RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 PCF11O94913 1555 aaKnown RBP26.26■■□□□ 1.79
PLOD3-216ENST00000489927 LMTK3Q96Q04 1460 aa26.25■■□□□ 1.79
PLOD3-216ENST00000489927 POGZQ7Z3K3 1410 aa26.25■■□□□ 1.79
PLOD3-216ENST00000489927 CDK11AQ9UQ88 783 aaPredicted RBP26.22■■□□□ 1.79
PLOD3-216ENST00000489927 KIF14Q15058 1648 aa26.21■■□□□ 1.79
PLOD3-216ENST00000489927 EFCAB2Q5VUJ9 269 aa26.2■■□□□ 1.78
PLOD3-216ENST00000489927 MYO5CQ9NQX4 1742 aa26.19■■□□□ 1.78
PLOD3-216ENST00000489927 TROQ12816 1431 aaPredicted RBP26.17■■□□□ 1.78
PLOD3-216ENST00000489927 MLECQ14165 292 aa26.17■■□□□ 1.78
PLOD3-216ENST00000489927 PLPPR3Q6T4P5 718 aa26.17■■□□□ 1.78
PLOD3-216ENST00000489927 ATP10AO60312 1499 aa26.13■■□□□ 1.77
PLOD3-216ENST00000489927 LRRIQ1Q96JM4 1722 aa26.13■■□□□ 1.77
PLOD3-216ENST00000489927 FBXO41Q8TF61 875 aa26.12■■□□□ 1.77
PLOD3-216ENST00000489927 CLIP1P30622 1438 aa26.12■■□□□ 1.77
PLOD3-216ENST00000489927 ARHGAP5Q13017 1502 aa26.11■■□□□ 1.77
PLOD3-216ENST00000489927 HSPA2P54652 639 aa26.11■■□□□ 1.77
PLOD3-216ENST00000489927 C9orf84Q5VXU9 1444 aa26.11■■□□□ 1.77
PLOD3-216ENST00000489927 FER1L4A9Z1Z3 1794 aa26.1■■□□□ 1.77
PLOD3-216ENST00000489927 ZNF518AQ6AHZ1 1483 aa26.09■■□□□ 1.77
PLOD3-216ENST00000489927 AFAP1Q8N556 730 aa26.07■■□□□ 1.76
PLOD3-216ENST00000489927 ARHGEF12Q9NZN5 1544 aa26.07■■□□□ 1.76
PLOD3-216ENST00000489927 KDM5CP41229 1560 aa26.05■■□□□ 1.76
PLOD3-216ENST00000489927 CASKIN1Q8WXD9 1431 aa26.04■■□□□ 1.76
PLOD3-216ENST00000489927 CCDC18Q5T9S5 1454 aa26.01■■□□□ 1.75
PLOD3-216ENST00000489927 CDC42BPBQ9Y5S2 1711 aa26.01■■□□□ 1.75
PLOD3-216ENST00000489927 MYT1LQ9UL68 1186 aa25.99■■□□□ 1.75
PLOD3-216ENST00000489927 PREX2Q70Z35 1606 aa25.98■■□□□ 1.75
PLOD3-216ENST00000489927 DIP2CQ9Y2E4 1556 aa25.98■■□□□ 1.75
PLOD3-216ENST00000489927 CEBPAP49715 358 aaPredicted RBP25.96■■□□□ 1.75
PLOD3-216ENST00000489927 MLH3Q9UHC1 1453 aa25.95■■□□□ 1.74
PLOD3-216ENST00000489927 ABCC1P33527 1531 aa25.94■■□□□ 1.74
PLOD3-216ENST00000489927 TRAPPC8Q9Y2L5 1435 aa25.94■■□□□ 1.74
PLOD3-216ENST00000489927 ABCA6Q8N139 1617 aa25.93■■□□□ 1.74
PLOD3-216ENST00000489927 REREQ9P2R6 1566 aa25.93■■□□□ 1.74
PLOD3-216ENST00000489927 FYCO1Q9BQS8 1478 aa25.91■■□□□ 1.74
PLOD3-216ENST00000489927 PREX1Q8TCU6 1659 aa25.91■■□□□ 1.74
PLOD3-216ENST00000489927 ITSN2Q9NZM3 1697 aa25.9■■□□□ 1.74
PLOD3-216ENST00000489927 CDC42BPAQ5VT25 1732 aa25.88■■□□□ 1.73
PLOD3-216ENST00000489927 AGLP35573 1532 aa25.84■■□□□ 1.73
PLOD3-216ENST00000489927 KIDINS220Q9ULH0 1771 aa25.83■■□□□ 1.73
PLOD3-216ENST00000489927 UHRF1BP1Q6BDS2 1440 aa25.82■■□□□ 1.72
PLOD3-216ENST00000489927 CERKQ8TCT0 537 aa25.82■■□□□ 1.72
PLOD3-216ENST00000489927 ZNF777Q9ULD5 760 aaPredicted RBP25.81■■□□□ 1.72
PLOD3-216ENST00000489927 GPATCH8Q9UKJ3 1502 aaKnown RBP25.8■■□□□ 1.72
PLOD3-216ENST00000489927 SAMD9LQ8IVG5 1584 aa25.8■■□□□ 1.72
PLOD3-216ENST00000489927 C3P01024 1663 aa25.8■■□□□ 1.72
PLOD3-216ENST00000489927 ESF1Q9H501 851 aaKnown RBP25.79■■□□□ 1.72
PLOD3-216ENST00000489927 SYCP2Q9BX26 1530 aa25.77■■□□□ 1.72
PLOD3-216ENST00000489927 STRCQ7RTU9 1775 aa25.76■■□□□ 1.71
PLOD3-216ENST00000489927 HNRNPMP52272 730 aaKnown RBP eCLIP25.74■■□□□ 1.71
PLOD3-216ENST00000489927 SETD1BQ9UPS6 1966 aaKnown RBP25.73■■□□□ 1.71
PLOD3-216ENST00000489927 DMRT2Q9Y5R5 561 aa25.73■■□□□ 1.71
PLOD3-216ENST00000489927 SPAG9O60271 1321 aaKnown RBP25.72■■□□□ 1.71
PLOD3-216ENST00000489927 CNTLNQ9NXG0 1405 aa25.71■■□□□ 1.71
PLOD3-216ENST00000489927 CFDP1Q9UEE9 299 aaPredicted RBP25.71■■□□□ 1.71
PLOD3-216ENST00000489927 KIAA1107Q9UPP5 1409 aa25.7■■□□□ 1.7
PLOD3-216ENST00000489927 CCNB3Q8WWL7 1395 aa25.69■■□□□ 1.7
PLOD3-216ENST00000489927 MTUS2Q5JR59 1369 aa25.68■■□□□ 1.7
PLOD3-216ENST00000489927 PLEKHH2Q8IVE3 1493 aa25.67■■□□□ 1.7
PLOD3-216ENST00000489927 ATP7AQ04656 1500 aa25.67■■□□□ 1.7
PLOD3-216ENST00000489927 INO80Q9ULG1 1556 aaPredicted RBP25.65■■□□□ 1.7
PLOD3-216ENST00000489927 SUPT6HQ7KZ85 1726 aaKnown RBP25.64■■□□□ 1.7
PLOD3-216ENST00000489927 PTPRTO14522 1441 aa25.63■■□□□ 1.69
PLOD3-216ENST00000489927 MROH2AA6NES4 1674 aa25.62■■□□□ 1.69
PLOD3-216ENST00000489927 PLXNC1O60486 1568 aa25.62■■□□□ 1.69
PLOD3-216ENST00000489927 ZMYM3Q14202 1370 aa25.62■■□□□ 1.69
PLOD3-216ENST00000489927 A2MP01023 1474 aa25.61■■□□□ 1.69
PLOD3-216ENST00000489927 NPATQ14207 1427 aa25.61■■□□□ 1.69
PLOD3-216ENST00000489927 TIAM1Q13009 1591 aa25.59■■□□□ 1.69
PLOD3-216ENST00000489927 ZNF644Q9H582 1327 aaPredicted RBP25.59■■□□□ 1.69
PLOD3-216ENST00000489927 NCOA1Q15788 1441 aa25.58■■□□□ 1.69
PLOD3-216ENST00000489927 EHBP1L1Q8N3D4 1523 aa25.58■■□□□ 1.68
PLOD3-216ENST00000489927 CLTCQ00610 1675 aaKnown RBP25.56■■□□□ 1.68
PLOD3-216ENST00000489927 MBD5Q9P267 1494 aa25.54■■□□□ 1.68
PLOD3-216ENST00000489927 GGT6Q6P531 493 aa25.54■■□□□ 1.68
PLOD3-216ENST00000489927 CAMSAP1Q5T5Y3 1602 aa25.53■■□□□ 1.68
PLOD3-216ENST00000489927 CEP162Q5TB80 1403 aa25.53■■□□□ 1.68
PLOD3-216ENST00000489927 LTBP4Q8N2S1 1624 aa25.51■■□□□ 1.67
PLOD3-216ENST00000489927 ADGBQ8N7X0 1667 aa25.51■■□□□ 1.67
PLOD3-216ENST00000489927 PTPRKQ15262 1439 aa25.49■■□□□ 1.67
PLOD3-216ENST00000489927 MYO3AQ8NEV4 1616 aa25.48■■□□□ 1.67
PLOD3-216ENST00000489927 RTEL1-TNFRSF6BF6WH68 1400 aa25.46■■□□□ 1.67
PLOD3-216ENST00000489927 PPP6R1Q9UPN7 881 aa25.46■■□□□ 1.67
PLOD3-216ENST00000489927 NCKAP5LQ9HCH0 1330 aa25.45■■□□□ 1.66
PLOD3-216ENST00000489927 ZNF142P52746 1687 aaPredicted RBP25.45■■□□□ 1.66
PLOD3-216ENST00000489927 NCOA2Q15596 1464 aa25.44■■□□□ 1.66
PLOD3-216ENST00000489927 CEP170BQ9Y4F5 1589 aaPredicted RBP25.44■■□□□ 1.66
PLOD3-216ENST00000489927 DHX29Q7Z478 1369 aaKnown RBP25.43■■□□□ 1.66
PLOD3-216ENST00000489927 PLA2R1Q13018 1463 aa25.4■■□□□ 1.66
PLOD3-216ENST00000489927 CCDC141Q6ZP82 1450 aa25.4■■□□□ 1.66
PLOD3-216ENST00000489927 CAMSAP2Q08AD1 1489 aa25.4■■□□□ 1.66
PLOD3-216ENST00000489927 IQSEC2Q5JU85 1478 aa25.4■■□□□ 1.66
PLOD3-216ENST00000489927 PKD2Q13563 968 aa25.38■■□□□ 1.65
PLOD3-216ENST00000489927 TCOF1Q13428 1488 aaKnown RBP25.38■■□□□ 1.65
PLOD3-216ENST00000489927 ZNF335Q9H4Z2 1342 aaPredicted RBP25.37■■□□□ 1.65
PLOD3-216ENST00000489927 KIF3BO15066 747 aa25.36■■□□□ 1.65
PLOD3-216ENST00000489927 RSPH4AQ5TD94 716 aa25.34■■□□□ 1.65
PLOD3-216ENST00000489927 A2ML1A8K2U0 1454 aa25.34■■□□□ 1.65
PLOD3-216ENST00000489927 DISP3Q9P2K9 1392 aa25.32■■□□□ 1.64
PLOD3-216ENST00000489927 DNMT1P26358 1616 aaKnown RBP25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms