RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 TTC37Q6PGP7 1564 aa18.46■□□□□ 0.55
CTSA-209ENST00000493522 POGZQ7Z3K3 1410 aa18.45■□□□□ 0.54
CTSA-209ENST00000493522 ZMYM4Q5VZL5 1548 aa18.44■□□□□ 0.54
CTSA-209ENST00000493522 FBXO41Q8TF61 875 aa18.44■□□□□ 0.54
CTSA-209ENST00000493522 KIF14Q15058 1648 aa18.44■□□□□ 0.54
CTSA-209ENST00000493522 MAGI2Q86UL8 1455 aa18.42■□□□□ 0.54
CTSA-209ENST00000493522 LMTK3Q96Q04 1460 aa18.42■□□□□ 0.54
CTSA-209ENST00000493522 ZFYVE16Q7Z3T8 1539 aa18.42■□□□□ 0.54
CTSA-209ENST00000493522 RIMS1Q86UR5 1692 aaKnown RBP18.41■□□□□ 0.54
CTSA-209ENST00000493522 MYO5CQ9NQX4 1742 aa18.4■□□□□ 0.54
CTSA-209ENST00000493522 YEATS2Q9ULM3 1422 aa18.39■□□□□ 0.53
CTSA-209ENST00000493522 TIAM1Q13009 1591 aa18.38■□□□□ 0.53
CTSA-209ENST00000493522 PLCH2O75038 1416 aa18.38■□□□□ 0.53
CTSA-209ENST00000493522 TROQ12816 1431 aaPredicted RBP18.38■□□□□ 0.53
CTSA-209ENST00000493522 CDK11AQ9UQ88 783 aaPredicted RBP18.37■□□□□ 0.53
CTSA-209ENST00000493522 SCAPERQ9BY12 1400 aa18.37■□□□□ 0.53
CTSA-209ENST00000493522 EHBP1L1Q8N3D4 1523 aa18.35■□□□□ 0.53
CTSA-209ENST00000493522 PLPPR3Q6T4P5 718 aa18.33■□□□□ 0.52
CTSA-209ENST00000493522 EFCAB2Q5VUJ9 269 aa18.32■□□□□ 0.52
CTSA-209ENST00000493522 CDC42BPAQ5VT25 1732 aa18.32■□□□□ 0.52
CTSA-209ENST00000493522 SIGLEC1Q9BZZ2 1709 aa18.32■□□□□ 0.52
CTSA-209ENST00000493522 MLECQ14165 292 aa18.31■□□□□ 0.52
CTSA-209ENST00000493522 SUPT6HQ7KZ85 1726 aaKnown RBP18.3■□□□□ 0.52
CTSA-209ENST00000493522 HSPA2P54652 639 aa18.3■□□□□ 0.52
CTSA-209ENST00000493522 C9orf84Q5VXU9 1444 aa18.3■□□□□ 0.52
CTSA-209ENST00000493522 PREX2Q70Z35 1606 aa18.3■□□□□ 0.52
CTSA-209ENST00000493522 FER1L4A9Z1Z3 1794 aa18.3■□□□□ 0.52
CTSA-209ENST00000493522 ATP10AO60312 1499 aa18.29■□□□□ 0.52
CTSA-209ENST00000493522 CDC42BPBQ9Y5S2 1711 aa18.29■□□□□ 0.52
CTSA-209ENST00000493522 MTUS2Q5JR59 1369 aa18.29■□□□□ 0.52
CTSA-209ENST00000493522 MAP3K1Q13233 1512 aa18.28■□□□□ 0.52
CTSA-209ENST00000493522 ITSN2Q9NZM3 1697 aa18.28■□□□□ 0.52
CTSA-209ENST00000493522 ZNF518AQ6AHZ1 1483 aa18.27■□□□□ 0.52
CTSA-209ENST00000493522 SENP3Q9H4L4 574 aaPredicted RBP18.27■□□□□ 0.52
CTSA-209ENST00000493522 ARHGEF12Q9NZN5 1544 aa18.26■□□□□ 0.51
CTSA-209ENST00000493522 ARHGAP5Q13017 1502 aa18.25■□□□□ 0.51
CTSA-209ENST00000493522 LRRC9Q6ZRR7 1453 aa18.23■□□□□ 0.51
CTSA-209ENST00000493522 KDM5CP41229 1560 aa18.22■□□□□ 0.51
CTSA-209ENST00000493522 PHF23Q9BUL5 403 aaPredicted RBP18.22■□□□□ 0.51
CTSA-209ENST00000493522 APLP2Q06481 763 aa18.21■□□□□ 0.51
CTSA-209ENST00000493522 MYT1LQ9UL68 1186 aa18.2■□□□□ 0.5
CTSA-209ENST00000493522 AFAP1Q8N556 730 aa18.19■□□□□ 0.5
CTSA-209ENST00000493522 PREX1Q8TCU6 1659 aa18.18■□□□□ 0.5
CTSA-209ENST00000493522 NCOA2Q15596 1464 aa18.18■□□□□ 0.5
CTSA-209ENST00000493522 CERKQ8TCT0 537 aa18.16■□□□□ 0.5
CTSA-209ENST00000493522 REREQ9P2R6 1566 aa18.16■□□□□ 0.5
CTSA-209ENST00000493522 DIP2CQ9Y2E4 1556 aa18.16■□□□□ 0.5
CTSA-209ENST00000493522 MLH3Q9UHC1 1453 aa18.15■□□□□ 0.5
CTSA-209ENST00000493522 CEBPAP49715 358 aaPredicted RBP18.15■□□□□ 0.5
CTSA-209ENST00000493522 CCNB3Q8WWL7 1395 aa18.15■□□□□ 0.5
CTSA-209ENST00000493522 UHRF1BP1Q6BDS2 1440 aa18.15■□□□□ 0.5
CTSA-209ENST00000493522 GPATCH8Q9UKJ3 1502 aaKnown RBP18.13■□□□□ 0.49
CTSA-209ENST00000493522 SAMD9LQ8IVG5 1584 aa18.13■□□□□ 0.49
CTSA-209ENST00000493522 ABCC1P33527 1531 aa18.13■□□□□ 0.49
CTSA-209ENST00000493522 DMRT2Q9Y5R5 561 aa18.12■□□□□ 0.49
CTSA-209ENST00000493522 ABCA6Q8N139 1617 aa18.12■□□□□ 0.49
CTSA-209ENST00000493522 KANK4Q5T7N3 995 aaPredicted RBP18.11■□□□□ 0.49
CTSA-209ENST00000493522 ESF1Q9H501 851 aaKnown RBP18.11■□□□□ 0.49
CTSA-209ENST00000493522 TRAPPC8Q9Y2L5 1435 aa18.1■□□□□ 0.49
CTSA-209ENST00000493522 AGLP35573 1532 aa18.09■□□□□ 0.49
CTSA-209ENST00000493522 SYCP2Q9BX26 1530 aa18.08■□□□□ 0.48
CTSA-209ENST00000493522 SETD1BQ9UPS6 1966 aaKnown RBP18.07■□□□□ 0.48
CTSA-209ENST00000493522 C3P01024 1663 aa18.05■□□□□ 0.48
CTSA-209ENST00000493522 CNTLNQ9NXG0 1405 aa18.05■□□□□ 0.48
CTSA-209ENST00000493522 CFDP1Q9UEE9 299 aaPredicted RBP18.04■□□□□ 0.48
CTSA-209ENST00000493522 ZNF777Q9ULD5 760 aaPredicted RBP18.04■□□□□ 0.48
CTSA-209ENST00000493522 STRCQ7RTU9 1775 aa18.04■□□□□ 0.48
CTSA-209ENST00000493522 CAMSAP2Q08AD1 1489 aa18.03■□□□□ 0.48
CTSA-209ENST00000493522 PLEKHH2Q8IVE3 1493 aa18.03■□□□□ 0.48
CTSA-209ENST00000493522 KIDINS220Q9ULH0 1771 aa18.03■□□□□ 0.48
CTSA-209ENST00000493522 MYOM3Q5VTT5 1437 aa18.03■□□□□ 0.48
CTSA-209ENST00000493522 PTPN23Q9H3S7 1636 aa18.01■□□□□ 0.47
CTSA-209ENST00000493522 PTPRTO14522 1441 aa18■□□□□ 0.47
CTSA-209ENST00000493522 SPAG9O60271 1321 aaKnown RBP17.98■□□□□ 0.47
CTSA-209ENST00000493522 MIA2Q96PC5 1412 aa17.97■□□□□ 0.47
CTSA-209ENST00000493522 CROCC2H7BZ55 1655 aa17.96■□□□□ 0.47
CTSA-209ENST00000493522 NPATQ14207 1427 aa17.96■□□□□ 0.47
CTSA-209ENST00000493522 KIAA1107Q9UPP5 1409 aa17.96■□□□□ 0.47
CTSA-209ENST00000493522 ARHGEF5Q12774 1597 aa17.96■□□□□ 0.46
CTSA-209ENST00000493522 INO80Q9ULG1 1556 aaPredicted RBP17.96■□□□□ 0.46
CTSA-209ENST00000493522 MROH2AA6NES4 1674 aa17.95■□□□□ 0.46
CTSA-209ENST00000493522 NCOA1Q15788 1441 aa17.95■□□□□ 0.46
CTSA-209ENST00000493522 FGD6Q6ZV73 1430 aa17.95■□□□□ 0.46
CTSA-209ENST00000493522 ATP7AQ04656 1500 aa17.94■□□□□ 0.46
CTSA-209ENST00000493522 HNRNPMP52272 730 aaKnown RBP eCLIP17.94■□□□□ 0.46
CTSA-209ENST00000493522 PPARGC1BQ86YN6 1023 aaKnown RBP17.94■□□□□ 0.46
CTSA-209ENST00000493522 ZNF644Q9H582 1327 aaPredicted RBP17.94■□□□□ 0.46
CTSA-209ENST00000493522 ZMYM3Q14202 1370 aa17.92■□□□□ 0.46
CTSA-209ENST00000493522 CCDC141Q6ZP82 1450 aa17.92■□□□□ 0.46
CTSA-209ENST00000493522 ADGBQ8N7X0 1667 aa17.91■□□□□ 0.46
CTSA-209ENST00000493522 PLXNC1O60486 1568 aa17.91■□□□□ 0.46
CTSA-209ENST00000493522 DNMT1P26358 1616 aaKnown RBP17.9■□□□□ 0.46
CTSA-209ENST00000493522 A2MP01023 1474 aa17.9■□□□□ 0.46
CTSA-209ENST00000493522 MBD5Q9P267 1494 aa17.9■□□□□ 0.46
CTSA-209ENST00000493522 CAMSAP1Q5T5Y3 1602 aa17.9■□□□□ 0.46
CTSA-209ENST00000493522 TCOF1Q13428 1488 aaKnown RBP17.89■□□□□ 0.45
CTSA-209ENST00000493522 IQSEC2Q5JU85 1478 aa17.89■□□□□ 0.45
CTSA-209ENST00000493522 LTBP4Q8N2S1 1624 aa17.89■□□□□ 0.45
CTSA-209ENST00000493522 DISP3Q9P2K9 1392 aa17.89■□□□□ 0.45
CTSA-209ENST00000493522 MAST1Q9Y2H9 1570 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms