□□□ -0.07
C1orf43-209ENST00000493814 SUPT6HQ7KZ85 1726 aaKnown RBP14.58□□□□□ -0.07
C1orf43-209ENST00000493814 LOC105371045A0A1W2PR82 267 aa14.58□□□□□ -0.08
C1orf43-209ENST00000493814 ABCA6Q8N139 1617 aa14.58□□□□□ -0.08
C1orf43-209ENST00000493814 PTPRMP28827 1452 aa14.57□□□□□ -0.08
C1orf43-209ENST00000493814 GPATCH8Q9UKJ3 1502 aaKnown RBP14.57□□□□□ -0.08
C1orf43-209ENST00000493814 TIAM1Q13009 1591 aa14.57□□□□□ -0.08
C1orf43-209ENST00000493814 DIP2CQ9Y2E4 1556 aa14.57□□□□□ -0.08
C1orf43-209ENST00000493814 KIDINS220Q9ULH0 1771 aa14.57□□□□□ -0.08
C1orf43-209ENST00000493814 C9orf84Q5VXU9 1444 aa14.57□□□□□ -0.08
C1orf43-209ENST00000493814 ATP10AO60312 1499 aa14.57□□□□□ -0.08
C1orf43-209ENST00000493814 ARHGEF12Q9NZN5 1544 aa14.56□□□□□ -0.08
C1orf43-209ENST00000493814 SYCP2Q9BX26 1530 aa14.56□□□□□ -0.08
C1orf43-209ENST00000493814 REREQ9P2R6 1566 aa14.55□□□□□ -0.08
C1orf43-209ENST00000493814 AFAP1Q8N556 730 aa14.54□□□□□ -0.08
C1orf43-209ENST00000493814 CCNB3Q8WWL7 1395 aa14.54□□□□□ -0.08
C1orf43-209ENST00000493814 VPS8Q8N3P4 1428 aa14.54□□□□□ -0.08
C1orf43-209ENST00000493814 TRAPPC8Q9Y2L5 1435 aa14.54□□□□□ -0.08
C1orf43-209ENST00000493814 MLH3Q9UHC1 1453 aa14.54□□□□□ -0.08
C1orf43-209ENST00000493814 MYT1LQ9UL68 1186 aa14.53□□□□□ -0.08
C1orf43-209ENST00000493814 ZNF777Q9ULD5 760 aaPredicted RBP14.52□□□□□ -0.09
C1orf43-209ENST00000493814 PLEKHH2Q8IVE3 1493 aa14.51□□□□□ -0.09
C1orf43-209ENST00000493814 INO80Q9ULG1 1556 aaPredicted RBP14.49□□□□□ -0.09
C1orf43-209ENST00000493814 CFDP1Q9UEE9 299 aaPredicted RBP14.49□□□□□ -0.09
C1orf43-209ENST00000493814 ATP7AQ04656 1500 aa14.48□□□□□ -0.09
C1orf43-209ENST00000493814 MLECQ14165 292 aa14.48□□□□□ -0.09
C1orf43-209ENST00000493814 NCOA2Q15596 1464 aa14.48□□□□□ -0.09
C1orf43-209ENST00000493814 ADGBQ8N7X0 1667 aa14.48□□□□□ -0.09
C1orf43-209ENST00000493814 KIAA1107Q9UPP5 1409 aa14.48□□□□□ -0.09
C1orf43-209ENST00000493814 AGLP35573 1532 aa14.46□□□□□ -0.09
C1orf43-209ENST00000493814 MAP3K1Q13233 1512 aa14.46□□□□□ -0.09
C1orf43-209ENST00000493814 LRRC9Q6ZRR7 1453 aa14.46□□□□□ -0.09
C1orf43-209ENST00000493814 HNRNPMP52272 730 aaKnown RBP eCLIP14.45□□□□□ -0.1
C1orf43-209ENST00000493814 C3P01024 1663 aa14.44□□□□□ -0.1
C1orf43-209ENST00000493814 PREX1Q8TCU6 1659 aa14.44□□□□□ -0.1
C1orf43-209ENST00000493814 SPAG9O60271 1321 aaKnown RBP14.43□□□□□ -0.1
C1orf43-209ENST00000493814 CAMSAP2Q08AD1 1489 aa14.43□□□□□ -0.1
C1orf43-209ENST00000493814 PLXNC1O60486 1568 aa14.42□□□□□ -0.1
C1orf43-209ENST00000493814 PLPPR3Q6T4P5 718 aa14.41□□□□□ -0.1
C1orf43-209ENST00000493814 LMTK3Q96Q04 1460 aa14.41□□□□□ -0.1
C1orf43-209ENST00000493814 MBD5Q9P267 1494 aa14.41□□□□□ -0.1
C1orf43-209ENST00000493814 MROH2AA6NES4 1674 aa14.41□□□□□ -0.1
C1orf43-209ENST00000493814 ZNF644Q9H582 1327 aaPredicted RBP14.41□□□□□ -0.1
C1orf43-209ENST00000493814 ARHGEF5Q12774 1597 aa14.39□□□□□ -0.11
C1orf43-209ENST00000493814 SETD1BQ9UPS6 1966 aaKnown RBP14.39□□□□□ -0.11
C1orf43-209ENST00000493814 CLTCQ00610 1675 aaKnown RBP14.39□□□□□ -0.11
C1orf43-209ENST00000493814 A2MP01023 1474 aa14.38□□□□□ -0.11
C1orf43-209ENST00000493814 CCDC141Q6ZP82 1450 aa14.38□□□□□ -0.11
C1orf43-209ENST00000493814 RTEL1-TNFRSF6BF6WH68 1400 aa14.36□□□□□ -0.11
C1orf43-209ENST00000493814 KANK4Q5T7N3 995 aaPredicted RBP14.35□□□□□ -0.11
C1orf43-209ENST00000493814 ESF1Q9H501 851 aaKnown RBP14.35□□□□□ -0.11
C1orf43-209ENST00000493814 MYOM3Q5VTT5 1437 aa14.34□□□□□ -0.11
C1orf43-209ENST00000493814 CNTLNQ9NXG0 1405 aa14.34□□□□□ -0.11
C1orf43-209ENST00000493814 APLP2Q06481 763 aa14.34□□□□□ -0.11
C1orf43-209ENST00000493814 CROCC2H7BZ55 1655 aa14.33□□□□□ -0.11
C1orf43-209ENST00000493814 MAST1Q9Y2H9 1570 aa14.33□□□□□ -0.12
C1orf43-209ENST00000493814 MIA2Q96PC5 1412 aa14.32□□□□□ -0.12
C1orf43-209ENST00000493814 CEBPAP49715 358 aaPredicted RBP14.32□□□□□ -0.12
C1orf43-209ENST00000493814 RSPH4AQ5TD94 716 aa14.32□□□□□ -0.12
C1orf43-209ENST00000493814 PTPN23Q9H3S7 1636 aa14.31□□□□□ -0.12
C1orf43-209ENST00000493814 UHRF1BP1Q6BDS2 1440 aa14.29□□□□□ -0.12
C1orf43-209ENST00000493814 HSPA2P54652 639 aa14.28□□□□□ -0.12
C1orf43-209ENST00000493814 DHX29Q7Z478 1369 aaKnown RBP14.28□□□□□ -0.12
C1orf43-209ENST00000493814 STRCQ7RTU9 1775 aa14.27□□□□□ -0.12
C1orf43-209ENST00000493814 EIF2AK4Q9P2K8 1649 aaKnown RBP14.27□□□□□ -0.12
C1orf43-209ENST00000493814 TSPY4P0CV99 314 aa14.27□□□□□ -0.13
C1orf43-209ENST00000493814 TSPY10P0CW01 314 aa14.27□□□□□ -0.13
C1orf43-209ENST00000493814 MYO3AQ8NEV4 1616 aa14.26□□□□□ -0.13
C1orf43-209ENST00000493814 GGT6Q6P531 493 aa14.26□□□□□ -0.13
C1orf43-209ENST00000493814 ZNF142P52746 1687 aaPredicted RBP14.26□□□□□ -0.13
C1orf43-209ENST00000493814 DNMT1P26358 1616 aaKnown RBP14.26□□□□□ -0.13
C1orf43-209ENST00000493814 FAM135AQ9P2D6 1515 aa14.25□□□□□ -0.13
C1orf43-209ENST00000493814 RNF17Q9BXT8 1623 aaKnown RBP14.25□□□□□ -0.13
C1orf43-209ENST00000493814 NPATQ14207 1427 aa14.24□□□□□ -0.13
C1orf43-209ENST00000493814 ZMYM3Q14202 1370 aa14.24□□□□□ -0.13
C1orf43-209ENST00000493814 ZC3H13Q5T200 1668 aaKnown RBP14.24□□□□□ -0.13
C1orf43-209ENST00000493814 KDM5DQ9BY66 1539 aa14.24□□□□□ -0.13
C1orf43-209ENST00000493814 PPP6R1Q9UPN7 881 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms