RNA–Protein interactions for RNA: ENST00000492390.5

CDK11A-220, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-220ENST00000492390 HECW1Q76N89 1606 aa26.53■■□□□ 1.84
CDK11A-220ENST00000492390 ARHGEF12Q9NZN5 1544 aa26.51■■□□□ 1.83
CDK11A-220ENST00000492390 PREX1Q8TCU6 1659 aa26.5■■□□□ 1.83
CDK11A-220ENST00000492390 CSRNP3Q8WYN3 585 aa26.5■■□□□ 1.83
CDK11A-220ENST00000492390 SCAPERQ9BY12 1400 aa26.48■■□□□ 1.83
CDK11A-220ENST00000492390 ATP10AO60312 1499 aa26.48■■□□□ 1.83
CDK11A-220ENST00000492390 CEBPAP49715 358 aaPredicted RBP26.45■■□□□ 1.82
CDK11A-220ENST00000492390 C9orf84Q5VXU9 1444 aa26.45■■□□□ 1.82
CDK11A-220ENST00000492390 PLCH2O75038 1416 aa26.44■■□□□ 1.82
CDK11A-220ENST00000492390 RANGAP1P46060 587 aaPredicted RBP26.43■■□□□ 1.82
CDK11A-220ENST00000492390 STRCQ7RTU9 1775 aa26.43■■□□□ 1.82
CDK11A-220ENST00000492390 UHRF1BP1Q6BDS2 1440 aa26.41■■□□□ 1.82
CDK11A-220ENST00000492390 SPATA31D1Q6ZQQ2 1576 aa26.4■■□□□ 1.82
CDK11A-220ENST00000492390 SETD1BQ9UPS6 1966 aaKnown RBP26.38■■□□□ 1.81
CDK11A-220ENST00000492390 PTPRTO14522 1441 aa26.37■■□□□ 1.81
CDK11A-220ENST00000492390 EFCAB2Q5VUJ9 269 aa26.36■■□□□ 1.81
CDK11A-220ENST00000492390 CDK13Q14004 1512 aaKnown RBP26.31■■□□□ 1.8
CDK11A-220ENST00000492390 IQSEC2Q5JU85 1478 aa26.29■■□□□ 1.8
CDK11A-220ENST00000492390 ZNF518AQ6AHZ1 1483 aa26.29■■□□□ 1.8
CDK11A-220ENST00000492390 LTBP4Q8N2S1 1624 aa26.25■■□□□ 1.79
CDK11A-220ENST00000492390 EEA1Q15075 1411 aa26.25■■□□□ 1.79
CDK11A-220ENST00000492390 MYO5CQ9NQX4 1742 aa26.24■■□□□ 1.79
CDK11A-220ENST00000492390 AFAP1Q8N556 730 aa26.23■■□□□ 1.79
CDK11A-220ENST00000492390 KDM5CP41229 1560 aa26.23■■□□□ 1.79
CDK11A-220ENST00000492390 REREQ9P2R6 1566 aa26.21■■□□□ 1.79
CDK11A-220ENST00000492390 MYT1LQ9UL68 1186 aa26.21■■□□□ 1.79
CDK11A-220ENST00000492390 CDK11AQ9UQ88 783 aaPredicted RBP26.21■■□□□ 1.79
CDK11A-220ENST00000492390 TRAPPC8Q9Y2L5 1435 aa26.21■■□□□ 1.79
CDK11A-220ENST00000492390 ESF1Q9H501 851 aaKnown RBP26.2■■□□□ 1.78
CDK11A-220ENST00000492390 C3P01024 1663 aa26.19■■□□□ 1.78
CDK11A-220ENST00000492390 DIP2CQ9Y2E4 1556 aa26.18■■□□□ 1.78
CDK11A-220ENST00000492390 NCOA1Q15788 1441 aa26.16■■□□□ 1.78
CDK11A-220ENST00000492390 ARHGAP5Q13017 1502 aa26.15■■□□□ 1.78
CDK11A-220ENST00000492390 MLH3Q9UHC1 1453 aa26.15■■□□□ 1.78
CDK11A-220ENST00000492390 AGLP35573 1532 aa26.14■■□□□ 1.78
CDK11A-220ENST00000492390 ATP1B4Q9UN42 357 aaPredicted RBP26.14■■□□□ 1.78
CDK11A-220ENST00000492390 FMN1Q68DA7 1419 aa26.12■■□□□ 1.77
CDK11A-220ENST00000492390 KIF14Q15058 1648 aa26.11■■□□□ 1.77
CDK11A-220ENST00000492390 CNTLNQ9NXG0 1405 aa26.11■■□□□ 1.77
CDK11A-220ENST00000492390 TROQ12816 1431 aaPredicted RBP26.1■■□□□ 1.77
CDK11A-220ENST00000492390 ABCA6Q8N139 1617 aa26.09■■□□□ 1.77
CDK11A-220ENST00000492390 CLIP1P30622 1438 aa26.07■■□□□ 1.76
CDK11A-220ENST00000492390 UBAP1LF5GYI3 381 aa26.04■■□□□ 1.76
CDK11A-220ENST00000492390 NPATQ14207 1427 aa26.04■■□□□ 1.76
CDK11A-220ENST00000492390 CAMSAP1Q5T5Y3 1602 aa26.03■■□□□ 1.76
CDK11A-220ENST00000492390 ZNF335Q9H4Z2 1342 aaPredicted RBP26■■□□□ 1.75
CDK11A-220ENST00000492390 CDC42BPBQ9Y5S2 1711 aa25.99■■□□□ 1.75
CDK11A-220ENST00000492390 NCKAP5LQ9HCH0 1330 aa25.98■■□□□ 1.75
CDK11A-220ENST00000492390 ABCC1P33527 1531 aa25.98■■□□□ 1.75
CDK11A-220ENST00000492390 ZMYM3Q14202 1370 aa25.96■■□□□ 1.75
CDK11A-220ENST00000492390 PKD2Q13563 968 aa25.96■■□□□ 1.75
CDK11A-220ENST00000492390 ARHGAP35Q9NRY4 1499 aa25.95■■□□□ 1.74
CDK11A-220ENST00000492390 MROH2AA6NES4 1674 aa25.95■■□□□ 1.74
CDK11A-220ENST00000492390 KIDINS220Q9ULH0 1771 aa25.95■■□□□ 1.74
CDK11A-220ENST00000492390 ITSN2Q9NZM3 1697 aa25.93■■□□□ 1.74
CDK11A-220ENST00000492390 PREX2Q70Z35 1606 aa25.92■■□□□ 1.74
CDK11A-220ENST00000492390 PLA2R1Q13018 1463 aa25.92■■□□□ 1.74
CDK11A-220ENST00000492390 UBTFP17480 764 aaKnown RBP25.92■■□□□ 1.74
CDK11A-220ENST00000492390 TCOF1Q13428 1488 aaKnown RBP25.87■■□□□ 1.73
CDK11A-220ENST00000492390 ZNF142P52746 1687 aaPredicted RBP25.85■■□□□ 1.73
CDK11A-220ENST00000492390 LRRIQ1Q96JM4 1722 aa25.85■■□□□ 1.73
CDK11A-220ENST00000492390 PPP6R1Q9UPN7 881 aa25.84■■□□□ 1.73
CDK11A-220ENST00000492390 SAMD9LQ8IVG5 1584 aa25.83■■□□□ 1.73
CDK11A-220ENST00000492390 MYO3AQ8NEV4 1616 aa25.82■■□□□ 1.72
CDK11A-220ENST00000492390 SPAG9O60271 1321 aaKnown RBP25.82■■□□□ 1.72
CDK11A-220ENST00000492390 CEP170BQ9Y4F5 1589 aaPredicted RBP25.82■■□□□ 1.72
CDK11A-220ENST00000492390 PTPRKQ15262 1439 aa25.81■■□□□ 1.72
CDK11A-220ENST00000492390 HSPA1LP34931 641 aa25.8■■□□□ 1.72
CDK11A-220ENST00000492390 CCDC18Q5T9S5 1454 aa25.79■■□□□ 1.72
CDK11A-220ENST00000492390 MED1Q15648 1581 aaPredicted RBP25.79■■□□□ 1.72
CDK11A-220ENST00000492390 EHMT2Q96KQ7 1210 aa25.79■■□□□ 1.72
CDK11A-220ENST00000492390 CLTCQ00610 1675 aaKnown RBP25.77■■□□□ 1.72
CDK11A-220ENST00000492390 CDC42BPAQ5VT25 1732 aa25.77■■□□□ 1.72
CDK11A-220ENST00000492390 SUPT6HQ7KZ85 1726 aaKnown RBP25.77■■□□□ 1.72
CDK11A-220ENST00000492390 TOM1O60784 492 aa25.77■■□□□ 1.72
CDK11A-220ENST00000492390 ZNF777Q9ULD5 760 aaPredicted RBP25.77■■□□□ 1.72
CDK11A-220ENST00000492390 SCAF1Q9H7N4 1312 aaKnown RBP25.76■■□□□ 1.71
CDK11A-220ENST00000492390 CASKIN1Q8WXD9 1431 aa25.74■■□□□ 1.71
CDK11A-220ENST00000492390 PIP4K2BP78356 416 aa25.74■■□□□ 1.71
CDK11A-220ENST00000492390 HNRNPMP52272 730 aaKnown RBP eCLIP25.73■■□□□ 1.71
CDK11A-220ENST00000492390 GGT6Q6P531 493 aa25.73■■□□□ 1.71
CDK11A-220ENST00000492390 PLXNC1O60486 1568 aa25.73■■□□□ 1.71
CDK11A-220ENST00000492390 SYCP2Q9BX26 1530 aa25.73■■□□□ 1.71
CDK11A-220ENST00000492390 A2MP01023 1474 aa25.72■■□□□ 1.71
CDK11A-220ENST00000492390 ATP7AQ04656 1500 aa25.72■■□□□ 1.71
CDK11A-220ENST00000492390 CPS1P31327 1500 aa25.71■■□□□ 1.71
CDK11A-220ENST00000492390 A2ML1A8K2U0 1454 aa25.7■■□□□ 1.7
CDK11A-220ENST00000492390 KIAA1107Q9UPP5 1409 aa25.7■■□□□ 1.7
CDK11A-220ENST00000492390 GPATCH8Q9UKJ3 1502 aaKnown RBP25.68■■□□□ 1.7
CDK11A-220ENST00000492390 PLEKHH2Q8IVE3 1493 aa25.66■■□□□ 1.7
CDK11A-220ENST00000492390 INO80Q9ULG1 1556 aaPredicted RBP25.66■■□□□ 1.7
CDK11A-220ENST00000492390 PHF23Q9BUL5 403 aaPredicted RBP25.66■■□□□ 1.7
CDK11A-220ENST00000492390 DNMT1P26358 1616 aaKnown RBP25.66■■□□□ 1.7
CDK11A-220ENST00000492390 SHANK2Q9UPX8 1470 aa25.66■■□□□ 1.7
CDK11A-220ENST00000492390 CFDP1Q9UEE9 299 aaPredicted RBP25.61■■□□□ 1.69
CDK11A-220ENST00000492390 NEURL4Q96JN8 1562 aa25.59■■□□□ 1.69
CDK11A-220ENST00000492390 POLR1AO95602 1720 aaPredicted RBP25.58■■□□□ 1.69
CDK11A-220ENST00000492390 FYCO1Q9BQS8 1478 aa25.58■■□□□ 1.69
CDK11A-220ENST00000492390 ADGBQ8N7X0 1667 aa25.57■■□□□ 1.68
CDK11A-220ENST00000492390 ANKLE2Q86XL3 938 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms