RNA–Protein interactions for RNA: ENST00000488421.1

ATG2B-204, Transcript of autophagy related 2B, humanhuman

TSL 4

Gene ATG2B, Length 522 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG2B-204ENST00000488421 SOX12O15370 315 aa12.54□□□□□ -0.4
ATG2B-204ENST00000488421 ZSWIM6Q9HCJ5 1215 aa12.5□□□□□ -0.41
ATG2B-204ENST00000488421 RIMBP2O15034 1052 aa12.49□□□□□ -0.41
ATG2B-204ENST00000488421 ECM2O94769 699 aaPredicted RBP12.49□□□□□ -0.41
ATG2B-204ENST00000488421 ZNF687Q8N1G0 1237 aa12.47□□□□□ -0.41
ATG2B-204ENST00000488421 FBXO22Q8NEZ5 403 aa12.46□□□□□ -0.41
ATG2B-204ENST00000488421 RNF166Q96A37 237 aaPredicted RBP12.45□□□□□ -0.42
ATG2B-204ENST00000488421 BCL11BQ9C0K0 894 aaPredicted RBP12.44□□□□□ -0.42
ATG2B-204ENST00000488421 ARSIQ5FYB1 569 aa12.43□□□□□ -0.42
ATG2B-204ENST00000488421 KHSRPQ92945 711 aaKnown RBP eCLIP12.43□□□□□ -0.42
ATG2B-204ENST00000488421 STK24Q9Y6E0 443 aa12.43□□□□□ -0.42
ATG2B-204ENST00000488421 NLRP6P59044 892 aa12.4□□□□□ -0.42
ATG2B-204ENST00000488421 MYT1LQ9UL68 1186 aa12.4□□□□□ -0.42
ATG2B-204ENST00000488421 STK25O00506 426 aa12.39□□□□□ -0.43
ATG2B-204ENST00000488421 PKD2Q13563 968 aa12.38□□□□□ -0.43
ATG2B-204ENST00000488421 MFRPQ9BY79 579 aa12.37□□□□□ -0.43
ATG2B-204ENST00000488421 KIF3CO14782 793 aa12.36□□□□□ -0.43
ATG2B-204ENST00000488421 ZNF316A6NFI3 1004 aaPredicted RBP12.34□□□□□ -0.43
ATG2B-204ENST00000488421 RGL2O15211 777 aa12.34□□□□□ -0.43
ATG2B-204ENST00000488421 C2orf72A6NCS6 295 aa12.29□□□□□ -0.44
ATG2B-204ENST00000488421 POTEEQ6S8J3 1075 aa12.29□□□□□ -0.44
ATG2B-204ENST00000488421 ANKRD13DQ6ZTN6 518 aa12.27□□□□□ -0.45
ATG2B-204ENST00000488421 LSM11P83369 360 aaKnown RBP eCLIP12.26□□□□□ -0.45
ATG2B-204ENST00000488421 NUDT7P0C024 238 aa12.24□□□□□ -0.45
ATG2B-204ENST00000488421 PTGER2P43116 358 aa12.24□□□□□ -0.45
ATG2B-204ENST00000488421 LHX6Q9UPM6 363 aa12.2□□□□□ -0.46
ATG2B-204ENST00000488421 PCDHGA4Q9Y5G9 962 aa12.2□□□□□ -0.46
ATG2B-204ENST00000488421 SLC34A2O95436 690 aa12.19□□□□□ -0.46
ATG2B-204ENST00000488421 AXIN2Q9Y2T1 843 aa12.18□□□□□ -0.46
ATG2B-204ENST00000488421 PPP1R37O75864 691 aa12.16□□□□□ -0.46
ATG2B-204ENST00000488421 KDM4FA0A1W2PPD8 638 aa12.14□□□□□ -0.47
ATG2B-204ENST00000488421 PBX2P40425 430 aa12.14□□□□□ -0.47
ATG2B-204ENST00000488421 HS6ST3Q8IZP7 471 aa12.1□□□□□ -0.47
ATG2B-204ENST00000488421 TMC2Q8TDI7 906 aa12.1□□□□□ -0.47
ATG2B-204ENST00000488421 CHGAP10645 457 aaKnown RBP12.07□□□□□ -0.48
ATG2B-204ENST00000488421 ADGRD1Q6QNK2 874 aa12.03□□□□□ -0.48
ATG2B-204ENST00000488421 PTCD2Q8WV60 388 aaKnown RBP12.02□□□□□ -0.49
ATG2B-204ENST00000488421 ARHGAP33O14559 1287 aa12.01□□□□□ -0.49
ATG2B-204ENST00000488421 DMRTA1Q5VZB9 504 aa12.01□□□□□ -0.49
ATG2B-204ENST00000488421 HRO43593 1189 aa12□□□□□ -0.49
ATG2B-204ENST00000488421 PSEN2P49810 448 aa11.98□□□□□ -0.49
ATG2B-204ENST00000488421 PLA2G2EQ9NZK7 142 aa11.98□□□□□ -0.49
ATG2B-204ENST00000488421 FOXK1P85037 733 aa11.96□□□□□ -0.49
ATG2B-204ENST00000488421 HCSTQ9UBK5 93 aa11.96□□□□□ -0.49
ATG2B-204ENST00000488421 PLPP6Q8IY26 295 aa11.95□□□□□ -0.5
ATG2B-204ENST00000488421 RYDENQ9NUL5 291 aaKnown RBP11.95□□□□□ -0.5
ATG2B-204ENST00000488421 TK2O00142 265 aa11.94□□□□□ -0.5
ATG2B-204ENST00000488421 PSDA5PKW4 1024 aaPredicted RBP11.93□□□□□ -0.5
ATG2B-204ENST00000488421 DSG2Q14126 1118 aa11.93□□□□□ -0.5
ATG2B-204ENST00000488421 DNAJC5Q9H3Z4 198 aa11.93□□□□□ -0.5
ATG2B-204ENST00000488421 GPHNQ9NQX3 736 aaPredicted RBP11.92□□□□□ -0.5
ATG2B-204ENST00000488421 NKX1-1Q15270 411 aaPredicted RBP11.9□□□□□ -0.5
ATG2B-204ENST00000488421 DCAF8L2P0C7V8 631 aa11.86□□□□□ -0.51
ATG2B-204ENST00000488421 TBC1D12O60347 775 aa11.84□□□□□ -0.51
ATG2B-204ENST00000488421 PPP4R3BQ5MIZ7 849 aa11.84□□□□□ -0.51
ATG2B-204ENST00000488421 OXER1Q8TDS5 423 aa11.83□□□□□ -0.52
ATG2B-204ENST00000488421 KCTD12Q96CX2 325 aaKnown RBP11.83□□□□□ -0.52
ATG2B-204ENST00000488421 KCNK17Q96T54 332 aa11.82□□□□□ -0.52
ATG2B-204ENST00000488421 VPS9D1Q9Y2B5 631 aa11.8□□□□□ -0.52
ATG2B-204ENST00000488421 CRISPLD2Q9H0B8 497 aa11.76□□□□□ -0.53
ATG2B-204ENST00000488421 PDE4AP27815 886 aa11.75□□□□□ -0.53
ATG2B-204ENST00000488421 UPF1Q92900 1129 aaKnown RBP eCLIP11.75□□□□□ -0.53
ATG2B-204ENST00000488421 GTPBP6O43824 516 aaPredicted RBP11.74□□□□□ -0.53
ATG2B-204ENST00000488421 PPP1R15BQ5SWA1 713 aa11.73□□□□□ -0.53
ATG2B-204ENST00000488421 BCL2L12Q9HB09 334 aa11.73□□□□□ -0.53
ATG2B-204ENST00000488421 BHMG1C9JSJ3 638 aaPredicted RBP11.72□□□□□ -0.53
ATG2B-204ENST00000488421 FOSBP53539 338 aa11.71□□□□□ -0.53
ATG2B-204ENST00000488421 ZNF454Q8N9F8 522 aa11.71□□□□□ -0.53
ATG2B-204ENST00000488421 SLC4A5Q9BY07 1137 aa11.71□□□□□ -0.53
ATG2B-204ENST00000488421 NCKAP5LQ9HCH0 1330 aa11.7□□□□□ -0.54
ATG2B-204ENST00000488421 PTPN5P54829 565 aa11.69□□□□□ -0.54
ATG2B-204ENST00000488421 ANO8Q9HCE9 1232 aaPredicted RBP11.68□□□□□ -0.54
ATG2B-204ENST00000488421 LARP6Q9BRS8 491 aaKnown RBP11.67□□□□□ -0.54
ATG2B-204ENST00000488421 ZBED2Q9BTP6 218 aa11.67□□□□□ -0.54
ATG2B-204ENST00000488421 THSD4Q6ZMP0 1018 aa11.66□□□□□ -0.54
ATG2B-204ENST00000488421 KCNH8Q96L42 1107 aa11.66□□□□□ -0.54
ATG2B-204ENST00000488421 STAC3Q96MF2 364 aa11.66□□□□□ -0.54
ATG2B-204ENST00000488421 DDX27Q96GQ7 796 aaKnown RBP11.65□□□□□ -0.54
ATG2B-204ENST00000488421 IFFO2Q5TF58 517 aa11.64□□□□□ -0.55
ATG2B-204ENST00000488421 ADAM33Q9BZ11 813 aa11.63□□□□□ -0.55
ATG2B-204ENST00000488421 PTPREP23469 700 aa11.61□□□□□ -0.55
ATG2B-204ENST00000488421 JPH4Q96JJ6 628 aa11.61□□□□□ -0.55
ATG2B-204ENST00000488421 EVI5O60447 810 aa11.59□□□□□ -0.55
ATG2B-204ENST00000488421 MAP3K9P80192 1104 aa11.58□□□□□ -0.56
ATG2B-204ENST00000488421 MFSD10Q14728 455 aa11.57□□□□□ -0.56
ATG2B-204ENST00000488421 WNT2BQ93097 391 aa11.57□□□□□ -0.56
ATG2B-204ENST00000488421 A0A0G2JS52 829 aa11.56□□□□□ -0.56
ATG2B-204ENST00000488421 ZDHHC16Q969W1 377 aa11.56□□□□□ -0.56
ATG2B-204ENST00000488421 RGS20O76081 388 aa11.54□□□□□ -0.56
ATG2B-204ENST00000488421 MRPL50Q8N5N7 158 aaKnown RBP11.54□□□□□ -0.56
ATG2B-204ENST00000488421 EMILIN3Q9NT22 766 aa11.54□□□□□ -0.56
ATG2B-204ENST00000488421 CADPS2Q86UW7 1296 aa11.52□□□□□ -0.57
ATG2B-204ENST00000488421 BBXQ8WY36 941 aaPredicted RBP11.51□□□□□ -0.57
ATG2B-204ENST00000488421 PCDHGA10Q9Y5H3 936 aa11.51□□□□□ -0.57
ATG2B-204ENST00000488421 COL9A1P20849 921 aa11.5□□□□□ -0.57
ATG2B-204ENST00000488421 PROX2Q3B8N5 592 aa11.5□□□□□ -0.57
ATG2B-204ENST00000488421 GOLGA8CPA6NN73 597 aa11.49□□□□□ -0.57
ATG2B-204ENST00000488421 PPP1R3GB7ZBB8 358 aa11.47□□□□□ -0.57
ATG2B-204ENST00000488421 NBPF3Q9H094 633 aa11.47□□□□□ -0.57
ATG2B-204ENST00000488421 IRX2Q9BZI1 471 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms