RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 ASXL2Q76L83 1435 aa10.46□□□□□ -0.74
PDAP1-203ENST00000488214 ARHGAP5Q13017 1502 aa10.46□□□□□ -0.74
PDAP1-203ENST00000488214 SAMD9LQ8IVG5 1584 aa10.46□□□□□ -0.74
PDAP1-203ENST00000488214 MAPKBP1O60336 1514 aa10.44□□□□□ -0.74
PDAP1-203ENST00000488214 PHF23Q9BUL5 403 aaPredicted RBP10.43□□□□□ -0.74
PDAP1-203ENST00000488214 SYCP2Q9BX26 1530 aa10.43□□□□□ -0.74
PDAP1-203ENST00000488214 DAPK1P53355 1430 aa10.41□□□□□ -0.74
PDAP1-203ENST00000488214 ARHGEF5Q12774 1597 aa10.41□□□□□ -0.74
PDAP1-203ENST00000488214 CFAP74Q9C0B2 1584 aa10.41□□□□□ -0.74
PDAP1-203ENST00000488214 CFDP1Q9UEE9 299 aaPredicted RBP10.41□□□□□ -0.74
PDAP1-203ENST00000488214 ABCC1P33527 1531 aa10.41□□□□□ -0.74
PDAP1-203ENST00000488214 ARAP3Q8WWN8 1544 aa10.41□□□□□ -0.74
PDAP1-203ENST00000488214 NPM1P06748 294 aaKnown RBP eCLIP10.4□□□□□ -0.74
PDAP1-203ENST00000488214 CYB5RLQ6IPT4 315 aa10.4□□□□□ -0.74
PDAP1-203ENST00000488214 KCNH8Q96L42 1107 aa10.4□□□□□ -0.74
PDAP1-203ENST00000488214 PTPRKQ15262 1439 aa10.4□□□□□ -0.75
PDAP1-203ENST00000488214 ZNF777Q9ULD5 760 aaPredicted RBP10.39□□□□□ -0.75
PDAP1-203ENST00000488214 DIP2BQ9P265 1576 aa10.39□□□□□ -0.75
PDAP1-203ENST00000488214 ZNF644Q9H582 1327 aaPredicted RBP10.38□□□□□ -0.75
PDAP1-203ENST00000488214 SHANK2Q9UPX8 1470 aa10.38□□□□□ -0.75
PDAP1-203ENST00000488214 MAP3K4Q9Y6R4 1608 aa10.38□□□□□ -0.75
PDAP1-203ENST00000488214 CCDC141Q6ZP82 1450 aa10.37□□□□□ -0.75
PDAP1-203ENST00000488214 PLEKHH2Q8IVE3 1493 aa10.37□□□□□ -0.75
PDAP1-203ENST00000488214 ABCC5O15440 1437 aa10.37□□□□□ -0.75
PDAP1-203ENST00000488214 PLCH2O75038 1416 aa10.37□□□□□ -0.75
PDAP1-203ENST00000488214 AKNAQ7Z591 1439 aa10.37□□□□□ -0.75
PDAP1-203ENST00000488214 HFM1A2PYH4 1435 aa10.36□□□□□ -0.75
PDAP1-203ENST00000488214 SETD5Q9C0A6 1442 aa10.36□□□□□ -0.75
PDAP1-203ENST00000488214 RAB3GAP2Q9H2M9 1393 aa10.36□□□□□ -0.75
PDAP1-203ENST00000488214 MAST1Q9Y2H9 1570 aa10.35□□□□□ -0.75
PDAP1-203ENST00000488214 KIF13AQ9H1H9 1805 aa10.35□□□□□ -0.75
PDAP1-203ENST00000488214 TSPOAP1O95153 1857 aa10.35□□□□□ -0.75
PDAP1-203ENST00000488214 KDM6BO15054 1643 aa10.35□□□□□ -0.75
PDAP1-203ENST00000488214 FANCAO15360 1455 aa10.35□□□□□ -0.75
PDAP1-203ENST00000488214 GLI2P10070 1586 aa10.35□□□□□ -0.75
PDAP1-203ENST00000488214 ADGRL2O95490 1459 aa10.34□□□□□ -0.75
PDAP1-203ENST00000488214 PLXNC1O60486 1568 aa10.34□□□□□ -0.75
PDAP1-203ENST00000488214 NAIPQ13075 1403 aa10.33□□□□□ -0.76
PDAP1-203ENST00000488214 C9orf84Q5VXU9 1444 aa10.33□□□□□ -0.76
PDAP1-203ENST00000488214 CCER1Q8TC90 406 aaPredicted RBP10.33□□□□□ -0.76
PDAP1-203ENST00000488214 MBD5Q9P267 1494 aa10.33□□□□□ -0.76
PDAP1-203ENST00000488214 ADGRL1O94910 1474 aa10.32□□□□□ -0.76
PDAP1-203ENST00000488214 ROCK1Q13464 1354 aa10.32□□□□□ -0.76
PDAP1-203ENST00000488214 CHIC2Q9UKJ5 165 aa10.32□□□□□ -0.76
PDAP1-203ENST00000488214 ARHGEF12Q9NZN5 1544 aa10.32□□□□□ -0.76
PDAP1-203ENST00000488214 PPRC1Q5VV67 1664 aaKnown RBP10.31□□□□□ -0.76
PDAP1-203ENST00000488214 INO80Q9ULG1 1556 aaPredicted RBP10.31□□□□□ -0.76
PDAP1-203ENST00000488214 ZFYVE16Q7Z3T8 1539 aa10.31□□□□□ -0.76
PDAP1-203ENST00000488214 CD109Q6YHK3 1445 aa10.31□□□□□ -0.76
PDAP1-203ENST00000488214 KIAA1107Q9UPP5 1409 aa10.31□□□□□ -0.76
PDAP1-203ENST00000488214 HRCP23327 699 aa10.3□□□□□ -0.76
PDAP1-203ENST00000488214 EFCAB2Q5VUJ9 269 aa10.29□□□□□ -0.76
PDAP1-203ENST00000488214 RRP7BPQ9NSQ0 103 aa10.29□□□□□ -0.76
PDAP1-203ENST00000488214 DHX57Q6P158 1386 aaKnown RBP10.28□□□□□ -0.76
PDAP1-203ENST00000488214 ANKRD30AQ9BXX3 1397 aa10.28□□□□□ -0.76
PDAP1-203ENST00000488214 HNRNPMP52272 730 aaKnown RBP eCLIP10.28□□□□□ -0.76
PDAP1-203ENST00000488214 ATP7AQ04656 1500 aa10.28□□□□□ -0.76
PDAP1-203ENST00000488214 RICTORQ6R327 1708 aa10.27□□□□□ -0.76
PDAP1-203ENST00000488214 TRAPPC8Q9Y2L5 1435 aa10.27□□□□□ -0.77
PDAP1-203ENST00000488214 NEO1Q92859 1461 aa10.27□□□□□ -0.77
PDAP1-203ENST00000488214 HECW2Q9P2P5 1572 aa10.26□□□□□ -0.77
PDAP1-203ENST00000488214 NCOA1Q15788 1441 aa10.26□□□□□ -0.77
PDAP1-203ENST00000488214 KDM5CP41229 1560 aa10.26□□□□□ -0.77
PDAP1-203ENST00000488214 KIF15Q9NS87 1388 aa10.26□□□□□ -0.77
PDAP1-203ENST00000488214 POGZQ7Z3K3 1410 aa10.25□□□□□ -0.77
PDAP1-203ENST00000488214 SCAPERQ9BY12 1400 aa10.25□□□□□ -0.77
PDAP1-203ENST00000488214 KIDINS220Q9ULH0 1771 aa10.25□□□□□ -0.77
PDAP1-203ENST00000488214 UNC13BO14795 1591 aa10.25□□□□□ -0.77
PDAP1-203ENST00000488214 ZNF518AQ6AHZ1 1483 aa10.24□□□□□ -0.77
PDAP1-203ENST00000488214 DUOX2Q9NRD8 1548 aa10.24□□□□□ -0.77
PDAP1-203ENST00000488214 FRMPD1Q5SYB0 1578 aa10.24□□□□□ -0.77
PDAP1-203ENST00000488214 TSPY4P0CV99 314 aa10.24□□□□□ -0.77
PDAP1-203ENST00000488214 TSPY10P0CW01 314 aa10.24□□□□□ -0.77
PDAP1-203ENST00000488214 ANKRD50Q9ULJ7 1429 aa10.24□□□□□ -0.77
PDAP1-203ENST00000488214 TEX14Q8IWB6 1497 aa10.23□□□□□ -0.77
PDAP1-203ENST00000488214 ABCA6Q8N139 1617 aa10.23□□□□□ -0.77
PDAP1-203ENST00000488214 EIF2AK4Q9P2K8 1649 aaKnown RBP10.22□□□□□ -0.77
PDAP1-203ENST00000488214 ZEB1P37275 1124 aaPredicted RBP10.22□□□□□ -0.77
PDAP1-203ENST00000488214 FAM69CQ0P6D2 419 aa10.22□□□□□ -0.77
PDAP1-203ENST00000488214 RSPH4AQ5TD94 716 aa10.22□□□□□ -0.77
PDAP1-203ENST00000488214 ERBINQ96RT1 1412 aa10.21□□□□□ -0.78
PDAP1-203ENST00000488214 DENND4BO75064 1496 aaPredicted RBP10.21□□□□□ -0.78
PDAP1-203ENST00000488214 KDM5DQ9BY66 1539 aa10.21□□□□□ -0.78
PDAP1-203ENST00000488214 RTEL1-TNFRSF6BF6WH68 1400 aa10.2□□□□□ -0.78
PDAP1-203ENST00000488214 SPAG9O60271 1321 aaKnown RBP10.2□□□□□ -0.78
PDAP1-203ENST00000488214 DEPDC5O75140 1603 aa10.2□□□□□ -0.78
PDAP1-203ENST00000488214 IQGAP3Q86VI3 1631 aa10.2□□□□□ -0.78
PDAP1-203ENST00000488214 DIP2CQ9Y2E4 1556 aa10.19□□□□□ -0.78
PDAP1-203ENST00000488214 ZMYM4Q5VZL5 1548 aa10.19□□□□□ -0.78
PDAP1-203ENST00000488214 PZPP20742 1482 aa10.18□□□□□ -0.78
PDAP1-203ENST00000488214 CLSPNQ9HAW4 1339 aa10.18□□□□□ -0.78
PDAP1-203ENST00000488214 TRIM52Q96A61 297 aa10.18□□□□□ -0.78
PDAP1-203ENST00000488214 MAGI2Q86UL8 1455 aa10.17□□□□□ -0.78
PDAP1-203ENST00000488214 AFAP1Q8N556 730 aa10.17□□□□□ -0.78
PDAP1-203ENST00000488214 RNF17Q9BXT8 1623 aaKnown RBP10.17□□□□□ -0.78
PDAP1-203ENST00000488214 FAM135AQ9P2D6 1515 aa10.17□□□□□ -0.78
PDAP1-203ENST00000488214 MLH3Q9UHC1 1453 aa10.17□□□□□ -0.78
PDAP1-203ENST00000488214 MYT1LQ9UL68 1186 aa10.16□□□□□ -0.78
PDAP1-203ENST00000488214 CEP152O94986 1710 aa10.16□□□□□ -0.78
PDAP1-203ENST00000488214 BCORL1Q5H9F3 1711 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms