RNA–Protein interactions for RNA: ENST00000487034.5

RPL13-208, Transcript of ribosomal protein L13, humanhuman

TSL 1 (best)

Gene RPL13, Length 615 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13-208ENST00000487034 CDK11AQ9UQ88 783 aaPredicted RBP36.39■■■■□ 3.42
RPL13-208ENST00000487034 HECW2Q9P2P5 1572 aa36.39■■■■□ 3.42
RPL13-208ENST00000487034 YEATS2Q9ULM3 1422 aa36.37■■■■□ 3.41
RPL13-208ENST00000487034 ZFYVE16Q7Z3T8 1539 aa36.37■■■■□ 3.41
RPL13-208ENST00000487034 SCAPERQ9BY12 1400 aa36.36■■■■□ 3.41
RPL13-208ENST00000487034 CDC42BPBQ9Y5S2 1711 aa36.34■■■■□ 3.41
RPL13-208ENST00000487034 MAGI2Q86UL8 1455 aa36.33■■■■□ 3.41
RPL13-208ENST00000487034 PREX2Q70Z35 1606 aa36.33■■■■□ 3.41
RPL13-208ENST00000487034 MADDQ8WXG6 1647 aa36.33■■■■□ 3.41
RPL13-208ENST00000487034 ARHGAP5Q13017 1502 aa36.3■■■■□ 3.4
RPL13-208ENST00000487034 PTPRMP28827 1452 aa36.29■■■■□ 3.4
RPL13-208ENST00000487034 KDM5CP41229 1560 aa36.27■■■■□ 3.4
RPL13-208ENST00000487034 EFCAB2Q5VUJ9 269 aa36.25■■■■□ 3.39
RPL13-208ENST00000487034 CDC42BPAQ5VT25 1732 aa36.24■■■■□ 3.39
RPL13-208ENST00000487034 ABCC1P33527 1531 aa36.21■■■■□ 3.39
RPL13-208ENST00000487034 ZNF518AQ6AHZ1 1483 aa36.2■■■■□ 3.39
RPL13-208ENST00000487034 ARHGEF12Q9NZN5 1544 aa36.17■■■■□ 3.38
RPL13-208ENST00000487034 RIMS1Q86UR5 1692 aaKnown RBP36.16■■■■□ 3.38
RPL13-208ENST00000487034 ITSN2Q9NZM3 1697 aa36.15■■■■□ 3.38
RPL13-208ENST00000487034 CEP162Q5TB80 1403 aa36.15■■■■□ 3.38
RPL13-208ENST00000487034 ARID4BQ4LE39 1312 aaPredicted RBP36.14■■■■□ 3.38
RPL13-208ENST00000487034 ATP10AO60312 1499 aa36.11■■■■□ 3.37
RPL13-208ENST00000487034 C9orf84Q5VXU9 1444 aa36.1■■■■□ 3.37
RPL13-208ENST00000487034 DIP2CQ9Y2E4 1556 aa36.1■■■■□ 3.37
RPL13-208ENST00000487034 ABCA6Q8N139 1617 aa36.08■■■■□ 3.37
RPL13-208ENST00000487034 TRAPPC8Q9Y2L5 1435 aa36.07■■■■□ 3.36
RPL13-208ENST00000487034 SAMD9LQ8IVG5 1584 aa36.06■■■■□ 3.36
RPL13-208ENST00000487034 GPATCH8Q9UKJ3 1502 aaKnown RBP36.06■■■■□ 3.36
RPL13-208ENST00000487034 AFAP1Q8N556 730 aa36.05■■■■□ 3.36
RPL13-208ENST00000487034 REREQ9P2R6 1566 aa36.04■■■■□ 3.36
RPL13-208ENST00000487034 FER1L4A9Z1Z3 1794 aa36.04■■■■□ 3.36
RPL13-208ENST00000487034 MLH3Q9UHC1 1453 aa36.04■■■■□ 3.36
RPL13-208ENST00000487034 LOC105371045A0A1W2PR82 267 aa36■■■■□ 3.35
RPL13-208ENST00000487034 KIDINS220Q9ULH0 1771 aa35.98■■■■□ 3.35
RPL13-208ENST00000487034 LMTK3Q96Q04 1460 aa35.98■■■■□ 3.35
RPL13-208ENST00000487034 SYCP2Q9BX26 1530 aa35.97■■■■□ 3.35
RPL13-208ENST00000487034 EHBP1L1Q8N3D4 1523 aa35.96■■■■□ 3.35
RPL13-208ENST00000487034 TIAM1Q13009 1591 aa35.93■■■■□ 3.34
RPL13-208ENST00000487034 MTUS2Q5JR59 1369 aa35.9■■■■□ 3.34
RPL13-208ENST00000487034 AGLP35573 1532 aa35.88■■■■□ 3.33
RPL13-208ENST00000487034 MLECQ14165 292 aa35.87■■■■□ 3.33
RPL13-208ENST00000487034 KIAA1107Q9UPP5 1409 aa35.83■■■■□ 3.33
RPL13-208ENST00000487034 CCNB3Q8WWL7 1395 aa35.83■■■■□ 3.33
RPL13-208ENST00000487034 INO80Q9ULG1 1556 aaPredicted RBP35.83■■■■□ 3.33
RPL13-208ENST00000487034 PLEKHH2Q8IVE3 1493 aa35.8■■■■□ 3.32
RPL13-208ENST00000487034 ZNF777Q9ULD5 760 aaPredicted RBP35.77■■■■□ 3.32
RPL13-208ENST00000487034 VPS8Q8N3P4 1428 aa35.76■■■■□ 3.32
RPL13-208ENST00000487034 ATP7AQ04656 1500 aa35.76■■■■□ 3.31
RPL13-208ENST00000487034 CFDP1Q9UEE9 299 aaPredicted RBP35.75■■■■□ 3.31
RPL13-208ENST00000487034 PLXNC1O60486 1568 aa35.73■■■■□ 3.31
RPL13-208ENST00000487034 HNRNPMP52272 730 aaKnown RBP eCLIP35.72■■■■□ 3.31
RPL13-208ENST00000487034 MBD5Q9P267 1494 aa35.72■■■■□ 3.31
RPL13-208ENST00000487034 SUPT6HQ7KZ85 1726 aaKnown RBP35.71■■■■□ 3.31
RPL13-208ENST00000487034 NCOA2Q15596 1464 aa35.71■■■■□ 3.31
RPL13-208ENST00000487034 MYT1LQ9UL68 1186 aa35.7■■■■□ 3.31
RPL13-208ENST00000487034 ZNF644Q9H582 1327 aaPredicted RBP35.68■■■■□ 3.3
RPL13-208ENST00000487034 PREX1Q8TCU6 1659 aa35.68■■■■□ 3.3
RPL13-208ENST00000487034 PLPPR3Q6T4P5 718 aa35.67■■■■□ 3.3
RPL13-208ENST00000487034 C3P01024 1663 aa35.67■■■■□ 3.3
RPL13-208ENST00000487034 SPAG9O60271 1321 aaKnown RBP35.66■■■■□ 3.3
RPL13-208ENST00000487034 CEBPAP49715 358 aaPredicted RBP35.62■■■■□ 3.29
RPL13-208ENST00000487034 LRRC9Q6ZRR7 1453 aa35.6■■■■□ 3.29
RPL13-208ENST00000487034 HSPA2P54652 639 aa35.6■■■■□ 3.29
RPL13-208ENST00000487034 A2MP01023 1474 aa35.58■■■■□ 3.29
RPL13-208ENST00000487034 CAMSAP2Q08AD1 1489 aa35.58■■■■□ 3.29
RPL13-208ENST00000487034 MAP3K1Q13233 1512 aa35.57■■■■□ 3.29
RPL13-208ENST00000487034 ADGBQ8N7X0 1667 aa35.57■■■■□ 3.28
RPL13-208ENST00000487034 ILDR1Q86SU0 546 aaPredicted RBP35.57■■■■□ 3.28
RPL13-208ENST00000487034 MROH2AA6NES4 1674 aa35.56■■■■□ 3.28
RPL13-208ENST00000487034 CNTLNQ9NXG0 1405 aa35.52■■■■□ 3.28
RPL13-208ENST00000487034 RTEL1-TNFRSF6BF6WH68 1400 aa35.5■■■■□ 3.27
RPL13-208ENST00000487034 CCDC141Q6ZP82 1450 aa35.5■■■■□ 3.27
RPL13-208ENST00000487034 SETD1BQ9UPS6 1966 aaKnown RBP35.47■■■■□ 3.27
RPL13-208ENST00000487034 ARHGEF5Q12774 1597 aa35.47■■■■□ 3.27
RPL13-208ENST00000487034 UHRF1BP1Q6BDS2 1440 aa35.45■■■■□ 3.27
RPL13-208ENST00000487034 CLTCQ00610 1675 aaKnown RBP35.44■■■■□ 3.26
RPL13-208ENST00000487034 KANK4Q5T7N3 995 aaPredicted RBP35.43■■■■□ 3.26
RPL13-208ENST00000487034 STRCQ7RTU9 1775 aa35.43■■■■□ 3.26
RPL13-208ENST00000487034 NPATQ14207 1427 aa35.37■■■■□ 3.25
RPL13-208ENST00000487034 ZMYM3Q14202 1370 aa35.34■■■■□ 3.25
RPL13-208ENST00000487034 DHX29Q7Z478 1369 aaKnown RBP35.34■■■■□ 3.25
RPL13-208ENST00000487034 ESF1Q9H501 851 aaKnown RBP35.33■■■■□ 3.25
RPL13-208ENST00000487034 MYOM3Q5VTT5 1437 aa35.32■■■■□ 3.25
RPL13-208ENST00000487034 MAST1Q9Y2H9 1570 aa35.32■■■■□ 3.24
RPL13-208ENST00000487034 MIA2Q96PC5 1412 aa35.29■■■■□ 3.24
RPL13-208ENST00000487034 MYO3AQ8NEV4 1616 aa35.28■■■■□ 3.24
RPL13-208ENST00000487034 PTPRKQ15262 1439 aa35.27■■■■□ 3.24
RPL13-208ENST00000487034 ZNF142P52746 1687 aaPredicted RBP35.27■■■■□ 3.24
RPL13-208ENST00000487034 RSPH4AQ5TD94 716 aa35.26■■■■□ 3.24
RPL13-208ENST00000487034 GGT6Q6P531 493 aa35.24■■■■□ 3.23
RPL13-208ENST00000487034 FAM135AQ9P2D6 1515 aa35.22■■■■□ 3.23
RPL13-208ENST00000487034 PPP6R1Q9UPN7 881 aa35.2■■■■□ 3.23
RPL13-208ENST00000487034 NCOA1Q15788 1441 aa35.2■■■■□ 3.23
RPL13-208ENST00000487034 KDM5DQ9BY66 1539 aa35.19■■■■□ 3.22
RPL13-208ENST00000487034 RNF17Q9BXT8 1623 aaKnown RBP35.18■■■■□ 3.22
RPL13-208ENST00000487034 FBXO41Q8TF61 875 aa35.18■■■■□ 3.22
RPL13-208ENST00000487034 CROCC2H7BZ55 1655 aa35.17■■■■□ 3.22
RPL13-208ENST00000487034 CEP170BQ9Y4F5 1589 aaPredicted RBP35.16■■■■□ 3.22
RPL13-208ENST00000487034 CAMSAP1Q5T5Y3 1602 aa35.14■■■■□ 3.22
RPL13-208ENST00000487034 PTPN23Q9H3S7 1636 aa35.14■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms