RNA–Protein interactions for RNA: ENST00000490416.2

NF1-214, Transcript of neurofibromin 1, humanhuman

TSL 3 BASIC

Gene NF1, Length 1,329 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-214ENST00000490416 ZNF710Q8N1W2 664 aa12.89□□□□□ -0.35
NF1-214ENST00000490416 TMC2Q8TDI7 906 aa12.89□□□□□ -0.35
NF1-214ENST00000490416 GTPBP6O43824 516 aaPredicted RBP12.88□□□□□ -0.35
NF1-214ENST00000490416 HOXB3P14651 431 aaPredicted RBP12.88□□□□□ -0.35
NF1-214ENST00000490416 RIMBP2O15034 1052 aa12.88□□□□□ -0.35
NF1-214ENST00000490416 C2orf72A6NCS6 295 aa12.87□□□□□ -0.35
NF1-214ENST00000490416 BBXQ8WY36 941 aaPredicted RBP12.86□□□□□ -0.35
NF1-214ENST00000490416 KIF3CO14782 793 aa12.85□□□□□ -0.35
NF1-214ENST00000490416 MARVELD3Q96A59 401 aa12.82□□□□□ -0.36
NF1-214ENST00000490416 EMP3P54852 163 aa12.8□□□□□ -0.36
NF1-214ENST00000490416 ZSWIM6Q9HCJ5 1215 aa12.79□□□□□ -0.36
NF1-214ENST00000490416 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.79□□□□□ -0.36
NF1-214ENST00000490416 PCDH10Q9P2E7 1040 aa12.78□□□□□ -0.36
NF1-214ENST00000490416 HOXB1P14653 301 aaPredicted RBP12.77□□□□□ -0.37
NF1-214ENST00000490416 GPHNQ9NQX3 736 aaPredicted RBP12.76□□□□□ -0.37
NF1-214ENST00000490416 SPRYD3Q8NCJ5 442 aa12.72□□□□□ -0.37
NF1-214ENST00000490416 FOXK1P85037 733 aa12.71□□□□□ -0.37
NF1-214ENST00000490416 FAM205CA6NFA0 338 aa12.7□□□□□ -0.38
NF1-214ENST00000490416 PDE4AP27815 886 aa12.7□□□□□ -0.38
NF1-214ENST00000490416 GPR153Q6NV75 609 aa12.7□□□□□ -0.38
NF1-214ENST00000490416 CDAN1Q8IWY9 1227 aa12.7□□□□□ -0.38
NF1-214ENST00000490416 PLPP6Q8IY26 295 aa12.7□□□□□ -0.38
NF1-214ENST00000490416 ARSIQ5FYB1 569 aa12.69□□□□□ -0.38
NF1-214ENST00000490416 CRISPLD2Q9H0B8 497 aa12.69□□□□□ -0.38
NF1-214ENST00000490416 SLC34A2O95436 690 aa12.68□□□□□ -0.38
NF1-214ENST00000490416 DSG2Q14126 1118 aa12.68□□□□□ -0.38
NF1-214ENST00000490416 ERBB3P21860 1342 aa12.68□□□□□ -0.38
NF1-214ENST00000490416 HS3ST6Q96QI5 342 aa12.66□□□□□ -0.38
NF1-214ENST00000490416 PAXIP1Q6ZW49 1069 aaPredicted RBP12.64□□□□□ -0.39
NF1-214ENST00000490416 CFAP44Q96MT7 982 aa12.64□□□□□ -0.39
NF1-214ENST00000490416 NCKAP5LQ9HCH0 1330 aa12.64□□□□□ -0.39
NF1-214ENST00000490416 PCDHGA4Q9Y5G9 962 aa12.63□□□□□ -0.39
NF1-214ENST00000490416 PPP1R15BQ5SWA1 713 aa12.62□□□□□ -0.39
NF1-214ENST00000490416 KHSRPQ92945 711 aaKnown RBP eCLIP12.62□□□□□ -0.397e-9■■■■□ 24.2
NF1-214ENST00000490416 LARP6Q9BRS8 491 aaKnown RBP12.62□□□□□ -0.39
NF1-214ENST00000490416 POTEB3A0JP26 581 aa12.6□□□□□ -0.39
NF1-214ENST00000490416 TBC1D12O60347 775 aa12.6□□□□□ -0.39
NF1-214ENST00000490416 POTEBQ6S5H4 581 aa12.6□□□□□ -0.39
NF1-214ENST00000490416 DDX27Q96GQ7 796 aaKnown RBP12.6□□□□□ -0.39
NF1-214ENST00000490416 NUDT7P0C024 238 aa12.59□□□□□ -0.39
NF1-214ENST00000490416 VARS2Q5ST30 1063 aaKnown RBP12.59□□□□□ -0.39
NF1-214ENST00000490416 CADPS2Q86UW7 1296 aa12.59□□□□□ -0.39
NF1-214ENST00000490416 PTCD2Q8WV60 388 aaKnown RBP12.59□□□□□ -0.39
NF1-214ENST00000490416 ZNF316A6NFI3 1004 aaPredicted RBP12.57□□□□□ -0.4
NF1-214ENST00000490416 MFSD10Q14728 455 aa12.55□□□□□ -0.4
NF1-214ENST00000490416 PLSCR2Q9NRY7 297 aa12.55□□□□□ -0.4
NF1-214ENST00000490416 UPF1Q92900 1129 aaKnown RBP eCLIP12.53□□□□□ -0.4
NF1-214ENST00000490416 OXER1Q8TDS5 423 aa12.51□□□□□ -0.41
NF1-214ENST00000490416 ZNF687Q8N1G0 1237 aa12.5□□□□□ -0.41
NF1-214ENST00000490416 LHX6Q9UPM6 363 aa12.5□□□□□ -0.41
NF1-214ENST00000490416 PSDA5PKW4 1024 aaPredicted RBP12.46□□□□□ -0.41
NF1-214ENST00000490416 KRTAP3-3Q9BYR6 98 aa12.45□□□□□ -0.42
NF1-214ENST00000490416 KRTAP3-2Q9BYR7 98 aa12.45□□□□□ -0.42
NF1-214ENST00000490416 KDM4FA0A1W2PPD8 638 aa12.44□□□□□ -0.42
NF1-214ENST00000490416 MAP3K9P80192 1104 aa12.43□□□□□ -0.42
NF1-214ENST00000490416 WDR70Q9NW82 654 aa12.4□□□□□ -0.42
NF1-214ENST00000490416 EMILIN3Q9NT22 766 aa12.39□□□□□ -0.43
NF1-214ENST00000490416 EVI5O60447 810 aa12.38□□□□□ -0.43
NF1-214ENST00000490416 PBX2P40425 430 aa12.37□□□□□ -0.43
NF1-214ENST00000490416 CAMK2BQ13554 666 aa12.37□□□□□ -0.43
NF1-214ENST00000490416 PPP4R3BQ5MIZ7 849 aa12.37□□□□□ -0.43
NF1-214ENST00000490416 SPNS2Q8IVW8 549 aa12.37□□□□□ -0.43
NF1-214ENST00000490416 ANO8Q9HCE9 1232 aaPredicted RBP12.34□□□□□ -0.43
NF1-214ENST00000490416 TSHZ2Q9NRE2 1034 aa12.34□□□□□ -0.43
NF1-214ENST00000490416 ZNF454Q8N9F8 522 aa12.33□□□□□ -0.44
NF1-214ENST00000490416 DPYSL4O14531 572 aa12.31□□□□□ -0.44
NF1-214ENST00000490416 E2F4Q16254 413 aa12.31□□□□□ -0.44
NF1-214ENST00000490416 ARHGAP33O14559 1287 aa12.3□□□□□ -0.44
NF1-214ENST00000490416 LSM11P83369 360 aaKnown RBP eCLIP12.3□□□□□ -0.44
NF1-214ENST00000490416 ANKRD13DQ6ZTN6 518 aa12.3□□□□□ -0.44
NF1-214ENST00000490416 AXIN2Q9Y2T1 843 aa12.3□□□□□ -0.44
NF1-214ENST00000490416 PLCB2Q00722 1185 aa12.29□□□□□ -0.44
NF1-214ENST00000490416 KCNH8Q96L42 1107 aa12.29□□□□□ -0.44
NF1-214ENST00000490416 FOSBP53539 338 aa12.28□□□□□ -0.44
NF1-214ENST00000490416 MMRN1Q13201 1228 aa12.28□□□□□ -0.44
NF1-214ENST00000490416 POTEEQ6S8J3 1075 aa12.28□□□□□ -0.44
NF1-214ENST00000490416 JPH4Q96JJ6 628 aa12.28□□□□□ -0.44
NF1-214ENST00000490416 ZDHHC16Q969W1 377 aa12.23□□□□□ -0.45
NF1-214ENST00000490416 KCNK17Q96T54 332 aa12.23□□□□□ -0.45
NF1-214ENST00000490416 PTGER2P43116 358 aa12.22□□□□□ -0.45
NF1-214ENST00000490416 PSEN2P49810 448 aa12.22□□□□□ -0.45
NF1-214ENST00000490416 BCL2L12Q9HB09 334 aa12.22□□□□□ -0.45
NF1-214ENST00000490416 SPDYE16A6NNV3 312 aaPredicted RBP12.2□□□□□ -0.46
NF1-214ENST00000490416 PHF14O94880 888 aa12.19□□□□□ -0.46
NF1-214ENST00000490416 PTPREP23469 700 aa12.19□□□□□ -0.46
NF1-214ENST00000490416 PDIA6Q15084 440 aa12.18□□□□□ -0.46
NF1-214ENST00000490416 DMRTA1Q5VZB9 504 aa12.18□□□□□ -0.46
NF1-214ENST00000490416 TYW1BQ6NUM6 668 aa12.18□□□□□ -0.46
NF1-214ENST00000490416 ARIH1Q9Y4X5 557 aaPredicted RBP12.18□□□□□ -0.46
NF1-214ENST00000490416 PCDHGA10Q9Y5H3 936 aa12.18□□□□□ -0.46
NF1-214ENST00000490416 FBXW7Q969H0 707 aa12.17□□□□□ -0.46
NF1-214ENST00000490416 ADAM33Q9BZ11 813 aa12.17□□□□□ -0.46
NF1-214ENST00000490416 MYT1LQ9UL68 1186 aa12.17□□□□□ -0.46
NF1-214ENST00000490416 TK2O00142 265 aa12.16□□□□□ -0.46
NF1-214ENST00000490416 ADGRD1Q6QNK2 874 aa12.16□□□□□ -0.46
NF1-214ENST00000490416 EPAS1Q99814 870 aa12.16□□□□□ -0.46
NF1-214ENST00000490416 DDX12PQ92771 950 aa12.15□□□□□ -0.46
NF1-214ENST00000490416 RNF166Q96A37 237 aaPredicted RBP12.14□□□□□ -0.47
NF1-214ENST00000490416 HAP1P54257 671 aaPredicted RBP12.13□□□□□ -0.47
NF1-214ENST00000490416 STAC3Q96MF2 364 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms