RNA–Protein interactions for RNA: ENST00000493498.1

TRIM50-204, Transcript of tripartite motif containing 50, humanhuman

TSL 4

Gene TRIM50, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-204ENST00000493498 SCAPERQ9BY12 1400 aa22.17■■□□□ 1.14
TRIM50-204ENST00000493498 EFCAB2Q5VUJ9 269 aa22.16■■□□□ 1.14
TRIM50-204ENST00000493498 KIF14Q15058 1648 aa22.16■■□□□ 1.14
TRIM50-204ENST00000493498 CLIP1P30622 1438 aa22.15■■□□□ 1.14
TRIM50-204ENST00000493498 YEATS2Q9ULM3 1422 aa22.14■■□□□ 1.13
TRIM50-204ENST00000493498 LMTK3Q96Q04 1460 aa22.13■■□□□ 1.13
TRIM50-204ENST00000493498 TROQ12816 1431 aaPredicted RBP22.13■■□□□ 1.13
TRIM50-204ENST00000493498 EHMT2Q96KQ7 1210 aa22.11■■□□□ 1.13
TRIM50-204ENST00000493498 FER1L4A9Z1Z3 1794 aa22.1■■□□□ 1.13
TRIM50-204ENST00000493498 ATP10AO60312 1499 aa22.09■■□□□ 1.13
TRIM50-204ENST00000493498 ZNF518AQ6AHZ1 1483 aa22.09■■□□□ 1.13
TRIM50-204ENST00000493498 C9orf84Q5VXU9 1444 aa22.08■■□□□ 1.13
TRIM50-204ENST00000493498 FBXO41Q8TF61 875 aa22.08■■□□□ 1.13
TRIM50-204ENST00000493498 ARHGAP5Q13017 1502 aa22.07■■□□□ 1.12
TRIM50-204ENST00000493498 SIGLEC1Q9BZZ2 1709 aa22.06■■□□□ 1.12
TRIM50-204ENST00000493498 CCDC18Q5T9S5 1454 aa22.06■■□□□ 1.12
TRIM50-204ENST00000493498 ARHGEF12Q9NZN5 1544 aa22.03■■□□□ 1.12
TRIM50-204ENST00000493498 KDM5CP41229 1560 aa22.03■■□□□ 1.12
TRIM50-204ENST00000493498 LRRIQ1Q96JM4 1722 aa22.03■■□□□ 1.12
TRIM50-204ENST00000493498 MLECQ14165 292 aa22.02■■□□□ 1.12
TRIM50-204ENST00000493498 CASKIN1Q8WXD9 1431 aa22.01■■□□□ 1.11
TRIM50-204ENST00000493498 CDC42BPBQ9Y5S2 1711 aa21.98■■□□□ 1.11
TRIM50-204ENST00000493498 PLPPR3Q6T4P5 718 aa21.98■■□□□ 1.11
TRIM50-204ENST00000493498 REREQ9P2R6 1566 aa21.98■■□□□ 1.11
TRIM50-204ENST00000493498 PREX2Q70Z35 1606 aa21.98■■□□□ 1.11
TRIM50-204ENST00000493498 MYT1LQ9UL68 1186 aa21.96■■□□□ 1.11
TRIM50-204ENST00000493498 PREX1Q8TCU6 1659 aa21.95■■□□□ 1.1
TRIM50-204ENST00000493498 AFAP1Q8N556 730 aa21.95■■□□□ 1.1
TRIM50-204ENST00000493498 MLH3Q9UHC1 1453 aa21.95■■□□□ 1.1
TRIM50-204ENST00000493498 SETD1BQ9UPS6 1966 aaKnown RBP21.94■■□□□ 1.1
TRIM50-204ENST00000493498 HSPA2P54652 639 aa21.94■■□□□ 1.1
TRIM50-204ENST00000493498 FYCO1Q9BQS8 1478 aa21.94■■□□□ 1.1
TRIM50-204ENST00000493498 ABCC1P33527 1531 aa21.93■■□□□ 1.1
TRIM50-204ENST00000493498 DIP2CQ9Y2E4 1556 aa21.93■■□□□ 1.1
TRIM50-204ENST00000493498 ITSN2Q9NZM3 1697 aa21.91■■□□□ 1.1
TRIM50-204ENST00000493498 AGLP35573 1532 aa21.9■■□□□ 1.1
TRIM50-204ENST00000493498 CDC42BPAQ5VT25 1732 aa21.89■■□□□ 1.09
TRIM50-204ENST00000493498 ABCA6Q8N139 1617 aa21.88■■□□□ 1.09
TRIM50-204ENST00000493498 ESF1Q9H501 851 aaKnown RBP21.86■■□□□ 1.09
TRIM50-204ENST00000493498 UHRF1BP1Q6BDS2 1440 aa21.85■■□□□ 1.09
TRIM50-204ENST00000493498 TRAPPC8Q9Y2L5 1435 aa21.85■■□□□ 1.09
TRIM50-204ENST00000493498 DMRT2Q9Y5R5 561 aa21.84■■□□□ 1.09
TRIM50-204ENST00000493498 KIDINS220Q9ULH0 1771 aa21.82■■□□□ 1.08
TRIM50-204ENST00000493498 CNTLNQ9NXG0 1405 aa21.81■■□□□ 1.08
TRIM50-204ENST00000493498 CEBPAP49715 358 aaPredicted RBP21.81■■□□□ 1.08
TRIM50-204ENST00000493498 C3P01024 1663 aa21.8■■□□□ 1.08
TRIM50-204ENST00000493498 PLEKHH2Q8IVE3 1493 aa21.79■■□□□ 1.08
TRIM50-204ENST00000493498 CERKQ8TCT0 537 aa21.79■■□□□ 1.08
TRIM50-204ENST00000493498 SAMD9LQ8IVG5 1584 aa21.78■■□□□ 1.08
TRIM50-204ENST00000493498 GPATCH8Q9UKJ3 1502 aaKnown RBP21.77■■□□□ 1.08
TRIM50-204ENST00000493498 KIAA1107Q9UPP5 1409 aa21.76■■□□□ 1.07
TRIM50-204ENST00000493498 SYCP2Q9BX26 1530 aa21.75■■□□□ 1.07
TRIM50-204ENST00000493498 ZNF777Q9ULD5 760 aaPredicted RBP21.75■■□□□ 1.07
TRIM50-204ENST00000493498 SPAG9O60271 1321 aaKnown RBP21.75■■□□□ 1.07
TRIM50-204ENST00000493498 STRCQ7RTU9 1775 aa21.74■■□□□ 1.07
TRIM50-204ENST00000493498 MROH2AA6NES4 1674 aa21.73■■□□□ 1.07
TRIM50-204ENST00000493498 CCNB3Q8WWL7 1395 aa21.73■■□□□ 1.07
TRIM50-204ENST00000493498 CFDP1Q9UEE9 299 aaPredicted RBP21.72■■□□□ 1.07
TRIM50-204ENST00000493498 MTUS2Q5JR59 1369 aa21.72■■□□□ 1.07
TRIM50-204ENST00000493498 ATP7AQ04656 1500 aa21.7■■□□□ 1.07
TRIM50-204ENST00000493498 PTPRTO14522 1441 aa21.7■■□□□ 1.06
TRIM50-204ENST00000493498 NPATQ14207 1427 aa21.69■■□□□ 1.06
TRIM50-204ENST00000493498 INO80Q9ULG1 1556 aaPredicted RBP21.68■■□□□ 1.06
TRIM50-204ENST00000493498 SUPT6HQ7KZ85 1726 aaKnown RBP21.67■■□□□ 1.06
TRIM50-204ENST00000493498 HNRNPMP52272 730 aaKnown RBP eCLIP21.67■■□□□ 1.06
TRIM50-204ENST00000493498 PLXNC1O60486 1568 aa21.65■■□□□ 1.06
TRIM50-204ENST00000493498 EHBP1L1Q8N3D4 1523 aa21.65■■□□□ 1.06
TRIM50-204ENST00000493498 A2MP01023 1474 aa21.65■■□□□ 1.06
TRIM50-204ENST00000493498 ADGBQ8N7X0 1667 aa21.63■■□□□ 1.05
TRIM50-204ENST00000493498 ZMYM3Q14202 1370 aa21.62■■□□□ 1.05
TRIM50-204ENST00000493498 PPP6R1Q9UPN7 881 aa21.62■■□□□ 1.05
TRIM50-204ENST00000493498 NCOA1Q15788 1441 aa21.61■■□□□ 1.05
TRIM50-204ENST00000493498 TIAM1Q13009 1591 aa21.61■■□□□ 1.05
TRIM50-204ENST00000493498 CEP162Q5TB80 1403 aa21.6■■□□□ 1.05
TRIM50-204ENST00000493498 CLTCQ00610 1675 aaKnown RBP21.6■■□□□ 1.05
TRIM50-204ENST00000493498 RTEL1-TNFRSF6BF6WH68 1400 aa21.57■■□□□ 1.04
TRIM50-204ENST00000493498 IQSEC2Q5JU85 1478 aa21.56■■□□□ 1.04
TRIM50-204ENST00000493498 ZNF142P52746 1687 aaPredicted RBP21.56■■□□□ 1.04
TRIM50-204ENST00000493498 CAMSAP1Q5T5Y3 1602 aa21.55■■□□□ 1.04
TRIM50-204ENST00000493498 MBD5Q9P267 1494 aa21.54■■□□□ 1.04
TRIM50-204ENST00000493498 GGT6Q6P531 493 aa21.54■■□□□ 1.04
TRIM50-204ENST00000493498 MYO3AQ8NEV4 1616 aa21.54■■□□□ 1.04
TRIM50-204ENST00000493498 RSPH4AQ5TD94 716 aa21.53■■□□□ 1.04
TRIM50-204ENST00000493498 PLA2R1Q13018 1463 aa21.52■■□□□ 1.04
TRIM50-204ENST00000493498 PTPRKQ15262 1439 aa21.52■■□□□ 1.04
TRIM50-204ENST00000493498 LTBP4Q8N2S1 1624 aa21.51■■□□□ 1.03
TRIM50-204ENST00000493498 FAM135AQ9P2D6 1515 aa21.5■■□□□ 1.03
TRIM50-204ENST00000493498 CEP170BQ9Y4F5 1589 aaPredicted RBP21.5■■□□□ 1.03
TRIM50-204ENST00000493498 PKD2Q13563 968 aa21.5■■□□□ 1.03
TRIM50-204ENST00000493498 ZNF644Q9H582 1327 aaPredicted RBP21.5■■□□□ 1.03
TRIM50-204ENST00000493498 DHX29Q7Z478 1369 aaKnown RBP21.49■■□□□ 1.03
TRIM50-204ENST00000493498 CCDC141Q6ZP82 1450 aa21.49■■□□□ 1.03
TRIM50-204ENST00000493498 NCOA2Q15596 1464 aa21.47■■□□□ 1.03
TRIM50-204ENST00000493498 LOC105371045A0A1W2PR82 267 aa21.47■■□□□ 1.03
TRIM50-204ENST00000493498 CAMSAP2Q08AD1 1489 aa21.45■■□□□ 1.03
TRIM50-204ENST00000493498 TCOF1Q13428 1488 aaKnown RBP21.44■■□□□ 1.02
TRIM50-204ENST00000493498 A2ML1A8K2U0 1454 aa21.43■■□□□ 1.02
TRIM50-204ENST00000493498 ARHGEF5Q12774 1597 aa21.42■■□□□ 1.02
TRIM50-204ENST00000493498 NCKAP5LQ9HCH0 1330 aa21.42■■□□□ 1.02
TRIM50-204ENST00000493498 KDM5DQ9BY66 1539 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms