RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 CDC42BPBQ9Y5S2 1711 aa17.46■□□□□ 0.39
CPSF7-212ENST00000489728 EFCAB2Q5VUJ9 269 aa17.45■□□□□ 0.38
CPSF7-212ENST00000489728 ITSN2Q9NZM3 1697 aa17.45■□□□□ 0.38
CPSF7-212ENST00000489728 GPATCH8Q9UKJ3 1502 aaKnown RBP17.43■□□□□ 0.38
CPSF7-212ENST00000489728 DENND4BO75064 1496 aaPredicted RBP17.43■□□□□ 0.38
CPSF7-212ENST00000489728 ADGRL1O94910 1474 aa17.43■□□□□ 0.38
CPSF7-212ENST00000489728 CCNB3Q8WWL7 1395 aa17.42■□□□□ 0.38
CPSF7-212ENST00000489728 APLP2Q06481 763 aa17.42■□□□□ 0.38
CPSF7-212ENST00000489728 NCOA2Q15596 1464 aa17.42■□□□□ 0.38
CPSF7-212ENST00000489728 RICTORQ6R327 1708 aa17.41■□□□□ 0.38
CPSF7-212ENST00000489728 FRMPD1Q5SYB0 1578 aa17.41■□□□□ 0.38
CPSF7-212ENST00000489728 ZMYM4Q5VZL5 1548 aa17.4■□□□□ 0.38
CPSF7-212ENST00000489728 ABCC1P33527 1531 aa17.39■□□□□ 0.37
CPSF7-212ENST00000489728 POGZQ7Z3K3 1410 aa17.38■□□□□ 0.37
CPSF7-212ENST00000489728 PLEKHH2Q8IVE3 1493 aa17.38■□□□□ 0.37
CPSF7-212ENST00000489728 SCAPERQ9BY12 1400 aa17.38■□□□□ 0.37
CPSF7-212ENST00000489728 ZNF518AQ6AHZ1 1483 aa17.37■□□□□ 0.37
CPSF7-212ENST00000489728 MAGI2Q86UL8 1455 aa17.36■□□□□ 0.37
CPSF7-212ENST00000489728 SAMD9LQ8IVG5 1584 aa17.36■□□□□ 0.37
CPSF7-212ENST00000489728 KIAA1107Q9UPP5 1409 aa17.35■□□□□ 0.37
CPSF7-212ENST00000489728 KDM5CP41229 1560 aa17.35■□□□□ 0.37
CPSF7-212ENST00000489728 CFDP1Q9UEE9 299 aaPredicted RBP17.34■□□□□ 0.37
CPSF7-212ENST00000489728 RAPGEF3O95398 923 aa17.33■□□□□ 0.36
CPSF7-212ENST00000489728 KANK4Q5T7N3 995 aaPredicted RBP17.33■□□□□ 0.36
CPSF7-212ENST00000489728 ARHGEF40Q8TER5 1519 aa17.32■□□□□ 0.36
CPSF7-212ENST00000489728 MYOM3Q5VTT5 1437 aa17.3■□□□□ 0.36
CPSF7-212ENST00000489728 MIA2Q96PC5 1412 aa17.3■□□□□ 0.36
CPSF7-212ENST00000489728 SYCP2Q9BX26 1530 aa17.3■□□□□ 0.36
CPSF7-212ENST00000489728 ZFYVE16Q7Z3T8 1539 aa17.29■□□□□ 0.36
CPSF7-212ENST00000489728 ARHGEF12Q9NZN5 1544 aa17.29■□□□□ 0.36
CPSF7-212ENST00000489728 HECW2Q9P2P5 1572 aa17.28■□□□□ 0.36
CPSF7-212ENST00000489728 MLH3Q9UHC1 1453 aa17.28■□□□□ 0.36
CPSF7-212ENST00000489728 CAMSAP2Q08AD1 1489 aa17.26■□□□□ 0.35
CPSF7-212ENST00000489728 TRAPPC8Q9Y2L5 1435 aa17.26■□□□□ 0.35
CPSF7-212ENST00000489728 ZNF777Q9ULD5 760 aaPredicted RBP17.25■□□□□ 0.35
CPSF7-212ENST00000489728 MBD5Q9P267 1494 aa17.24■□□□□ 0.35
CPSF7-212ENST00000489728 ARHGEF5Q12774 1597 aa17.23■□□□□ 0.35
CPSF7-212ENST00000489728 RSPH4AQ5TD94 716 aa17.23■□□□□ 0.35
CPSF7-212ENST00000489728 REREQ9P2R6 1566 aa17.23■□□□□ 0.35
CPSF7-212ENST00000489728 AFAP1Q8N556 730 aa17.22■□□□□ 0.35
CPSF7-212ENST00000489728 INO80Q9ULG1 1556 aaPredicted RBP17.22■□□□□ 0.35
CPSF7-212ENST00000489728 CCDC141Q6ZP82 1450 aa17.21■□□□□ 0.35
CPSF7-212ENST00000489728 FGD6Q6ZV73 1430 aa17.21■□□□□ 0.34
CPSF7-212ENST00000489728 YEATS2Q9ULM3 1422 aa17.21■□□□□ 0.34
CPSF7-212ENST00000489728 ATP10AO60312 1499 aa17.2■□□□□ 0.34
CPSF7-212ENST00000489728 KIDINS220Q9ULH0 1771 aa17.2■□□□□ 0.34
CPSF7-212ENST00000489728 ZNF644Q9H582 1327 aaPredicted RBP17.2■□□□□ 0.34
CPSF7-212ENST00000489728 DIP2CQ9Y2E4 1556 aa17.19■□□□□ 0.34
CPSF7-212ENST00000489728 TCOF1Q13428 1488 aaKnown RBP17.19■□□□□ 0.34
CPSF7-212ENST00000489728 HNRNPMP52272 730 aaKnown RBP eCLIP17.19■□□□□ 0.34
CPSF7-212ENST00000489728 ATP7AQ04656 1500 aa17.19■□□□□ 0.34
CPSF7-212ENST00000489728 RTEL1-TNFRSF6BF6WH68 1400 aa17.19■□□□□ 0.34
CPSF7-212ENST00000489728 C9orf84Q5VXU9 1444 aa17.19■□□□□ 0.34
CPSF7-212ENST00000489728 ABCA6Q8N139 1617 aa17.18■□□□□ 0.34
CPSF7-212ENST00000489728 PTPN23Q9H3S7 1636 aa17.18■□□□□ 0.34
CPSF7-212ENST00000489728 SPAG9O60271 1321 aaKnown RBP17.18■□□□□ 0.34
CPSF7-212ENST00000489728 MAST1Q9Y2H9 1570 aa17.15■□□□□ 0.34
CPSF7-212ENST00000489728 AGLP35573 1532 aa17.14■□□□□ 0.33
CPSF7-212ENST00000489728 ADGBQ8N7X0 1667 aa17.13■□□□□ 0.33
CPSF7-212ENST00000489728 SHANK2Q9UPX8 1470 aa17.13■□□□□ 0.33
CPSF7-212ENST00000489728 BCORL1Q5H9F3 1711 aa17.13■□□□□ 0.33
CPSF7-212ENST00000489728 CROCC2H7BZ55 1655 aa17.12■□□□□ 0.33
CPSF7-212ENST00000489728 PLXNC1O60486 1568 aa17.11■□□□□ 0.33
CPSF7-212ENST00000489728 DNMT1P26358 1616 aaKnown RBP17.11■□□□□ 0.33
CPSF7-212ENST00000489728 MYT1LQ9UL68 1186 aa17.11■□□□□ 0.33
CPSF7-212ENST00000489728 ADAMTSL3P82987 1691 aa17.1■□□□□ 0.33
CPSF7-212ENST00000489728 SIGLEC1Q9BZZ2 1709 aa17.1■□□□□ 0.33
CPSF7-212ENST00000489728 TSPY4P0CV99 314 aa17.09■□□□□ 0.33
CPSF7-212ENST00000489728 TSPY10P0CW01 314 aa17.09■□□□□ 0.33
CPSF7-212ENST00000489728 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.09■□□□□ 0.33
CPSF7-212ENST00000489728 A2MP01023 1474 aa17.08■□□□□ 0.32
CPSF7-212ENST00000489728 DAPK1P53355 1430 aa17.07■□□□□ 0.32
CPSF7-212ENST00000489728 ARID4BQ4LE39 1312 aaPredicted RBP17.07■□□□□ 0.32
CPSF7-212ENST00000489728 KDM4FA0A1W2PPD8 638 aa17.07■□□□□ 0.32
CPSF7-212ENST00000489728 ABCC5O15440 1437 aa17.06■□□□□ 0.32
CPSF7-212ENST00000489728 RRBP1Q9P2E9 1410 aaKnown RBP17.03■□□□□ 0.32
CPSF7-212ENST00000489728 DHX29Q7Z478 1369 aaKnown RBP17.02■□□□□ 0.32
CPSF7-212ENST00000489728 MADDQ8WXG6 1647 aa17.02■□□□□ 0.31
CPSF7-212ENST00000489728 ADGRL2O95490 1459 aa17.01■□□□□ 0.31
CPSF7-212ENST00000489728 EIF2AK4Q9P2K8 1649 aaKnown RBP17.01■□□□□ 0.31
CPSF7-212ENST00000489728 FER1L4A9Z1Z3 1794 aa17.01■□□□□ 0.31
CPSF7-212ENST00000489728 DUOX2Q9NRD8 1548 aa17.01■□□□□ 0.31
CPSF7-212ENST00000489728 FAM135AQ9P2D6 1515 aa17.01■□□□□ 0.31
CPSF7-212ENST00000489728 FAM50AQ14320 339 aaKnown RBP16.99■□□□□ 0.31
CPSF7-212ENST00000489728 ANKRD30AQ9BXX3 1397 aa16.98■□□□□ 0.31
CPSF7-212ENST00000489728 CNTLNQ9NXG0 1405 aa16.97■□□□□ 0.31
CPSF7-212ENST00000489728 AEBP2Q6ZN18 517 aaPredicted RBP16.97■□□□□ 0.31
CPSF7-212ENST00000489728 PPARGC1BQ86YN6 1023 aaKnown RBP16.97■□□□□ 0.31
CPSF7-212ENST00000489728 PPP6R1Q9UPN7 881 aa16.97■□□□□ 0.31
CPSF7-212ENST00000489728 PTPRMP28827 1452 aa16.97■□□□□ 0.31
CPSF7-212ENST00000489728 RIMS1Q86UR5 1692 aaKnown RBP16.97■□□□□ 0.31
CPSF7-212ENST00000489728 ERBINQ96RT1 1412 aa16.96■□□□□ 0.31
CPSF7-212ENST00000489728 KIF15Q9NS87 1388 aa16.96■□□□□ 0.31
CPSF7-212ENST00000489728 NCOA1Q15788 1441 aa16.96■□□□□ 0.3
CPSF7-212ENST00000489728 RNF17Q9BXT8 1623 aaKnown RBP16.95■□□□□ 0.3
CPSF7-212ENST00000489728 MROH2AA6NES4 1674 aa16.94■□□□□ 0.3
CPSF7-212ENST00000489728 ROCK1Q13464 1354 aa16.94■□□□□ 0.3
CPSF7-212ENST00000489728 MLECQ14165 292 aa16.92■□□□□ 0.3
CPSF7-212ENST00000489728 KDM5DQ9BY66 1539 aa16.9■□□□□ 0.3
CPSF7-212ENST00000489728 PTPRKQ15262 1439 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms