RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 CADPS2Q86UW7 1296 aa11.12□□□□□ -0.63
LINC00888-204ENST00000487386 TSHZ2Q9NRE2 1034 aa11.1□□□□□ -0.63
LINC00888-204ENST00000487386 KIF3CO14782 793 aa11.09□□□□□ -0.63
LINC00888-204ENST00000487386 CRISPLD2Q9H0B8 497 aa11.07□□□□□ -0.64
LINC00888-204ENST00000487386 NCKAP5LQ9HCH0 1330 aa11.07□□□□□ -0.64
LINC00888-204ENST00000487386 SLAIN1Q8ND83 568 aa11.06□□□□□ -0.64
LINC00888-204ENST00000487386 GPHNQ9NQX3 736 aaPredicted RBP11.05□□□□□ -0.64
LINC00888-204ENST00000487386 C2orf72A6NCS6 295 aa11.04□□□□□ -0.64
LINC00888-204ENST00000487386 PDE4AP27815 886 aa11.02□□□□□ -0.65
LINC00888-204ENST00000487386 TMC2Q8TDI7 906 aa11.02□□□□□ -0.65
LINC00888-204ENST00000487386 HAP1P54257 671 aaPredicted RBP11.01□□□□□ -0.65
LINC00888-204ENST00000487386 FOXK1P85037 733 aa10.99□□□□□ -0.65
LINC00888-204ENST00000487386 MFSD10Q14728 455 aa10.99□□□□□ -0.65
LINC00888-204ENST00000487386 DSG2Q14126 1118 aa10.97□□□□□ -0.65
LINC00888-204ENST00000487386 LARP6Q9BRS8 491 aaKnown RBP10.97□□□□□ -0.65
LINC00888-204ENST00000487386 PPP1R15BQ5SWA1 713 aa10.93□□□□□ -0.66
LINC00888-204ENST00000487386 PLPP6Q8IY26 295 aa10.93□□□□□ -0.66
LINC00888-204ENST00000487386 DDX27Q96GQ7 796 aaKnown RBP10.93□□□□□ -0.66
LINC00888-204ENST00000487386 HOXB3P14651 431 aaPredicted RBP10.92□□□□□ -0.66
LINC00888-204ENST00000487386 KDM2AQ9Y2K7 1162 aa10.91□□□□□ -0.66
LINC00888-204ENST00000487386 VSIG10Q8N0Z9 540 aa10.9□□□□□ -0.66
LINC00888-204ENST00000487386 SNPHO15079 494 aa10.89□□□□□ -0.67
LINC00888-204ENST00000487386 SLC34A2O95436 690 aa10.88□□□□□ -0.67
LINC00888-204ENST00000487386 CAMK2BQ13554 666 aa10.87□□□□□ -0.67
LINC00888-204ENST00000487386 DOK7Q18PE1 504 aa10.86□□□□□ -0.67
LINC00888-204ENST00000487386 WDR70Q9NW82 654 aa10.86□□□□□ -0.67
LINC00888-204ENST00000487386 POTEMA6NI47 508 aa10.83□□□□□ -0.68
LINC00888-204ENST00000487386 PTCD2Q8WV60 388 aaKnown RBP10.83□□□□□ -0.68
LINC00888-204ENST00000487386 EMILIN3Q9NT22 766 aa10.82□□□□□ -0.68
LINC00888-204ENST00000487386 SLC24A1O60721 1099 aa10.81□□□□□ -0.68
LINC00888-204ENST00000487386 E2F4Q16254 413 aa10.81□□□□□ -0.68
LINC00888-204ENST00000487386 OXER1Q8TDS5 423 aa10.81□□□□□ -0.68
LINC00888-204ENST00000487386 ZSWIM6Q9HCJ5 1215 aa10.81□□□□□ -0.68
LINC00888-204ENST00000487386 LCE2DQ5TA82 110 aaPredicted RBP10.8□□□□□ -0.68
LINC00888-204ENST00000487386 ST18O60284 1047 aa10.79□□□□□ -0.68
LINC00888-204ENST00000487386 GPR153Q6NV75 609 aa10.79□□□□□ -0.68
LINC00888-204ENST00000487386 RIMBP2O15034 1052 aa10.78□□□□□ -0.68
LINC00888-204ENST00000487386 ZNF710Q8N1W2 664 aa10.78□□□□□ -0.68
LINC00888-204ENST00000487386 FAM163AQ96GL9 167 aaPredicted RBP10.78□□□□□ -0.68
LINC00888-204ENST00000487386 PCDHGA4Q9Y5G9 962 aa10.78□□□□□ -0.68
LINC00888-204ENST00000487386 ARIH1Q9Y4X5 557 aaPredicted RBP10.77□□□□□ -0.69
LINC00888-204ENST00000487386 HOXB1P14653 301 aaPredicted RBP10.76□□□□□ -0.69
LINC00888-204ENST00000487386 KDM4FA0A1W2PPD8 638 aa10.75□□□□□ -0.69
LINC00888-204ENST00000487386 ARSIQ5FYB1 569 aa10.75□□□□□ -0.69
LINC00888-204ENST00000487386 POTEGQ6S5H5 508 aa10.75□□□□□ -0.69
LINC00888-204ENST00000487386 UPF1Q92900 1129 aaKnown RBP eCLIP10.74□□□□□ -0.692e-7■■■■□ 22.2
LINC00888-204ENST00000487386 TBC1D12O60347 775 aa10.73□□□□□ -0.69
LINC00888-204ENST00000487386 KCNV2Q8TDN2 545 aa10.73□□□□□ -0.69
LINC00888-204ENST00000487386 KHSRPQ92945 711 aaKnown RBP eCLIP10.72□□□□□ -0.69
LINC00888-204ENST00000487386 MAP3K9P80192 1104 aa10.7□□□□□ -0.7
LINC00888-204ENST00000487386 P3H3Q8IVL6 736 aa10.7□□□□□ -0.7
LINC00888-204ENST00000487386 ARHGEF1Q92888 912 aaKnown RBP10.7□□□□□ -0.7
LINC00888-204ENST00000487386 DPYSL4O14531 572 aa10.69□□□□□ -0.7
LINC00888-204ENST00000487386 ANO8Q9HCE9 1232 aaPredicted RBP10.68□□□□□ -0.7
LINC00888-204ENST00000487386 NUDT7P0C024 238 aa10.67□□□□□ -0.7
LINC00888-204ENST00000487386 EVI5O60447 810 aa10.66□□□□□ -0.7
LINC00888-204ENST00000487386 PCDH10Q9P2E7 1040 aa10.66□□□□□ -0.7
LINC00888-204ENST00000487386 PDIA6Q15084 440 aa10.65□□□□□ -0.7
LINC00888-204ENST00000487386 MARVELD3Q96A59 401 aa10.65□□□□□ -0.7
LINC00888-204ENST00000487386 SPDYE16A6NNV3 312 aaPredicted RBP10.64□□□□□ -0.71
LINC00888-204ENST00000487386 EMP3P54852 163 aa10.62□□□□□ -0.71
LINC00888-204ENST00000487386 LHX6Q9UPM6 363 aa10.62□□□□□ -0.71
LINC00888-204ENST00000487386 ZNF316A6NFI3 1004 aaPredicted RBP10.61□□□□□ -0.71
LINC00888-204ENST00000487386 PTGER2P43116 358 aa10.61□□□□□ -0.71
LINC00888-204ENST00000487386 POTEB3A0JP26 581 aa10.58□□□□□ -0.72
LINC00888-204ENST00000487386 POTEBQ6S5H4 581 aa10.58□□□□□ -0.72
LINC00888-204ENST00000487386 ERBB3P21860 1342 aa10.58□□□□□ -0.72
LINC00888-204ENST00000487386 FAM205CA6NFA0 338 aa10.56□□□□□ -0.72
LINC00888-204ENST00000487386 FOSBP53539 338 aa10.55□□□□□ -0.72
LINC00888-204ENST00000487386 VARS2Q5ST30 1063 aaKnown RBP10.55□□□□□ -0.72
LINC00888-204ENST00000487386 HS3ST6Q96QI5 342 aa10.55□□□□□ -0.72
LINC00888-204ENST00000487386 PSDA5PKW4 1024 aaPredicted RBP10.54□□□□□ -0.72
LINC00888-204ENST00000487386 JPH4Q96JJ6 628 aa10.54□□□□□ -0.72
LINC00888-204ENST00000487386 SEMA3EO15041 775 aa10.52□□□□□ -0.73
LINC00888-204ENST00000487386 PHF14O94880 888 aa10.52□□□□□ -0.73
LINC00888-204ENST00000487386 PCDHGA10Q9Y5H3 936 aa10.52□□□□□ -0.73
LINC00888-204ENST00000487386 DDX12PQ92771 950 aa10.51□□□□□ -0.73
LINC00888-204ENST00000487386 TESPA1A2RU30 521 aaPredicted RBP10.5□□□□□ -0.73
LINC00888-204ENST00000487386 MLLT3P42568 568 aaPredicted RBP10.5□□□□□ -0.73
LINC00888-204ENST00000487386 ZNF687Q8N1G0 1237 aa10.5□□□□□ -0.73
LINC00888-204ENST00000487386 ZNF454Q8N9F8 522 aa10.5□□□□□ -0.73
LINC00888-204ENST00000487386 PPP4R3BQ5MIZ7 849 aa10.49□□□□□ -0.73
LINC00888-204ENST00000487386 EPAS1Q99814 870 aa10.49□□□□□ -0.73
LINC00888-204ENST00000487386 OSBPP22059 807 aa10.47□□□□□ -0.73
LINC00888-204ENST00000487386 ZDHHC16Q969W1 377 aa10.47□□□□□ -0.73
LINC00888-204ENST00000487386 GRXCR2A6NFK2 248 aa10.46□□□□□ -0.73
LINC00888-204ENST00000487386 TYW1BQ6NUM6 668 aa10.46□□□□□ -0.73
LINC00888-204ENST00000487386 FBXW7Q969H0 707 aa10.46□□□□□ -0.73
LINC00888-204ENST00000487386 PRIM1P49642 420 aaKnown RBP10.45□□□□□ -0.74
LINC00888-204ENST00000487386 POTEEQ6S8J3 1075 aa10.45□□□□□ -0.74
LINC00888-204ENST00000487386 ADAM33Q9BZ11 813 aa10.45□□□□□ -0.74
LINC00888-204ENST00000487386 BCL2L12Q9HB09 334 aa10.44□□□□□ -0.74
LINC00888-204ENST00000487386 NBR1Q14596 966 aa10.43□□□□□ -0.74
LINC00888-204ENST00000487386 EN1Q05925 392 aaPredicted RBP10.42□□□□□ -0.74
LINC00888-204ENST00000487386 CDAN1Q8IWY9 1227 aa10.42□□□□□ -0.74
LINC00888-204ENST00000487386 PBX2P40425 430 aa10.41□□□□□ -0.74
LINC00888-204ENST00000487386 ARHGAP33O14559 1287 aa10.39□□□□□ -0.75
LINC00888-204ENST00000487386 SMYD5Q6GMV2 418 aa10.39□□□□□ -0.75
LINC00888-204ENST00000487386 KRTAP3-3Q9BYR6 98 aa10.39□□□□□ -0.75
LINC00888-204ENST00000487386 KRTAP3-2Q9BYR7 98 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms