RNA–Protein interactions for RNA: ENST00000492774.1

ATP13A1-211, Transcript of ATPase 13A1, humanhuman

TSL 4

Gene ATP13A1, Length 482 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1-211ENST00000492774 NISCHQ9Y2I1 1504 aa28.11■■■□□ 2.09
ATP13A1-211ENST00000492774 ABCC9O60706 1549 aa25.86■■□□□ 1.73
ATP13A1-211ENST00000492774 CCDC180Q9P1Z9 1646 aa25.4■■□□□ 1.66
ATP13A1-211ENST00000492774 DNAJC5BQ9UF47 199 aa24.57■■□□□ 1.52
ATP13A1-211ENST00000492774 RB1CC1Q8TDY2 1594 aa24.37■■□□□ 1.49
ATP13A1-211ENST00000492774 NACADO15069 1562 aa24.08■■□□□ 1.44
ATP13A1-211ENST00000492774 PABPN1Q86U42 306 aaKnown RBP eCLIP24■■□□□ 1.43
ATP13A1-211ENST00000492774 DCAF8L2P0C7V8 631 aa23.94■■□□□ 1.42
ATP13A1-211ENST00000492774 UNC13AQ9UPW8 1703 aa23.88■■□□□ 1.41
ATP13A1-211ENST00000492774 BICRAQ9NZM4 1560 aa23.7■■□□□ 1.38
ATP13A1-211ENST00000492774 MYO15BQ96JP2 1530 aa23.55■■□□□ 1.36
ATP13A1-211ENST00000492774 CC2D2AQ9P2K1 1620 aa23.31■■□□□ 1.32
ATP13A1-211ENST00000492774 CECR2Q9BXF3 1484 aa23.3■■□□□ 1.32
ATP13A1-211ENST00000492774 SHROOM4Q9ULL8 1493 aa23.24■■□□□ 1.31
ATP13A1-211ENST00000492774 ZCCHC6Q5VYS8 1495 aaKnown RBP23.23■■□□□ 1.31
ATP13A1-211ENST00000492774 SCRIBQ14160 1630 aa23.21■■□□□ 1.31
ATP13A1-211ENST00000492774 EIF4G1Q04637 1599 aaKnown RBP23.15■■□□□ 1.3
ATP13A1-211ENST00000492774 DCAF1Q9Y4B6 1507 aa23.13■■□□□ 1.29
ATP13A1-211ENST00000492774 DNAJC5Q9H3Z4 198 aa22.79■■□□□ 1.24
ATP13A1-211ENST00000492774 CUX2O14529 1486 aa22.36■■□□□ 1.17
ATP13A1-211ENST00000492774 ERCC6Q03468 1493 aa22.33■■□□□ 1.16
ATP13A1-211ENST00000492774 NCAPD3P42695 1498 aa22.22■■□□□ 1.15
ATP13A1-211ENST00000492774 ATAD2BQ9ULI0 1458 aa22.14■■□□□ 1.13
ATP13A1-211ENST00000492774 NESP48681 1621 aa22.1■■□□□ 1.13
ATP13A1-211ENST00000492774 HMGXB3Q12766 1538 aa22.05■■□□□ 1.12
ATP13A1-211ENST00000492774 SMARCA4P51532 1647 aa22.04■■□□□ 1.12
ATP13A1-211ENST00000492774 SMARCA2P51531 1590 aa22.04■■□□□ 1.12
ATP13A1-211ENST00000492774 THOC2Q8NI27 1593 aaKnown RBP21.95■■□□□ 1.1
ATP13A1-211ENST00000492774 BAZ1BQ9UIG0 1483 aaKnown RBP21.92■■□□□ 1.1
ATP13A1-211ENST00000492774 BAZ1AQ9NRL2 1556 aaPredicted RBP21.84■■□□□ 1.09
ATP13A1-211ENST00000492774 LAMC3Q9Y6N6 1575 aa21.81■■□□□ 1.08
ATP13A1-211ENST00000492774 KIF21AQ7Z4S6 1674 aa21.81■■□□□ 1.08
ATP13A1-211ENST00000492774 PEG3Q9GZU2 1588 aa21.78■■□□□ 1.08
ATP13A1-211ENST00000492774 TRIM41Q8WV44 630 aa21.73■■□□□ 1.07
ATP13A1-211ENST00000492774 MROH2BQ7Z745 1585 aa21.7■■□□□ 1.06
ATP13A1-211ENST00000492774 PDS5BQ9NTI5 1447 aa21.68■■□□□ 1.06
ATP13A1-211ENST00000492774 MRC2Q9UBG0 1479 aa21.56■■□□□ 1.04
ATP13A1-211ENST00000492774 CADPSQ9ULU8 1353 aa21.54■■□□□ 1.04
ATP13A1-211ENST00000492774 WDR62O43379 1518 aa21.52■■□□□ 1.04
ATP13A1-211ENST00000492774 WIZO95785 1651 aa21.44■■□□□ 1.02
ATP13A1-211ENST00000492774 CEP164Q9UPV0 1460 aa21.4■■□□□ 1.02
ATP13A1-211ENST00000492774 FANCD2Q9BXW9 1451 aa21.34■■□□□ 1.01
ATP13A1-211ENST00000492774 OSCARQ8IYS5 282 aa21.25■□□□□ 0.99
ATP13A1-211ENST00000492774 CFTRP13569 1480 aa21.21■□□□□ 0.99
ATP13A1-211ENST00000492774 URB2Q14146 1524 aaKnown RBP21.21■□□□□ 0.99
ATP13A1-211ENST00000492774 RIMBP3CA6NJZ7 1639 aa21.11■□□□□ 0.97
ATP13A1-211ENST00000492774 RIMBP3BA6NNM3 1639 aa21.11■□□□□ 0.97
ATP13A1-211ENST00000492774 RIMBP3Q9UFD9 1639 aa21.11■□□□□ 0.97
ATP13A1-211ENST00000492774 TOP2AP11388 1531 aaKnown RBP21.1■□□□□ 0.97
ATP13A1-211ENST00000492774 RSF1Q96T23 1441 aaPredicted RBP21.06■□□□□ 0.96
ATP13A1-211ENST00000492774 ZNF608Q9ULD9 1512 aaPredicted RBP21.04■□□□□ 0.96
ATP13A1-211ENST00000492774 PRDM2Q13029 1718 aa21.02■□□□□ 0.96
ATP13A1-211ENST00000492774 ARHGEF11O15085 1522 aa20.99■□□□□ 0.95
ATP13A1-211ENST00000492774 IFT140Q96RY7 1462 aa20.95■□□□□ 0.94
ATP13A1-211ENST00000492774 EIF4G3O43432 1585 aaKnown RBP20.9■□□□□ 0.94
ATP13A1-211ENST00000492774 TOPBP1Q92547 1522 aa20.89■□□□□ 0.94
ATP13A1-211ENST00000492774 CCDC88BA6NC98 1476 aa20.86■□□□□ 0.93
ATP13A1-211ENST00000492774 CYB5RLQ6IPT4 315 aa20.84■□□□□ 0.93
ATP13A1-211ENST00000492774 CHD1O14646 1710 aa20.83■□□□□ 0.92
ATP13A1-211ENST00000492774 DNMBPQ6XZF7 1577 aa20.78■□□□□ 0.92
ATP13A1-211ENST00000492774 ARAP1Q96P48 1450 aa20.77■□□□□ 0.92
ATP13A1-211ENST00000492774 AQRO60306 1485 aaKnown RBP eCLIP20.76■□□□□ 0.913e-6■■□□□ 11.8
ATP13A1-211ENST00000492774 TRHP20396 242 aaPredicted RBP20.75■□□□□ 0.91
ATP13A1-211ENST00000492774 TARBP1Q13395 1621 aaKnown RBP20.74■□□□□ 0.91
ATP13A1-211ENST00000492774 ABCC8Q09428 1581 aa20.73■□□□□ 0.91
ATP13A1-211ENST00000492774 SUPT5HO00267 1087 aaKnown RBP20.72■□□□□ 0.91
ATP13A1-211ENST00000492774 FBLN2P98095 1184 aa20.72■□□□□ 0.91
ATP13A1-211ENST00000492774 POLA1P09884 1462 aaPredicted RBP20.66■□□□□ 0.9
ATP13A1-211ENST00000492774 RAD54L2Q9Y4B4 1467 aa20.62■□□□□ 0.89
ATP13A1-211ENST00000492774 TDRD9Q8NDG6 1382 aaKnown RBP20.58■□□□□ 0.88
ATP13A1-211ENST00000492774 SNAPC4Q5SXM2 1469 aa20.56■□□□□ 0.88
ATP13A1-211ENST00000492774 CLASP1Q7Z460 1538 aa20.54■□□□□ 0.88
ATP13A1-211ENST00000492774 SOGA1O94964 1423 aa20.53■□□□□ 0.88
ATP13A1-211ENST00000492774 FGD5Q6ZNL6 1462 aa20.49■□□□□ 0.87
ATP13A1-211ENST00000492774 SYNJ1O43426 1573 aa20.47■□□□□ 0.87
ATP13A1-211ENST00000492774 CHMP7Q8WUX9 453 aaPredicted RBP20.45■□□□□ 0.86
ATP13A1-211ENST00000492774 WDR97A6NE52 1622 aa20.43■□□□□ 0.86
ATP13A1-211ENST00000492774 MAGI1Q96QZ7 1491 aaPredicted RBP20.43■□□□□ 0.86
ATP13A1-211ENST00000492774 AEBP2Q6ZN18 517 aaPredicted RBP20.42■□□□□ 0.86
ATP13A1-211ENST00000492774 CUX1P39880 1505 aa20.41■□□□□ 0.86
ATP13A1-211ENST00000492774 GRIN2BQ13224 1484 aa20.4■□□□□ 0.86
ATP13A1-211ENST00000492774 SYNJ2O15056 1496 aa20.38■□□□□ 0.85
ATP13A1-211ENST00000492774 PBRM1Q86U86 1689 aa20.35■□□□□ 0.85
ATP13A1-211ENST00000492774 GAPVD1Q14C86 1478 aa20.34■□□□□ 0.85
ATP13A1-211ENST00000492774 ERCC6L2Q5T890 1561 aa20.25■□□□□ 0.83
ATP13A1-211ENST00000492774 ABCA5Q8WWZ7 1642 aa20.24■□□□□ 0.83
ATP13A1-211ENST00000492774 ABCA10Q8WWZ4 1543 aa20.19■□□□□ 0.82
ATP13A1-211ENST00000492774 GRIN2AQ12879 1464 aa20.16■□□□□ 0.82
ATP13A1-211ENST00000492774 CEP170Q5SW79 1584 aa20.14■□□□□ 0.81
ATP13A1-211ENST00000492774 ADAMTS12P58397 1594 aa20.12■□□□□ 0.81
ATP13A1-211ENST00000492774 NUP160Q12769 1436 aa20.08■□□□□ 0.8
ATP13A1-211ENST00000492774 SHROOM2Q13796 1616 aa20.05■□□□□ 0.8
ATP13A1-211ENST00000492774 KIF13AQ9H1H9 1805 aa20.04■□□□□ 0.8
ATP13A1-211ENST00000492774 WRNQ14191 1432 aaPredicted RBP eCLIP20.02■□□□□ 0.8
ATP13A1-211ENST00000492774 FHAD1B1AJZ9 1412 aa19.99■□□□□ 0.79
ATP13A1-211ENST00000492774 BIVM-ERCC5R4GMW8 1640 aa19.96■□□□□ 0.79
ATP13A1-211ENST00000492774 TOP2BQ02880 1626 aa19.94■□□□□ 0.78
ATP13A1-211ENST00000492774 PRG4Q92954 1404 aaPredicted RBP19.94■□□□□ 0.78
ATP13A1-211ENST00000492774 ERICH3Q5RHP9 1530 aa19.92■□□□□ 0.78
ATP13A1-211ENST00000492774 FAM69CQ0P6D2 419 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms