RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.09□□□□□ -1.27
CALD1-221ENST00000489019 CFAP44Q96MT7 982 aa7.08□□□□□ -1.28
CALD1-221ENST00000489019 FAM163AQ96GL9 167 aaPredicted RBP7.07□□□□□ -1.28
CALD1-221ENST00000489019 HOXB3P14651 431 aaPredicted RBP7.06□□□□□ -1.28
CALD1-221ENST00000489019 CADPS2Q86UW7 1296 aa7.06□□□□□ -1.28
CALD1-221ENST00000489019 NCKAP5LQ9HCH0 1330 aa7.05□□□□□ -1.28
CALD1-221ENST00000489019 ST18O60284 1047 aa7.04□□□□□ -1.28
CALD1-221ENST00000489019 TMC2Q8TDI7 906 aa7.04□□□□□ -1.28
CALD1-221ENST00000489019 CRISPLD2Q9H0B8 497 aa7.04□□□□□ -1.28
CALD1-221ENST00000489019 GPHNQ9NQX3 736 aaPredicted RBP7.04□□□□□ -1.28
CALD1-221ENST00000489019 SNPHO15079 494 aa7.03□□□□□ -1.28
CALD1-221ENST00000489019 FOXK1P85037 733 aa7.02□□□□□ -1.29
CALD1-221ENST00000489019 DSG2Q14126 1118 aa7.02□□□□□ -1.29
CALD1-221ENST00000489019 PDE4AP27815 886 aa6.99□□□□□ -1.29
CALD1-221ENST00000489019 DOK7Q18PE1 504 aa6.99□□□□□ -1.29
CALD1-221ENST00000489019 PLPP6Q8IY26 295 aa6.99□□□□□ -1.29
CALD1-221ENST00000489019 LARP6Q9BRS8 491 aaKnown RBP6.98□□□□□ -1.29
CALD1-221ENST00000489019 POTEMA6NI47 508 aa6.97□□□□□ -1.29
CALD1-221ENST00000489019 PLCB2Q00722 1185 aa6.97□□□□□ -1.29
CALD1-221ENST00000489019 MFSD10Q14728 455 aa6.97□□□□□ -1.29
CALD1-221ENST00000489019 PPP1R15BQ5SWA1 713 aa6.97□□□□□ -1.29
CALD1-221ENST00000489019 GPR153Q6NV75 609 aa6.97□□□□□ -1.29
CALD1-221ENST00000489019 ZNF710Q8N1W2 664 aa6.97□□□□□ -1.29
CALD1-221ENST00000489019 MARVELD3Q96A59 401 aa6.97□□□□□ -1.29
CALD1-221ENST00000489019 POTEGQ6S5H5 508 aa6.96□□□□□ -1.3
CALD1-221ENST00000489019 TSHZ2Q9NRE2 1034 aa6.96□□□□□ -1.3
CALD1-221ENST00000489019 SLC34A2O95436 690 aa6.95□□□□□ -1.3
CALD1-221ENST00000489019 HOXB1P14653 301 aaPredicted RBP6.95□□□□□ -1.3
CALD1-221ENST00000489019 KHSRPQ92945 711 aaKnown RBP eCLIP6.95□□□□□ -1.3
CALD1-221ENST00000489019 DDX27Q96GQ7 796 aaKnown RBP6.95□□□□□ -1.3
CALD1-221ENST00000489019 RIMBP2O15034 1052 aa6.94□□□□□ -1.3
CALD1-221ENST00000489019 ARSIQ5FYB1 569 aa6.94□□□□□ -1.3
CALD1-221ENST00000489019 ZSWIM6Q9HCJ5 1215 aa6.94□□□□□ -1.3
CALD1-221ENST00000489019 PTCD2Q8WV60 388 aaKnown RBP6.93□□□□□ -1.3
CALD1-221ENST00000489019 PCDHGA4Q9Y5G9 962 aa6.93□□□□□ -1.3
CALD1-221ENST00000489019 POTEB3A0JP26 581 aa6.91□□□□□ -1.3
CALD1-221ENST00000489019 EMP3P54852 163 aa6.91□□□□□ -1.3
CALD1-221ENST00000489019 POTEBQ6S5H4 581 aa6.91□□□□□ -1.3
CALD1-221ENST00000489019 NUDT7P0C024 238 aa6.9□□□□□ -1.3
CALD1-221ENST00000489019 UPF1Q92900 1129 aaKnown RBP eCLIP6.9□□□□□ -1.3
CALD1-221ENST00000489019 EMILIN3Q9NT22 766 aa6.9□□□□□ -1.3
CALD1-221ENST00000489019 KDM4FA0A1W2PPD8 638 aa6.89□□□□□ -1.31
CALD1-221ENST00000489019 FAM205CA6NFA0 338 aa6.89□□□□□ -1.31
CALD1-221ENST00000489019 OXER1Q8TDS5 423 aa6.89□□□□□ -1.31
CALD1-221ENST00000489019 CAMK2BQ13554 666 aa6.88□□□□□ -1.31
CALD1-221ENST00000489019 HS3ST6Q96QI5 342 aa6.88□□□□□ -1.31
CALD1-221ENST00000489019 ERBB3P21860 1342 aa6.86□□□□□ -1.31
CALD1-221ENST00000489019 HAP1P54257 671 aaPredicted RBP6.85□□□□□ -1.31
CALD1-221ENST00000489019 VARS2Q5ST30 1063 aaKnown RBP6.85□□□□□ -1.31
CALD1-221ENST00000489019 LHX6Q9UPM6 363 aa6.85□□□□□ -1.31
CALD1-221ENST00000489019 ZNF316A6NFI3 1004 aaPredicted RBP6.84□□□□□ -1.31
CALD1-221ENST00000489019 TBC1D12O60347 775 aa6.84□□□□□ -1.31
CALD1-221ENST00000489019 CDAN1Q8IWY9 1227 aa6.84□□□□□ -1.31
CALD1-221ENST00000489019 E2F4Q16254 413 aa6.83□□□□□ -1.32
CALD1-221ENST00000489019 WDR70Q9NW82 654 aa6.83□□□□□ -1.32
CALD1-221ENST00000489019 DPYSL4O14531 572 aa6.82□□□□□ -1.32
CALD1-221ENST00000489019 MAP3K9P80192 1104 aa6.82□□□□□ -1.32
CALD1-221ENST00000489019 EVI5O60447 810 aa6.81□□□□□ -1.32
CALD1-221ENST00000489019 ANO8Q9HCE9 1232 aaPredicted RBP6.8□□□□□ -1.32
CALD1-221ENST00000489019 KDM2AQ9Y2K7 1162 aa6.8□□□□□ -1.32
CALD1-221ENST00000489019 ZNF687Q8N1G0 1237 aa6.79□□□□□ -1.32
CALD1-221ENST00000489019 KRTAP3-3Q9BYR6 98 aa6.79□□□□□ -1.32
CALD1-221ENST00000489019 KRTAP3-2Q9BYR7 98 aa6.79□□□□□ -1.32
CALD1-221ENST00000489019 PCDH10Q9P2E7 1040 aa6.79□□□□□ -1.32
CALD1-221ENST00000489019 POTEEQ6S8J3 1075 aa6.78□□□□□ -1.32
CALD1-221ENST00000489019 KCNV2Q8TDN2 545 aa6.78□□□□□ -1.32
CALD1-221ENST00000489019 ARIH1Q9Y4X5 557 aaPredicted RBP6.77□□□□□ -1.33
CALD1-221ENST00000489019 PDIA6Q15084 440 aa6.76□□□□□ -1.33
CALD1-221ENST00000489019 PSDA5PKW4 1024 aaPredicted RBP6.75□□□□□ -1.33
CALD1-221ENST00000489019 FOSBP53539 338 aa6.75□□□□□ -1.33
CALD1-221ENST00000489019 ZNF454Q8N9F8 522 aa6.75□□□□□ -1.33
CALD1-221ENST00000489019 JPH4Q96JJ6 628 aa6.74□□□□□ -1.33
CALD1-221ENST00000489019 AXIN2Q9Y2T1 843 aa6.74□□□□□ -1.33
CALD1-221ENST00000489019 PPP4R3BQ5MIZ7 849 aa6.73□□□□□ -1.33
CALD1-221ENST00000489019 VSIG10Q8N0Z9 540 aa6.73□□□□□ -1.33
CALD1-221ENST00000489019 ARHGEF1Q92888 912 aaKnown RBP6.73□□□□□ -1.33
CALD1-221ENST00000489019 PCDHGA10Q9Y5H3 936 aa6.73□□□□□ -1.33
CALD1-221ENST00000489019 PTGER2P43116 358 aa6.72□□□□□ -1.33
CALD1-221ENST00000489019 DDX12PQ92771 950 aa6.72□□□□□ -1.33
CALD1-221ENST00000489019 SPDYE16A6NNV3 312 aaPredicted RBP6.71□□□□□ -1.34
CALD1-221ENST00000489019 PSEN2P49810 448 aa6.71□□□□□ -1.34
CALD1-221ENST00000489019 PHF14O94880 888 aa6.7□□□□□ -1.34
CALD1-221ENST00000489019 ZDHHC16Q969W1 377 aa6.7□□□□□ -1.34
CALD1-221ENST00000489019 ADAM33Q9BZ11 813 aa6.7□□□□□ -1.34
CALD1-221ENST00000489019 ARHGAP33O14559 1287 aa6.69□□□□□ -1.34
CALD1-221ENST00000489019 PBX2P40425 430 aa6.69□□□□□ -1.34
CALD1-221ENST00000489019 P3H3Q8IVL6 736 aa6.69□□□□□ -1.34
CALD1-221ENST00000489019 BCL2L12Q9HB09 334 aa6.69□□□□□ -1.34
CALD1-221ENST00000489019 PRIM1P49642 420 aaKnown RBP6.68□□□□□ -1.34
CALD1-221ENST00000489019 LSM11P83369 360 aaKnown RBP eCLIP6.68□□□□□ -1.34
CALD1-221ENST00000489019 DMRTA1Q5VZB9 504 aa6.68□□□□□ -1.34
CALD1-221ENST00000489019 TYW1BQ6NUM6 668 aa6.68□□□□□ -1.34
CALD1-221ENST00000489019 KCNK17Q96T54 332 aa6.68□□□□□ -1.34
CALD1-221ENST00000489019 GRXCR2A6NFK2 248 aa6.67□□□□□ -1.34
CALD1-221ENST00000489019 MLLT3P42568 568 aaPredicted RBP6.67□□□□□ -1.34
CALD1-221ENST00000489019 NBR1Q14596 966 aa6.67□□□□□ -1.34
CALD1-221ENST00000489019 SPNS2Q8IVW8 549 aa6.67□□□□□ -1.34
CALD1-221ENST00000489019 ANKRD13DQ6ZTN6 518 aa6.66□□□□□ -1.34
CALD1-221ENST00000489019 FBXW7Q969H0 707 aa6.66□□□□□ -1.34
CALD1-221ENST00000489019 RBM33Q96EV2 1170 aaKnown RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms