RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 CCDC18Q5T9S5 1454 aa28.06■■■□□ 2.08
SGMS1-204ENST00000492601 ZFYVE16Q7Z3T8 1539 aa28.06■■■□□ 2.08
SGMS1-204ENST00000492601 MADDQ8WXG6 1647 aa28.06■■■□□ 2.08
SGMS1-204ENST00000492601 EFCAB2Q5VUJ9 269 aa28.05■■■□□ 2.08
SGMS1-204ENST00000492601 CDC42BPBQ9Y5S2 1711 aa28.04■■■□□ 2.08
SGMS1-204ENST00000492601 ARHGAP5Q13017 1502 aa28.04■■■□□ 2.08
SGMS1-204ENST00000492601 POGZQ7Z3K3 1410 aa28.03■■■□□ 2.08
SGMS1-204ENST00000492601 YEATS2Q9ULM3 1422 aa28.03■■■□□ 2.08
SGMS1-204ENST00000492601 SIGLEC1Q9BZZ2 1709 aa28.03■■■□□ 2.08
SGMS1-204ENST00000492601 PTPRMP28827 1452 aa28.02■■■□□ 2.08
SGMS1-204ENST00000492601 FYCO1Q9BQS8 1478 aa28.02■■■□□ 2.08
SGMS1-204ENST00000492601 MAGI2Q86UL8 1455 aa27.99■■■□□ 2.07
SGMS1-204ENST00000492601 RIMS1Q86UR5 1692 aaKnown RBP27.99■■■□□ 2.07
SGMS1-204ENST00000492601 PREX2Q70Z35 1606 aa27.97■■■□□ 2.07
SGMS1-204ENST00000492601 CDC42BPAQ5VT25 1732 aa27.95■■■□□ 2.06
SGMS1-204ENST00000492601 ZNF518AQ6AHZ1 1483 aa27.9■■■□□ 2.06
SGMS1-204ENST00000492601 KDM5CP41229 1560 aa27.88■■■□□ 2.05
SGMS1-204ENST00000492601 AFAP1Q8N556 730 aa27.88■■■□□ 2.05
SGMS1-204ENST00000492601 FER1L4A9Z1Z3 1794 aa27.88■■■□□ 2.05
SGMS1-204ENST00000492601 ATP10AO60312 1499 aa27.88■■■□□ 2.05
SGMS1-204ENST00000492601 MLECQ14165 292 aa27.87■■■□□ 2.05
SGMS1-204ENST00000492601 ITSN2Q9NZM3 1697 aa27.87■■■□□ 2.05
SGMS1-204ENST00000492601 C9orf84Q5VXU9 1444 aa27.84■■■□□ 2.05
SGMS1-204ENST00000492601 ABCC1P33527 1531 aa27.84■■■□□ 2.05
SGMS1-204ENST00000492601 MYT1LQ9UL68 1186 aa27.84■■■□□ 2.05
SGMS1-204ENST00000492601 PLPPR3Q6T4P5 718 aa27.83■■■□□ 2.05
SGMS1-204ENST00000492601 ARHGEF12Q9NZN5 1544 aa27.82■■■□□ 2.04
SGMS1-204ENST00000492601 CEP162Q5TB80 1403 aa27.8■■■□□ 2.04
SGMS1-204ENST00000492601 DIP2CQ9Y2E4 1556 aa27.79■■■□□ 2.04
SGMS1-204ENST00000492601 TRAPPC8Q9Y2L5 1435 aa27.79■■■□□ 2.04
SGMS1-204ENST00000492601 ABCA6Q8N139 1617 aa27.78■■■□□ 2.04
SGMS1-204ENST00000492601 ZNF777Q9ULD5 760 aaPredicted RBP27.77■■■□□ 2.04
SGMS1-204ENST00000492601 SAMD9LQ8IVG5 1584 aa27.76■■■□□ 2.03
SGMS1-204ENST00000492601 GPATCH8Q9UKJ3 1502 aaKnown RBP27.75■■■□□ 2.03
SGMS1-204ENST00000492601 MLH3Q9UHC1 1453 aa27.74■■■□□ 2.03
SGMS1-204ENST00000492601 MTUS2Q5JR59 1369 aa27.73■■■□□ 2.03
SGMS1-204ENST00000492601 KIDINS220Q9ULH0 1771 aa27.73■■■□□ 2.03
SGMS1-204ENST00000492601 LMTK3Q96Q04 1460 aa27.72■■■□□ 2.03
SGMS1-204ENST00000492601 SYCP2Q9BX26 1530 aa27.71■■■□□ 2.03
SGMS1-204ENST00000492601 REREQ9P2R6 1566 aa27.69■■■□□ 2.02
SGMS1-204ENST00000492601 CCNB3Q8WWL7 1395 aa27.69■■■□□ 2.02
SGMS1-204ENST00000492601 LOC105371045A0A1W2PR82 267 aa27.65■■■□□ 2.02
SGMS1-204ENST00000492601 ILDR1Q86SU0 546 aaPredicted RBP27.65■■■□□ 2.02
SGMS1-204ENST00000492601 CFDP1Q9UEE9 299 aaPredicted RBP27.65■■■□□ 2.02
SGMS1-204ENST00000492601 EHBP1L1Q8N3D4 1523 aa27.65■■■□□ 2.02
SGMS1-204ENST00000492601 HNRNPMP52272 730 aaKnown RBP eCLIP27.64■■■□□ 2.025e-6■■□□□ 11.8
SGMS1-204ENST00000492601 TIAM1Q13009 1591 aa27.63■■■□□ 2.01
SGMS1-204ENST00000492601 CEBPAP49715 358 aaPredicted RBP27.61■■■□□ 2.01
SGMS1-204ENST00000492601 HSPA2P54652 639 aa27.61■■■□□ 2.01
SGMS1-204ENST00000492601 AGLP35573 1532 aa27.6■■■□□ 2.01
SGMS1-204ENST00000492601 PLEKHH2Q8IVE3 1493 aa27.59■■■□□ 2.01
SGMS1-204ENST00000492601 SPAG9O60271 1321 aaKnown RBP27.58■■■□□ 2.01
SGMS1-204ENST00000492601 PREX1Q8TCU6 1659 aa27.58■■■□□ 2.01
SGMS1-204ENST00000492601 SUPT6HQ7KZ85 1726 aaKnown RBP27.58■■■□□ 2.01
SGMS1-204ENST00000492601 KIAA1107Q9UPP5 1409 aa27.58■■■□□ 2
SGMS1-204ENST00000492601 SETD1BQ9UPS6 1966 aaKnown RBP27.56■■■□□ 2
SGMS1-204ENST00000492601 ATP7AQ04656 1500 aa27.56■■■□□ 2
SGMS1-204ENST00000492601 C3P01024 1663 aa27.56■■■□□ 2
SGMS1-204ENST00000492601 INO80Q9ULG1 1556 aaPredicted RBP27.55■■■□□ 2
SGMS1-204ENST00000492601 ZNF644Q9H582 1327 aaPredicted RBP27.53■■■□□ 2
SGMS1-204ENST00000492601 ESF1Q9H501 851 aaKnown RBP27.5■■□□□ 1.99
SGMS1-204ENST00000492601 NCOA2Q15596 1464 aa27.49■■□□□ 1.99
SGMS1-204ENST00000492601 VPS8Q8N3P4 1428 aa27.48■■□□□ 1.99
SGMS1-204ENST00000492601 ADGBQ8N7X0 1667 aa27.46■■□□□ 1.99
SGMS1-204ENST00000492601 MBD5Q9P267 1494 aa27.44■■□□□ 1.98
SGMS1-204ENST00000492601 PLXNC1O60486 1568 aa27.44■■□□□ 1.98
SGMS1-204ENST00000492601 A2MP01023 1474 aa27.44■■□□□ 1.98
SGMS1-204ENST00000492601 MROH2AA6NES4 1674 aa27.41■■□□□ 1.98
SGMS1-204ENST00000492601 UHRF1BP1Q6BDS2 1440 aa27.41■■□□□ 1.98
SGMS1-204ENST00000492601 CNTLNQ9NXG0 1405 aa27.41■■□□□ 1.98
SGMS1-204ENST00000492601 CLTCQ00610 1675 aaKnown RBP27.4■■□□□ 1.98
SGMS1-204ENST00000492601 CAMSAP2Q08AD1 1489 aa27.39■■□□□ 1.98
SGMS1-204ENST00000492601 LRRC9Q6ZRR7 1453 aa27.38■■□□□ 1.97
SGMS1-204ENST00000492601 STRCQ7RTU9 1775 aa27.37■■□□□ 1.97
SGMS1-204ENST00000492601 CCDC141Q6ZP82 1450 aa27.34■■□□□ 1.97
SGMS1-204ENST00000492601 RTEL1-TNFRSF6BF6WH68 1400 aa27.33■■□□□ 1.97
SGMS1-204ENST00000492601 GGT6Q6P531 493 aa27.33■■□□□ 1.97
SGMS1-204ENST00000492601 KANK4Q5T7N3 995 aaPredicted RBP27.31■■□□□ 1.96
SGMS1-204ENST00000492601 ZMYM3Q14202 1370 aa27.31■■□□□ 1.96
SGMS1-204ENST00000492601 FBXO41Q8TF61 875 aa27.3■■□□□ 1.96
SGMS1-204ENST00000492601 MAP3K1Q13233 1512 aa27.3■■□□□ 1.96
SGMS1-204ENST00000492601 ARHGEF5Q12774 1597 aa27.28■■□□□ 1.96
SGMS1-204ENST00000492601 DHX29Q7Z478 1369 aaKnown RBP27.26■■□□□ 1.95
SGMS1-204ENST00000492601 RSPH4AQ5TD94 716 aa27.25■■□□□ 1.95
SGMS1-204ENST00000492601 NPATQ14207 1427 aa27.24■■□□□ 1.95
SGMS1-204ENST00000492601 DMRT2Q9Y5R5 561 aa27.2■■□□□ 1.94
SGMS1-204ENST00000492601 MYO3AQ8NEV4 1616 aa27.19■■□□□ 1.94
SGMS1-204ENST00000492601 MYOM3Q5VTT5 1437 aa27.19■■□□□ 1.94
SGMS1-204ENST00000492601 KIF3BO15066 747 aa27.19■■□□□ 1.94
SGMS1-204ENST00000492601 TSPY4P0CV99 314 aa27.19■■□□□ 1.94
SGMS1-204ENST00000492601 TSPY10P0CW01 314 aa27.19■■□□□ 1.94
SGMS1-204ENST00000492601 PPP6R1Q9UPN7 881 aa27.19■■□□□ 1.94
SGMS1-204ENST00000492601 PTPRKQ15262 1439 aa27.18■■□□□ 1.94
SGMS1-204ENST00000492601 ZNF142P52746 1687 aaPredicted RBP27.17■■□□□ 1.94
SGMS1-204ENST00000492601 CAMSAP1Q5T5Y3 1602 aa27.16■■□□□ 1.94
SGMS1-204ENST00000492601 APLP2Q06481 763 aa27.16■■□□□ 1.94
SGMS1-204ENST00000492601 CERKQ8TCT0 537 aa27.16■■□□□ 1.94
SGMS1-204ENST00000492601 MAST1Q9Y2H9 1570 aa27.14■■□□□ 1.94
SGMS1-204ENST00000492601 NCOA1Q15788 1441 aa27.14■■□□□ 1.93
SGMS1-204ENST00000492601 MIA2Q96PC5 1412 aa27.14■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms