RNA–Protein interactions for RNA: ENST00000490611.1

MTA3-217, Transcript of metastasis associated 1 family member 3, humanhuman

TSL 2

Gene MTA3, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA3-217ENST00000490611 ARSIQ5FYB1 569 aa12.45□□□□□ -0.42
MTA3-217ENST00000490611 ZNF316A6NFI3 1004 aaPredicted RBP12.44□□□□□ -0.42
MTA3-217ENST00000490611 IFNLR1Q8IU57 520 aaPredicted RBP12.42□□□□□ -0.42
MTA3-217ENST00000490611 PBX2P40425 430 aa12.38□□□□□ -0.43
MTA3-217ENST00000490611 PLA2G2EQ9NZK7 142 aa12.38□□□□□ -0.43
MTA3-217ENST00000490611 MS4A4AQ96JQ5 239 aa12.36□□□□□ -0.43
MTA3-217ENST00000490611 HCSTQ9UBK5 93 aa12.34□□□□□ -0.43
MTA3-217ENST00000490611 KHSRPQ92945 711 aaKnown RBP eCLIP12.33□□□□□ -0.44
MTA3-217ENST00000490611 PHF8Q9UPP1 1060 aa12.32□□□□□ -0.44
MTA3-217ENST00000490611 RIOK3O14730 519 aaKnown RBP12.28□□□□□ -0.44
MTA3-217ENST00000490611 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.25□□□□□ -0.45
MTA3-217ENST00000490611 VGFO15240 615 aaPredicted RBP12.25□□□□□ -0.45
MTA3-217ENST00000490611 ZFP91Q96JP5 570 aaPredicted RBP12.25□□□□□ -0.45
MTA3-217ENST00000490611 NUDT7P0C024 238 aa12.24□□□□□ -0.45
MTA3-217ENST00000490611 NLRP6P59044 892 aa12.23□□□□□ -0.45
MTA3-217ENST00000490611 AXIN2Q9Y2T1 843 aa12.21□□□□□ -0.45
MTA3-217ENST00000490611 POTEEQ6S8J3 1075 aa12.2□□□□□ -0.46
MTA3-217ENST00000490611 LHX6Q9UPM6 363 aa12.2□□□□□ -0.46
MTA3-217ENST00000490611 ADGRD1Q6QNK2 874 aa12.18□□□□□ -0.46
MTA3-217ENST00000490611 KIF3CO14782 793 aa12.17□□□□□ -0.46
MTA3-217ENST00000490611 SLC34A2O95436 690 aa12.17□□□□□ -0.46
MTA3-217ENST00000490611 RNF25Q96BH1 459 aaPredicted RBP12.17□□□□□ -0.46
MTA3-217ENST00000490611 PCDHGA4Q9Y5G9 962 aa12.16□□□□□ -0.46
MTA3-217ENST00000490611 PSDA5PKW4 1024 aaPredicted RBP12.15□□□□□ -0.46
MTA3-217ENST00000490611 C2orf72A6NCS6 295 aa12.15□□□□□ -0.46
MTA3-217ENST00000490611 ARHGAP33O14559 1287 aa12.14□□□□□ -0.47
MTA3-217ENST00000490611 FBXO22Q8NEZ5 403 aa12.14□□□□□ -0.47
MTA3-217ENST00000490611 TK2O00142 265 aa12.11□□□□□ -0.47
MTA3-217ENST00000490611 TAOK2Q9UL54 1235 aa12.1□□□□□ -0.47
MTA3-217ENST00000490611 HRO43593 1189 aa12.05□□□□□ -0.48
MTA3-217ENST00000490611 TMC2Q8TDI7 906 aa12.05□□□□□ -0.48
MTA3-217ENST00000490611 BCL11BQ9C0K0 894 aaPredicted RBP12.05□□□□□ -0.48
MTA3-217ENST00000490611 RGS20O76081 388 aa12.04□□□□□ -0.48
MTA3-217ENST00000490611 STAC3Q96MF2 364 aa12.03□□□□□ -0.48
MTA3-217ENST00000490611 MFRPQ9BY79 579 aa12.03□□□□□ -0.48
MTA3-217ENST00000490611 KCTD12Q96CX2 325 aaKnown RBP12.01□□□□□ -0.49
MTA3-217ENST00000490611 STK24Q9Y6E0 443 aa12.01□□□□□ -0.49
MTA3-217ENST00000490611 DMRTA1Q5VZB9 504 aa11.98□□□□□ -0.49
MTA3-217ENST00000490611 PSEN2P49810 448 aa11.96□□□□□ -0.49
MTA3-217ENST00000490611 PPP4R3BQ5MIZ7 849 aa11.95□□□□□ -0.5
MTA3-217ENST00000490611 IRX2Q9BZI1 471 aaPredicted RBP11.95□□□□□ -0.5
MTA3-217ENST00000490611 KDM4FA0A1W2PPD8 638 aa11.94□□□□□ -0.5
MTA3-217ENST00000490611 IFFO2Q5TF58 517 aa11.94□□□□□ -0.5
MTA3-217ENST00000490611 KCNH8Q96L42 1107 aa11.94□□□□□ -0.5
MTA3-217ENST00000490611 PTCD2Q8WV60 388 aaKnown RBP11.93□□□□□ -0.5
MTA3-217ENST00000490611 STK25O00506 426 aa11.91□□□□□ -0.5
MTA3-217ENST00000490611 PTPN5P54829 565 aa11.87□□□□□ -0.51
MTA3-217ENST00000490611 KCNK17Q96T54 332 aa11.85□□□□□ -0.51
MTA3-217ENST00000490611 A0A0G2JS52 829 aa11.84□□□□□ -0.51
MTA3-217ENST00000490611 TBC1D12O60347 775 aa11.84□□□□□ -0.51
MTA3-217ENST00000490611 VPS9D1Q9Y2B5 631 aa11.82□□□□□ -0.52
MTA3-217ENST00000490611 FOXK1P85037 733 aa11.8□□□□□ -0.52
MTA3-217ENST00000490611 THSD4Q6ZMP0 1018 aa11.78□□□□□ -0.52
MTA3-217ENST00000490611 PLPP6Q8IY26 295 aa11.78□□□□□ -0.52
MTA3-217ENST00000490611 SLC4A5Q9BY07 1137 aa11.78□□□□□ -0.52
MTA3-217ENST00000490611 GOLGA8CPA6NN73 597 aa11.74□□□□□ -0.53
MTA3-217ENST00000490611 PPP1R37O75864 691 aa11.73□□□□□ -0.53
MTA3-217ENST00000490611 GPHNQ9NQX3 736 aaPredicted RBP11.72□□□□□ -0.53
MTA3-217ENST00000490611 WNT2BQ93097 391 aa11.71□□□□□ -0.53
MTA3-217ENST00000490611 BCL2L12Q9HB09 334 aa11.71□□□□□ -0.53
MTA3-217ENST00000490611 BHMG1C9JSJ3 638 aaPredicted RBP11.7□□□□□ -0.54
MTA3-217ENST00000490611 MRPL50Q8N5N7 158 aaKnown RBP11.69□□□□□ -0.54
MTA3-217ENST00000490611 ECM2O94769 699 aaPredicted RBP11.68□□□□□ -0.54
MTA3-217ENST00000490611 ZNF454Q8N9F8 522 aa11.68□□□□□ -0.54
MTA3-217ENST00000490611 DSG2Q14126 1118 aa11.67□□□□□ -0.54
MTA3-217ENST00000490611 PTPREP23469 700 aa11.66□□□□□ -0.54
MTA3-217ENST00000490611 Q6ZNB5 142 aa11.66□□□□□ -0.54
MTA3-217ENST00000490611 NBPF3Q9H094 633 aa11.65□□□□□ -0.54
MTA3-217ENST00000490611 ZBED2Q9BTP6 218 aa11.63□□□□□ -0.55
MTA3-217ENST00000490611 OXER1Q8TDS5 423 aa11.62□□□□□ -0.55
MTA3-217ENST00000490611 ITGBL1O95965 494 aaPredicted RBP11.6□□□□□ -0.55
MTA3-217ENST00000490611 FOSBP53539 338 aa11.59□□□□□ -0.55
MTA3-217ENST00000490611 RGL2O15211 777 aa11.57□□□□□ -0.56
MTA3-217ENST00000490611 UPF1Q92900 1129 aaKnown RBP eCLIP11.57□□□□□ -0.56
MTA3-217ENST00000490611 JPH4Q96JJ6 628 aa11.54□□□□□ -0.56
MTA3-217ENST00000490611 LAPTM4AQ15012 233 aa11.53□□□□□ -0.56
MTA3-217ENST00000490611 ANKK1Q8NFD2 765 aa11.53□□□□□ -0.56
MTA3-217ENST00000490611 NYAP1Q6ZVC0 841 aa11.51□□□□□ -0.57
MTA3-217ENST00000490611 ZDHHC16Q969W1 377 aa11.5□□□□□ -0.57
MTA3-217ENST00000490611 ANO8Q9HCE9 1232 aaPredicted RBP11.48□□□□□ -0.57
MTA3-217ENST00000490611 ADAM33Q9BZ11 813 aa11.47□□□□□ -0.57
MTA3-217ENST00000490611 RABGEF1Q9UJ41 708 aa11.47□□□□□ -0.57
MTA3-217ENST00000490611 PPP1R3GB7ZBB8 358 aa11.45□□□□□ -0.58
MTA3-217ENST00000490611 KCNC4Q03721 635 aa11.45□□□□□ -0.58
MTA3-217ENST00000490611 PKD2Q13563 968 aa11.45□□□□□ -0.58
MTA3-217ENST00000490611 PPP1R15BQ5SWA1 713 aa11.45□□□□□ -0.58
MTA3-217ENST00000490611 LAPTM4BQ86VI4 370 aa11.43□□□□□ -0.58
MTA3-217ENST00000490611 SOWAHBA6NEL2 793 aa11.42□□□□□ -0.58
MTA3-217ENST00000490611 EVI5O60447 810 aa11.42□□□□□ -0.58
MTA3-217ENST00000490611 BCAMP50895 628 aa11.42□□□□□ -0.58
MTA3-217ENST00000490611 CRISPLD2Q9H0B8 497 aa11.42□□□□□ -0.58
MTA3-217ENST00000490611 TRAF7Q6Q0C0 670 aa11.41□□□□□ -0.58
MTA3-217ENST00000490611 HS6ST3Q8IZP7 471 aa11.4□□□□□ -0.58
MTA3-217ENST00000490611 GFRA3O60609 400 aa11.37□□□□□ -0.59
MTA3-217ENST00000490611 PROX2Q3B8N5 592 aa11.36□□□□□ -0.59
MTA3-217ENST00000490611 LCE2BO14633 110 aa11.35□□□□□ -0.59
MTA3-217ENST00000490611 ZFRQ96KR1 1074 aaKnown RBP11.35□□□□□ -0.59
MTA3-217ENST00000490611 RYDENQ9NUL5 291 aaKnown RBP11.35□□□□□ -0.59
MTA3-217ENST00000490611 WBP1LQ9NX94 342 aa11.35□□□□□ -0.59
MTA3-217ENST00000490611 PDE4AP27815 886 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms