RNA–Protein interactions for RNA: ENST00000492774.1

ATP13A1-211, Transcript of ATPase 13A1, humanhuman

TSL 4

Gene ATP13A1, Length 482 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1-211ENST00000492774 PLEKHD1A6NEE1 506 aa18.64■□□□□ 0.57
ATP13A1-211ENST00000492774 CERKQ8TCT0 537 aa18.63■□□□□ 0.57
ATP13A1-211ENST00000492774 HECW1Q76N89 1606 aa18.63■□□□□ 0.57
ATP13A1-211ENST00000492774 CEP162Q5TB80 1403 aa18.61■□□□□ 0.57
ATP13A1-211ENST00000492774 CDK13Q14004 1512 aaKnown RBP18.59■□□□□ 0.57
ATP13A1-211ENST00000492774 CLIP1P30622 1438 aa18.58■□□□□ 0.57
ATP13A1-211ENST00000492774 MAGI2Q86UL8 1455 aa18.57■□□□□ 0.56
ATP13A1-211ENST00000492774 SCAPERQ9BY12 1400 aa18.56■□□□□ 0.56
ATP13A1-211ENST00000492774 PREX1Q8TCU6 1659 aa18.55■□□□□ 0.56
ATP13A1-211ENST00000492774 ARHGEF12Q9NZN5 1544 aa18.54■□□□□ 0.56
ATP13A1-211ENST00000492774 ARHGAP35Q9NRY4 1499 aa18.53■□□□□ 0.56
ATP13A1-211ENST00000492774 CEBPAP49715 358 aaPredicted RBP18.52■□□□□ 0.56
ATP13A1-211ENST00000492774 C9orf84Q5VXU9 1444 aa18.51■□□□□ 0.55
ATP13A1-211ENST00000492774 DISP3Q9P2K9 1392 aa18.51■□□□□ 0.55
ATP13A1-211ENST00000492774 ATP10AO60312 1499 aa18.51■□□□□ 0.55
ATP13A1-211ENST00000492774 PLCH2O75038 1416 aa18.5■□□□□ 0.55
ATP13A1-211ENST00000492774 ILDR2Q71H61 639 aa18.49■□□□□ 0.55
ATP13A1-211ENST00000492774 STRCQ7RTU9 1775 aa18.49■□□□□ 0.55
ATP13A1-211ENST00000492774 MYO5CQ9NQX4 1742 aa18.49■□□□□ 0.55
ATP13A1-211ENST00000492774 KIF14Q15058 1648 aa18.45■□□□□ 0.54
ATP13A1-211ENST00000492774 ATP1B4Q9UN42 357 aaPredicted RBP18.44■□□□□ 0.54
ATP13A1-211ENST00000492774 UHRF1BP1Q6BDS2 1440 aa18.43■□□□□ 0.54
ATP13A1-211ENST00000492774 FMN1Q68DA7 1419 aa18.41■□□□□ 0.54
ATP13A1-211ENST00000492774 ZNF518AQ6AHZ1 1483 aa18.41■□□□□ 0.54
ATP13A1-211ENST00000492774 ARHGAP5Q13017 1502 aa18.41■□□□□ 0.54
ATP13A1-211ENST00000492774 EFCAB2Q5VUJ9 269 aa18.41■□□□□ 0.54
ATP13A1-211ENST00000492774 KDM5CP41229 1560 aa18.4■□□□□ 0.54
ATP13A1-211ENST00000492774 SPATA31D1Q6ZQQ2 1576 aa18.4■□□□□ 0.54
ATP13A1-211ENST00000492774 DIP2CQ9Y2E4 1556 aa18.4■□□□□ 0.54
ATP13A1-211ENST00000492774 MYT1LQ9UL68 1186 aa18.4■□□□□ 0.54
ATP13A1-211ENST00000492774 SOCS7O14512 581 aa18.39■□□□□ 0.53
ATP13A1-211ENST00000492774 AFAP1Q8N556 730 aa18.39■□□□□ 0.53
ATP13A1-211ENST00000492774 DMRT2Q9Y5R5 561 aa18.38■□□□□ 0.53
ATP13A1-211ENST00000492774 VPS8Q8N3P4 1428 aa18.38■□□□□ 0.53
ATP13A1-211ENST00000492774 ABCA6Q8N139 1617 aa18.38■□□□□ 0.53
ATP13A1-211ENST00000492774 C3P01024 1663 aa18.38■□□□□ 0.53
ATP13A1-211ENST00000492774 SETD1BQ9UPS6 1966 aaKnown RBP18.34■□□□□ 0.53
ATP13A1-211ENST00000492774 TROQ12816 1431 aaPredicted RBP18.33■□□□□ 0.53
ATP13A1-211ENST00000492774 LRRIQ1Q96JM4 1722 aa18.33■□□□□ 0.52
ATP13A1-211ENST00000492774 REREQ9P2R6 1566 aa18.33■□□□□ 0.52
ATP13A1-211ENST00000492774 PTPRTO14522 1441 aa18.32■□□□□ 0.52
ATP13A1-211ENST00000492774 CDC42BPBQ9Y5S2 1711 aa18.32■□□□□ 0.52
ATP13A1-211ENST00000492774 CASKIN1Q8WXD9 1431 aa18.32■□□□□ 0.52
ATP13A1-211ENST00000492774 LTBP4Q8N2S1 1624 aa18.31■□□□□ 0.52
ATP13A1-211ENST00000492774 CDK11AQ9UQ88 783 aaPredicted RBP18.31■□□□□ 0.52
ATP13A1-211ENST00000492774 ABCC1P33527 1531 aa18.28■□□□□ 0.52
ATP13A1-211ENST00000492774 MLH3Q9UHC1 1453 aa18.28■□□□□ 0.52
ATP13A1-211ENST00000492774 ESF1Q9H501 851 aaKnown RBP18.28■□□□□ 0.52
ATP13A1-211ENST00000492774 TRAPPC8Q9Y2L5 1435 aa18.28■□□□□ 0.52
ATP13A1-211ENST00000492774 ITSN2Q9NZM3 1697 aa18.28■□□□□ 0.52
ATP13A1-211ENST00000492774 PREX2Q70Z35 1606 aa18.27■□□□□ 0.52
ATP13A1-211ENST00000492774 FYCO1Q9BQS8 1478 aa18.27■□□□□ 0.52
ATP13A1-211ENST00000492774 NCOA1Q15788 1441 aa18.27■□□□□ 0.52
ATP13A1-211ENST00000492774 AGLP35573 1532 aa18.27■□□□□ 0.51
ATP13A1-211ENST00000492774 KIDINS220Q9ULH0 1771 aa18.24■□□□□ 0.51
ATP13A1-211ENST00000492774 CAMSAP1Q5T5Y3 1602 aa18.23■□□□□ 0.51
ATP13A1-211ENST00000492774 MAP3K1Q13233 1512 aa18.22■□□□□ 0.51
ATP13A1-211ENST00000492774 IQSEC2Q5JU85 1478 aa18.21■□□□□ 0.51
ATP13A1-211ENST00000492774 CNTLNQ9NXG0 1405 aa18.2■□□□□ 0.5
ATP13A1-211ENST00000492774 CDC42BPAQ5VT25 1732 aa18.19■□□□□ 0.5
ATP13A1-211ENST00000492774 APLP2Q06481 763 aa18.18■□□□□ 0.5
ATP13A1-211ENST00000492774 CCDC18Q5T9S5 1454 aa18.18■□□□□ 0.5
ATP13A1-211ENST00000492774 ZNF335Q9H4Z2 1342 aaPredicted RBP18.18■□□□□ 0.5
ATP13A1-211ENST00000492774 MROH2AA6NES4 1674 aa18.17■□□□□ 0.5
ATP13A1-211ENST00000492774 SUPT6HQ7KZ85 1726 aaKnown RBP18.17■□□□□ 0.5
ATP13A1-211ENST00000492774 NCKAP5LQ9HCH0 1330 aa18.17■□□□□ 0.5
ATP13A1-211ENST00000492774 SAMD9LQ8IVG5 1584 aa18.17■□□□□ 0.5
ATP13A1-211ENST00000492774 SYCP2Q9BX26 1530 aa18.15■□□□□ 0.5
ATP13A1-211ENST00000492774 MYO3AQ8NEV4 1616 aa18.15■□□□□ 0.5
ATP13A1-211ENST00000492774 CLTCQ00610 1675 aaKnown RBP18.15■□□□□ 0.5
ATP13A1-211ENST00000492774 NPATQ14207 1427 aa18.15■□□□□ 0.5
ATP13A1-211ENST00000492774 UBAP1LF5GYI3 381 aa18.14■□□□□ 0.49
ATP13A1-211ENST00000492774 ZNF777Q9ULD5 760 aaPredicted RBP18.14■□□□□ 0.49
ATP13A1-211ENST00000492774 ZMYM3Q14202 1370 aa18.13■□□□□ 0.49
ATP13A1-211ENST00000492774 ZNF142P52746 1687 aaPredicted RBP18.12■□□□□ 0.49
ATP13A1-211ENST00000492774 TIAM1Q13009 1591 aa18.1■□□□□ 0.49
ATP13A1-211ENST00000492774 CEP170BQ9Y4F5 1589 aaPredicted RBP18.1■□□□□ 0.49
ATP13A1-211ENST00000492774 ATP7AQ04656 1500 aa18.09■□□□□ 0.49
ATP13A1-211ENST00000492774 SPAG9O60271 1321 aaKnown RBP18.09■□□□□ 0.49
ATP13A1-211ENST00000492774 HNRNPMP52272 730 aaKnown RBP eCLIP18.07■□□□□ 0.48
ATP13A1-211ENST00000492774 PLXNC1O60486 1568 aa18.07■□□□□ 0.48
ATP13A1-211ENST00000492774 INO80Q9ULG1 1556 aaPredicted RBP18.07■□□□□ 0.48
ATP13A1-211ENST00000492774 PLA2R1Q13018 1463 aa18.07■□□□□ 0.48
ATP13A1-211ENST00000492774 TCOF1Q13428 1488 aaKnown RBP18.06■□□□□ 0.48
ATP13A1-211ENST00000492774 LRRC9Q6ZRR7 1453 aa18.06■□□□□ 0.48
ATP13A1-211ENST00000492774 PTPRKQ15262 1439 aa18.06■□□□□ 0.48
ATP13A1-211ENST00000492774 GPATCH8Q9UKJ3 1502 aaKnown RBP18.05■□□□□ 0.48
ATP13A1-211ENST00000492774 A2MP01023 1474 aa18.05■□□□□ 0.48
ATP13A1-211ENST00000492774 KANK4Q5T7N3 995 aaPredicted RBP18.04■□□□□ 0.48
ATP13A1-211ENST00000492774 PKD2Q13563 968 aa18.03■□□□□ 0.48
ATP13A1-211ENST00000492774 GGT6Q6P531 493 aa18.03■□□□□ 0.48
ATP13A1-211ENST00000492774 SCAF1Q9H7N4 1312 aaKnown RBP18.02■□□□□ 0.48
ATP13A1-211ENST00000492774 PPP6R1Q9UPN7 881 aa18.02■□□□□ 0.48
ATP13A1-211ENST00000492774 MTUS2Q5JR59 1369 aa18.02■□□□□ 0.47
ATP13A1-211ENST00000492774 MED1Q15648 1581 aaPredicted RBP18■□□□□ 0.47
ATP13A1-211ENST00000492774 PIP4K2BP78356 416 aa17.99■□□□□ 0.47
ATP13A1-211ENST00000492774 EHBP1L1Q8N3D4 1523 aa17.98■□□□□ 0.47
ATP13A1-211ENST00000492774 DNMT1P26358 1616 aaKnown RBP17.98■□□□□ 0.47
ATP13A1-211ENST00000492774 HSPA1LP34931 641 aa17.98■□□□□ 0.47
ATP13A1-211ENST00000492774 CFDP1Q9UEE9 299 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms