RNA–Protein interactions for RNA: ENST00000493298.1

TM4SF1-203, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 4

Gene TM4SF1, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-203ENST00000493298 BCORL1Q5H9F3 1711 aa14.46□□□□□ -0.09
TM4SF1-203ENST00000493298 KDM5CP41229 1560 aa14.46□□□□□ -0.09
TM4SF1-203ENST00000493298 DENND4BO75064 1496 aaPredicted RBP14.45□□□□□ -0.1
TM4SF1-203ENST00000493298 POGZQ7Z3K3 1410 aa14.45□□□□□ -0.1
TM4SF1-203ENST00000493298 ITSN2Q9NZM3 1697 aa14.44□□□□□ -0.1
TM4SF1-203ENST00000493298 ARHGEF12Q9NZN5 1544 aa14.44□□□□□ -0.1
TM4SF1-203ENST00000493298 VPS8Q8N3P4 1428 aa14.43□□□□□ -0.1
TM4SF1-203ENST00000493298 ABCC1P33527 1531 aa14.43□□□□□ -0.1
TM4SF1-203ENST00000493298 AEBP2Q6ZN18 517 aaPredicted RBP14.43□□□□□ -0.1
TM4SF1-203ENST00000493298 YEATS2Q9ULM3 1422 aa14.42□□□□□ -0.1
TM4SF1-203ENST00000493298 SAMD9LQ8IVG5 1584 aa14.41□□□□□ -0.1
TM4SF1-203ENST00000493298 ZFYVE16Q7Z3T8 1539 aa14.4□□□□□ -0.1
TM4SF1-203ENST00000493298 SCAPERQ9BY12 1400 aa14.4□□□□□ -0.1
TM4SF1-203ENST00000493298 MAGI2Q86UL8 1455 aa14.39□□□□□ -0.11
TM4SF1-203ENST00000493298 MADDQ8WXG6 1647 aa14.39□□□□□ -0.11
TM4SF1-203ENST00000493298 ARHGAP5Q13017 1502 aa14.39□□□□□ -0.11
TM4SF1-203ENST00000493298 GPATCH8Q9UKJ3 1502 aaKnown RBP14.39□□□□□ -0.11
TM4SF1-203ENST00000493298 KIDINS220Q9ULH0 1771 aa14.38□□□□□ -0.11
TM4SF1-203ENST00000493298 ATP1B4Q9UN42 357 aaPredicted RBP14.38□□□□□ -0.11
TM4SF1-203ENST00000493298 TIAM1Q13009 1591 aa14.38□□□□□ -0.11
TM4SF1-203ENST00000493298 ABCA6Q8N139 1617 aa14.37□□□□□ -0.11
TM4SF1-203ENST00000493298 CDK11AQ9UQ88 783 aaPredicted RBP14.37□□□□□ -0.11
TM4SF1-203ENST00000493298 DIP2CQ9Y2E4 1556 aa14.37□□□□□ -0.11
TM4SF1-203ENST00000493298 HECW2Q9P2P5 1572 aa14.36□□□□□ -0.11
TM4SF1-203ENST00000493298 ZNF518AQ6AHZ1 1483 aa14.35□□□□□ -0.11
TM4SF1-203ENST00000493298 REREQ9P2R6 1566 aa14.34□□□□□ -0.11
TM4SF1-203ENST00000493298 TRAPPC8Q9Y2L5 1435 aa14.34□□□□□ -0.11
TM4SF1-203ENST00000493298 EHBP1L1Q8N3D4 1523 aa14.34□□□□□ -0.11
TM4SF1-203ENST00000493298 RIMS1Q86UR5 1692 aaKnown RBP14.33□□□□□ -0.11
TM4SF1-203ENST00000493298 EFCAB2Q5VUJ9 269 aa14.33□□□□□ -0.12
TM4SF1-203ENST00000493298 PTPRMP28827 1452 aa14.32□□□□□ -0.12
TM4SF1-203ENST00000493298 MLH3Q9UHC1 1453 aa14.32□□□□□ -0.12
TM4SF1-203ENST00000493298 FER1L4A9Z1Z3 1794 aa14.32□□□□□ -0.12
TM4SF1-203ENST00000493298 SYCP2Q9BX26 1530 aa14.31□□□□□ -0.12
TM4SF1-203ENST00000493298 KANK4Q5T7N3 995 aaPredicted RBP14.31□□□□□ -0.12
TM4SF1-203ENST00000493298 ATP10AO60312 1499 aa14.31□□□□□ -0.12
TM4SF1-203ENST00000493298 INO80Q9ULG1 1556 aaPredicted RBP14.3□□□□□ -0.12
TM4SF1-203ENST00000493298 AFAP1Q8N556 730 aa14.3□□□□□ -0.12
TM4SF1-203ENST00000493298 PPARGC1BQ86YN6 1023 aaKnown RBP14.29□□□□□ -0.12
TM4SF1-203ENST00000493298 MAP3K1Q13233 1512 aa14.28□□□□□ -0.12
TM4SF1-203ENST00000493298 SUPT6HQ7KZ85 1726 aaKnown RBP14.28□□□□□ -0.12
TM4SF1-203ENST00000493298 MBD5Q9P267 1494 aa14.27□□□□□ -0.12
TM4SF1-203ENST00000493298 C9orf84Q5VXU9 1444 aa14.27□□□□□ -0.12
TM4SF1-203ENST00000493298 PLXNC1O60486 1568 aa14.26□□□□□ -0.13
TM4SF1-203ENST00000493298 KIAA1107Q9UPP5 1409 aa14.26□□□□□ -0.13
TM4SF1-203ENST00000493298 AGLP35573 1532 aa14.25□□□□□ -0.13
TM4SF1-203ENST00000493298 NCOA2Q15596 1464 aa14.25□□□□□ -0.13
TM4SF1-203ENST00000493298 LRRC9Q6ZRR7 1453 aa14.25□□□□□ -0.13
TM4SF1-203ENST00000493298 MTUS2Q5JR59 1369 aa14.24□□□□□ -0.13
TM4SF1-203ENST00000493298 ADGBQ8N7X0 1667 aa14.23□□□□□ -0.13
TM4SF1-203ENST00000493298 ATP7AQ04656 1500 aa14.22□□□□□ -0.13
TM4SF1-203ENST00000493298 LMTK3Q96Q04 1460 aa14.22□□□□□ -0.13
TM4SF1-203ENST00000493298 ZNF644Q9H582 1327 aaPredicted RBP14.21□□□□□ -0.13
TM4SF1-203ENST00000493298 CCNB3Q8WWL7 1395 aa14.21□□□□□ -0.14
TM4SF1-203ENST00000493298 C3P01024 1663 aa14.2□□□□□ -0.14
TM4SF1-203ENST00000493298 PLEKHH2Q8IVE3 1493 aa14.2□□□□□ -0.14
TM4SF1-203ENST00000493298 CAMSAP2Q08AD1 1489 aa14.18□□□□□ -0.14
TM4SF1-203ENST00000493298 ARHGEF5Q12774 1597 aa14.17□□□□□ -0.14
TM4SF1-203ENST00000493298 SETD1BQ9UPS6 1966 aaKnown RBP14.17□□□□□ -0.14
TM4SF1-203ENST00000493298 HNRNPMP52272 730 aaKnown RBP eCLIP14.17□□□□□ -0.14
TM4SF1-203ENST00000493298 CFDP1Q9UEE9 299 aaPredicted RBP14.17□□□□□ -0.14
TM4SF1-203ENST00000493298 MROH2AA6NES4 1674 aa14.16□□□□□ -0.14
TM4SF1-203ENST00000493298 ARID4BQ4LE39 1312 aaPredicted RBP14.15□□□□□ -0.14
TM4SF1-203ENST00000493298 PREX1Q8TCU6 1659 aa14.15□□□□□ -0.14
TM4SF1-203ENST00000493298 ZNF777Q9ULD5 760 aaPredicted RBP14.13□□□□□ -0.15
TM4SF1-203ENST00000493298 MAST1Q9Y2H9 1570 aa14.13□□□□□ -0.15
TM4SF1-203ENST00000493298 CROCC2H7BZ55 1655 aa14.12□□□□□ -0.15
TM4SF1-203ENST00000493298 RTEL1-TNFRSF6BF6WH68 1400 aa14.12□□□□□ -0.15
TM4SF1-203ENST00000493298 CCDC141Q6ZP82 1450 aa14.12□□□□□ -0.15
TM4SF1-203ENST00000493298 CLTCQ00610 1675 aaKnown RBP14.11□□□□□ -0.15
TM4SF1-203ENST00000493298 STRCQ7RTU9 1775 aa14.11□□□□□ -0.15
TM4SF1-203ENST00000493298 A2MP01023 1474 aa14.11□□□□□ -0.15
TM4SF1-203ENST00000493298 SPAG9O60271 1321 aaKnown RBP14.11□□□□□ -0.15
TM4SF1-203ENST00000493298 MYOM3Q5VTT5 1437 aa14.1□□□□□ -0.15
TM4SF1-203ENST00000493298 MLECQ14165 292 aa14.09□□□□□ -0.15
TM4SF1-203ENST00000493298 MIA2Q96PC5 1412 aa14.07□□□□□ -0.16
TM4SF1-203ENST00000493298 MROH1Q8NDA8 1641 aa14.06□□□□□ -0.16
TM4SF1-203ENST00000493298 RNF17Q9BXT8 1623 aaKnown RBP14.06□□□□□ -0.16
TM4SF1-203ENST00000493298 PTPN23Q9H3S7 1636 aa14.06□□□□□ -0.16
TM4SF1-203ENST00000493298 CEBPAP49715 358 aaPredicted RBP14.06□□□□□ -0.16
TM4SF1-203ENST00000493298 TCOF1Q13428 1488 aaKnown RBP14.05□□□□□ -0.16
TM4SF1-203ENST00000493298 DNMT1P26358 1616 aaKnown RBP14.04□□□□□ -0.16
TM4SF1-203ENST00000493298 ZNF142P52746 1687 aaPredicted RBP14.04□□□□□ -0.16
TM4SF1-203ENST00000493298 APLP2Q06481 763 aa14.03□□□□□ -0.16
TM4SF1-203ENST00000493298 DHX29Q7Z478 1369 aaKnown RBP14.03□□□□□ -0.16
TM4SF1-203ENST00000493298 EIF2AK4Q9P2K8 1649 aaKnown RBP14.02□□□□□ -0.16
TM4SF1-203ENST00000493298 CNTLNQ9NXG0 1405 aa14.02□□□□□ -0.16
TM4SF1-203ENST00000493298 FGD6Q6ZV73 1430 aa14.01□□□□□ -0.17
TM4SF1-203ENST00000493298 RRBP1Q9P2E9 1410 aaKnown RBP14.01□□□□□ -0.17
TM4SF1-203ENST00000493298 MYO3AQ8NEV4 1616 aa14.01□□□□□ -0.17
TM4SF1-203ENST00000493298 FAM135AQ9P2D6 1515 aa14□□□□□ -0.17
TM4SF1-203ENST00000493298 SHANK2Q9UPX8 1470 aa14□□□□□ -0.17
TM4SF1-203ENST00000493298 ABCC5O15440 1437 aa14□□□□□ -0.17
TM4SF1-203ENST00000493298 HSPA2P54652 639 aa14□□□□□ -0.17
TM4SF1-203ENST00000493298 NPATQ14207 1427 aa13.99□□□□□ -0.17
TM4SF1-203ENST00000493298 PTPRKQ15262 1439 aa13.99□□□□□ -0.17
TM4SF1-203ENST00000493298 DEPDC5O75140 1603 aa13.99□□□□□ -0.17
TM4SF1-203ENST00000493298 ZMYM3Q14202 1370 aa13.98□□□□□ -0.17
TM4SF1-203ENST00000493298 RSPH4AQ5TD94 716 aa13.98□□□□□ -0.17
TM4SF1-203ENST00000493298 TRIM26Q12899 539 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms