RNA–Protein interactions for RNA: ENST00000488733.1

ATP1A1-208, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 2

Gene ATP1A1, Length 1,728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-208ENST00000488733 CFDP1Q9UEE9 299 aaPredicted RBP29.84■■■□□ 2.37
ATP1A1-208ENST00000488733 CDC42BPAQ5VT25 1732 aa29.83■■■□□ 2.37
ATP1A1-208ENST00000488733 PTPRKQ15262 1439 aa29.79■■■□□ 2.36
ATP1A1-208ENST00000488733 PREX2Q70Z35 1606 aa29.77■■■□□ 2.36
ATP1A1-208ENST00000488733 HFM1A2PYH4 1435 aa29.76■■■□□ 2.35
ATP1A1-208ENST00000488733 ZNF644Q9H582 1327 aaPredicted RBP29.75■■■□□ 2.35
ATP1A1-208ENST00000488733 CAMSAP2Q08AD1 1489 aa29.75■■■□□ 2.35
ATP1A1-208ENST00000488733 MAPKBP1O60336 1514 aa29.73■■■□□ 2.35
ATP1A1-208ENST00000488733 ZNF777Q9ULD5 760 aaPredicted RBP29.72■■■□□ 2.35
ATP1A1-208ENST00000488733 MYO5CQ9NQX4 1742 aa29.72■■■□□ 2.35
ATP1A1-208ENST00000488733 CDC42BPBQ9Y5S2 1711 aa29.7■■■□□ 2.35
ATP1A1-208ENST00000488733 AKNAQ7Z591 1439 aa29.7■■■□□ 2.35
ATP1A1-208ENST00000488733 ABCA9Q8IUA7 1624 aa29.69■■■□□ 2.34
ATP1A1-208ENST00000488733 ARHGAP5Q13017 1502 aa29.69■■■□□ 2.34
ATP1A1-208ENST00000488733 PLCH2O75038 1416 aa29.68■■■□□ 2.34
ATP1A1-208ENST00000488733 NAIPQ13075 1403 aa29.67■■■□□ 2.34
ATP1A1-208ENST00000488733 DNMT1P26358 1616 aaKnown RBP29.66■■■□□ 2.34
ATP1A1-208ENST00000488733 DAPK1P53355 1430 aa29.65■■■□□ 2.34
ATP1A1-208ENST00000488733 ARAP3Q8WWN8 1544 aa29.63■■■□□ 2.33
ATP1A1-208ENST00000488733 SAMD9LQ8IVG5 1584 aa29.62■■■□□ 2.33
ATP1A1-208ENST00000488733 ROCK1Q13464 1354 aa29.61■■■□□ 2.33
ATP1A1-208ENST00000488733 ABCC5O15440 1437 aa29.61■■■□□ 2.33
ATP1A1-208ENST00000488733 GCC2Q8IWJ2 1684 aa29.59■■■□□ 2.33
ATP1A1-208ENST00000488733 EFCAB2Q5VUJ9 269 aa29.58■■■□□ 2.33
ATP1A1-208ENST00000488733 CHIC2Q9UKJ5 165 aa29.57■■■□□ 2.32
ATP1A1-208ENST00000488733 ACIN1Q9UKV3 1341 aaKnown RBP29.57■■■□□ 2.32
ATP1A1-208ENST00000488733 PLEKHH2Q8IVE3 1493 aa29.55■■■□□ 2.32
ATP1A1-208ENST00000488733 RRP7BPQ9NSQ0 103 aa29.54■■■□□ 2.32
ATP1A1-208ENST00000488733 MBD5Q9P267 1494 aa29.52■■■□□ 2.32
ATP1A1-208ENST00000488733 ARHGEF5Q12774 1597 aa29.52■■■□□ 2.32
ATP1A1-208ENST00000488733 CD109Q6YHK3 1445 aa29.52■■■□□ 2.32
ATP1A1-208ENST00000488733 KIAA1107Q9UPP5 1409 aa29.52■■■□□ 2.32
ATP1A1-208ENST00000488733 SYCP2Q9BX26 1530 aa29.51■■■□□ 2.32
ATP1A1-208ENST00000488733 HNRNPMP52272 730 aaKnown RBP eCLIP29.51■■■□□ 2.315e-10■■■■■ 43.1
ATP1A1-208ENST00000488733 FANCAO15360 1455 aa29.5■■■□□ 2.31
ATP1A1-208ENST00000488733 CROCC2H7BZ55 1655 aa29.5■■■□□ 2.31
ATP1A1-208ENST00000488733 ABCC1P33527 1531 aa29.48■■■□□ 2.31
ATP1A1-208ENST00000488733 GLI2P10070 1586 aa29.47■■■□□ 2.31
ATP1A1-208ENST00000488733 CCDC141Q6ZP82 1450 aa29.47■■■□□ 2.31
ATP1A1-208ENST00000488733 SHANK2Q9UPX8 1470 aa29.47■■■□□ 2.31
ATP1A1-208ENST00000488733 RSPH4AQ5TD94 716 aa29.46■■■□□ 2.31
ATP1A1-208ENST00000488733 DNAJC5Q9H3Z4 198 aa29.45■■■□□ 2.31
ATP1A1-208ENST00000488733 DIP2BQ9P265 1576 aa29.45■■■□□ 2.31
ATP1A1-208ENST00000488733 ARHGEF12Q9NZN5 1544 aa29.44■■■□□ 2.3
ATP1A1-208ENST00000488733 ADGBQ8N7X0 1667 aa29.44■■■□□ 2.3
ATP1A1-208ENST00000488733 ADGRL2O95490 1459 aa29.43■■■□□ 2.3
ATP1A1-208ENST00000488733 C9orf84Q5VXU9 1444 aa29.42■■■□□ 2.3
ATP1A1-208ENST00000488733 TSPY4P0CV99 314 aa29.41■■■□□ 2.3
ATP1A1-208ENST00000488733 TSPY10P0CW01 314 aa29.41■■■□□ 2.3
ATP1A1-208ENST00000488733 MAP3K4Q9Y6R4 1608 aa29.41■■■□□ 2.3
ATP1A1-208ENST00000488733 FAM69CQ0P6D2 419 aa29.4■■■□□ 2.3
ATP1A1-208ENST00000488733 NCOA1Q15788 1441 aa29.39■■■□□ 2.3
ATP1A1-208ENST00000488733 ANKRD30AQ9BXX3 1397 aa29.38■■■□□ 2.29
ATP1A1-208ENST00000488733 CFAP74Q9C0B2 1584 aa29.38■■■□□ 2.29
ATP1A1-208ENST00000488733 ADGRL1O94910 1474 aa29.37■■■□□ 2.29
ATP1A1-208ENST00000488733 KDM6BO15054 1643 aa29.34■■■□□ 2.29
ATP1A1-208ENST00000488733 TRAPPC8Q9Y2L5 1435 aa29.34■■■□□ 2.29
ATP1A1-208ENST00000488733 TIMELESSQ9UNS1 1208 aa29.34■■■□□ 2.29
ATP1A1-208ENST00000488733 MAST1Q9Y2H9 1570 aa29.33■■■□□ 2.29
ATP1A1-208ENST00000488733 SCAPERQ9BY12 1400 aa29.32■■■□□ 2.28
ATP1A1-208ENST00000488733 NEO1Q92859 1461 aa29.31■■■□□ 2.28
ATP1A1-208ENST00000488733 TRIM52Q96A61 297 aa29.31■■■□□ 2.28
ATP1A1-208ENST00000488733 AFAP1Q8N556 730 aa29.25■■■□□ 2.27
ATP1A1-208ENST00000488733 KIF15Q9NS87 1388 aa29.25■■■□□ 2.27
ATP1A1-208ENST00000488733 KIF13AQ9H1H9 1805 aa29.24■■■□□ 2.27
ATP1A1-208ENST00000488733 SIN3AQ96ST3 1273 aa29.23■■■□□ 2.27
ATP1A1-208ENST00000488733 ZNF316A6NFI3 1004 aaPredicted RBP29.22■■■□□ 2.27
ATP1A1-208ENST00000488733 MPHOSPH9Q99550 1183 aa29.22■■■□□ 2.27
ATP1A1-208ENST00000488733 SPAG9O60271 1321 aaKnown RBP29.22■■■□□ 2.27
ATP1A1-208ENST00000488733 PLXNC1O60486 1568 aa29.22■■■□□ 2.27
ATP1A1-208ENST00000488733 ZNF518AQ6AHZ1 1483 aa29.2■■■□□ 2.27
ATP1A1-208ENST00000488733 ANKRD50Q9ULJ7 1429 aa29.2■■■□□ 2.27
ATP1A1-208ENST00000488733 NEUROD1Q13562 356 aa29.2■■■□□ 2.27
ATP1A1-208ENST00000488733 RTEL1-TNFRSF6BF6WH68 1400 aa29.2■■■□□ 2.26
ATP1A1-208ENST00000488733 POGZQ7Z3K3 1410 aa29.2■■■□□ 2.26
ATP1A1-208ENST00000488733 ZFYVE16Q7Z3T8 1539 aa29.19■■■□□ 2.26
ATP1A1-208ENST00000488733 TEX14Q8IWB6 1497 aa29.19■■■□□ 2.26
ATP1A1-208ENST00000488733 PPRC1Q5VV67 1664 aaKnown RBP29.18■■■□□ 2.26
ATP1A1-208ENST00000488733 TSPOAP1O95153 1857 aa29.17■■■□□ 2.26
ATP1A1-208ENST00000488733 INO80Q9ULG1 1556 aaPredicted RBP29.16■■■□□ 2.26
ATP1A1-208ENST00000488733 DENND4BO75064 1496 aaPredicted RBP29.15■■■□□ 2.26
ATP1A1-208ENST00000488733 ATP7AQ04656 1500 aa29.14■■■□□ 2.26
ATP1A1-208ENST00000488733 KDM5CP41229 1560 aa29.13■■■□□ 2.25
ATP1A1-208ENST00000488733 DUOX2Q9NRD8 1548 aa29.11■■■□□ 2.25
ATP1A1-208ENST00000488733 SLC4A1APQ9BWU0 796 aaKnown RBP29.09■■■□□ 2.25
ATP1A1-208ENST00000488733 TONSLQ96HA7 1378 aa29.07■■■□□ 2.24
ATP1A1-208ENST00000488733 RAPGEF3O95398 923 aa29.07■■■□□ 2.24
ATP1A1-208ENST00000488733 MYT1LQ9UL68 1186 aa29.07■■■□□ 2.24
ATP1A1-208ENST00000488733 PZPP20742 1482 aa29.06■■■□□ 2.24
ATP1A1-208ENST00000488733 MLH3Q9UHC1 1453 aa29.06■■■□□ 2.24
ATP1A1-208ENST00000488733 ERBINQ96RT1 1412 aa29.05■■■□□ 2.24
ATP1A1-208ENST00000488733 RICTORQ6R327 1708 aa29.04■■■□□ 2.24
ATP1A1-208ENST00000488733 KIDINS220Q9ULH0 1771 aa29.04■■■□□ 2.24
ATP1A1-208ENST00000488733 HECW2Q9P2P5 1572 aa29.04■■■□□ 2.24
ATP1A1-208ENST00000488733 KDM5DQ9BY66 1539 aa29.02■■■□□ 2.24
ATP1A1-208ENST00000488733 PPP1R15AO75807 674 aaPredicted RBP29.02■■■□□ 2.24
ATP1A1-208ENST00000488733 ANKRD30BQ9BXX2 1392 aa29.01■■■□□ 2.23
ATP1A1-208ENST00000488733 FRMPD1Q5SYB0 1578 aa29■■■□□ 2.23
ATP1A1-208ENST00000488733 NUP155O75694 1391 aa28.98■■■□□ 2.23
ATP1A1-208ENST00000488733 TRHP20396 242 aaPredicted RBP28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms