RNA–Protein interactions for RNA: ENST00000486964.5

POLR1A-208, Transcript of RNA polymerase I subunit A, humanhuman

TSL 5

Gene POLR1A, Length 1,427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-208ENST00000486964 CFDP1Q9UEE9 299 aaPredicted RBP14.19□□□□□ -0.14
POLR1A-208ENST00000486964 ZNF644Q9H582 1327 aaPredicted RBP14.19□□□□□ -0.14
POLR1A-208ENST00000486964 SETD5Q9C0A6 1442 aa14.19□□□□□ -0.14
POLR1A-208ENST00000486964 ZCCHC11Q5TAX3 1644 aaKnown RBP14.18□□□□□ -0.14
POLR1A-208ENST00000486964 ABCC5O15440 1437 aa14.15□□□□□ -0.14
POLR1A-208ENST00000486964 HFM1A2PYH4 1435 aa14.15□□□□□ -0.14
POLR1A-208ENST00000486964 CENPBP07199 599 aaPredicted RBP14.15□□□□□ -0.14
POLR1A-208ENST00000486964 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.15□□□□□ -0.14
POLR1A-208ENST00000486964 RAB3GAP2Q9H2M9 1393 aa14.15□□□□□ -0.14
POLR1A-208ENST00000486964 DAPK1P53355 1430 aa14.13□□□□□ -0.15
POLR1A-208ENST00000486964 AKNAQ7Z591 1439 aa14.13□□□□□ -0.15
POLR1A-208ENST00000486964 ROCK1Q13464 1354 aa14.13□□□□□ -0.15
POLR1A-208ENST00000486964 DHX57Q6P158 1386 aaKnown RBP14.13□□□□□ -0.15
POLR1A-208ENST00000486964 CAMSAP2Q08AD1 1489 aa14.12□□□□□ -0.15
POLR1A-208ENST00000486964 NAIPQ13075 1403 aa14.12□□□□□ -0.15
POLR1A-208ENST00000486964 DIEXFQ68CQ4 756 aaKnown RBP14.12□□□□□ -0.15
POLR1A-208ENST00000486964 KCNH8Q96L42 1107 aa14.12□□□□□ -0.15
POLR1A-208ENST00000486964 WDR7Q9Y4E6 1490 aa14.11□□□□□ -0.15
POLR1A-208ENST00000486964 PLCH2O75038 1416 aa14.11□□□□□ -0.15
POLR1A-208ENST00000486964 ITSN2Q9NZM3 1697 aa14.11□□□□□ -0.15
POLR1A-208ENST00000486964 CLSPNQ9HAW4 1339 aa14.11□□□□□ -0.15
POLR1A-208ENST00000486964 SCAF1Q9H7N4 1312 aaKnown RBP14.1□□□□□ -0.15
POLR1A-208ENST00000486964 CDC42BPAQ5VT25 1732 aa14.1□□□□□ -0.15
POLR1A-208ENST00000486964 MBD5Q9P267 1494 aa14.1□□□□□ -0.15
POLR1A-208ENST00000486964 ASXL2Q76L83 1435 aa14.1□□□□□ -0.15
POLR1A-208ENST00000486964 NPM1P06748 294 aaKnown RBP eCLIP14.09□□□□□ -0.15
POLR1A-208ENST00000486964 RSPH4AQ5TD94 716 aa14.09□□□□□ -0.15
POLR1A-208ENST00000486964 DNMT1P26358 1616 aaKnown RBP14.09□□□□□ -0.15
POLR1A-208ENST00000486964 TTC37Q6PGP7 1564 aa14.08□□□□□ -0.16
POLR1A-208ENST00000486964 ACIN1Q9UKV3 1341 aaKnown RBP14.08□□□□□ -0.16
POLR1A-208ENST00000486964 ZNF777Q9ULD5 760 aaPredicted RBP14.07□□□□□ -0.16
POLR1A-208ENST00000486964 KIAA1107Q9UPP5 1409 aa14.07□□□□□ -0.16
POLR1A-208ENST00000486964 ARAP3Q8WWN8 1544 aa14.07□□□□□ -0.16
POLR1A-208ENST00000486964 CHIC2Q9UKJ5 165 aa14.07□□□□□ -0.16
POLR1A-208ENST00000486964 PREX2Q70Z35 1606 aa14.06□□□□□ -0.16
POLR1A-208ENST00000486964 NCOA1Q15788 1441 aa14.06□□□□□ -0.16
POLR1A-208ENST00000486964 EFCAB2Q5VUJ9 269 aa14.06□□□□□ -0.16
POLR1A-208ENST00000486964 CDC42BPBQ9Y5S2 1711 aa14.05□□□□□ -0.16
POLR1A-208ENST00000486964 ADGRL2O95490 1459 aa14.05□□□□□ -0.16
POLR1A-208ENST00000486964 ZNF316A6NFI3 1004 aaPredicted RBP14.05□□□□□ -0.16
POLR1A-208ENST00000486964 HNRNPMP52272 730 aaKnown RBP eCLIP14.05□□□□□ -0.16
POLR1A-208ENST00000486964 RRP7BPQ9NSQ0 103 aa14.05□□□□□ -0.16
POLR1A-208ENST00000486964 ARHGEF5Q12774 1597 aa14.04□□□□□ -0.16
POLR1A-208ENST00000486964 SAMD9LQ8IVG5 1584 aa14.04□□□□□ -0.16
POLR1A-208ENST00000486964 PLEKHH2Q8IVE3 1493 aa14.03□□□□□ -0.16
POLR1A-208ENST00000486964 SHANK2Q9UPX8 1470 aa14.03□□□□□ -0.16
POLR1A-208ENST00000486964 ABCA9Q8IUA7 1624 aa14.03□□□□□ -0.16
POLR1A-208ENST00000486964 MAPKBP1O60336 1514 aa14□□□□□ -0.17
POLR1A-208ENST00000486964 ARHGAP5Q13017 1502 aa14□□□□□ -0.17
POLR1A-208ENST00000486964 ARHGEF12Q9NZN5 1544 aa14□□□□□ -0.17
POLR1A-208ENST00000486964 TSPY4P0CV99 314 aa13.99□□□□□ -0.17
POLR1A-208ENST00000486964 TSPY10P0CW01 314 aa13.99□□□□□ -0.17
POLR1A-208ENST00000486964 ANKRD30AQ9BXX3 1397 aa13.99□□□□□ -0.17
POLR1A-208ENST00000486964 MYO5CQ9NQX4 1742 aa13.99□□□□□ -0.17
POLR1A-208ENST00000486964 CCDC141Q6ZP82 1450 aa13.98□□□□□ -0.17
POLR1A-208ENST00000486964 DIP2BQ9P265 1576 aa13.98□□□□□ -0.17
POLR1A-208ENST00000486964 C9orf84Q5VXU9 1444 aa13.98□□□□□ -0.17
POLR1A-208ENST00000486964 GCC2Q8IWJ2 1684 aa13.97□□□□□ -0.17
POLR1A-208ENST00000486964 KDM6BO15054 1643 aa13.96□□□□□ -0.18
POLR1A-208ENST00000486964 CROCC2H7BZ55 1655 aa13.96□□□□□ -0.18
POLR1A-208ENST00000486964 MAST1Q9Y2H9 1570 aa13.95□□□□□ -0.18
POLR1A-208ENST00000486964 ABCC1P33527 1531 aa13.94□□□□□ -0.18
POLR1A-208ENST00000486964 SYCP2Q9BX26 1530 aa13.94□□□□□ -0.18
POLR1A-208ENST00000486964 TSPOAP1O95153 1857 aa13.94□□□□□ -0.18
POLR1A-208ENST00000486964 CD109Q6YHK3 1445 aa13.94□□□□□ -0.18
POLR1A-208ENST00000486964 TRAPPC8Q9Y2L5 1435 aa13.94□□□□□ -0.18
POLR1A-208ENST00000486964 FANCAO15360 1455 aa13.94□□□□□ -0.18
POLR1A-208ENST00000486964 DENND4BO75064 1496 aaPredicted RBP13.93□□□□□ -0.18
POLR1A-208ENST00000486964 RTEL1-TNFRSF6BF6WH68 1400 aa13.92□□□□□ -0.18
POLR1A-208ENST00000486964 GLI2P10070 1586 aa13.92□□□□□ -0.18
POLR1A-208ENST00000486964 ANKRD50Q9ULJ7 1429 aa13.91□□□□□ -0.18
POLR1A-208ENST00000486964 FAM69CQ0P6D2 419 aa13.91□□□□□ -0.18
POLR1A-208ENST00000486964 NEUROD1Q13562 356 aa13.91□□□□□ -0.18
POLR1A-208ENST00000486964 ADGBQ8N7X0 1667 aa13.91□□□□□ -0.18
POLR1A-208ENST00000486964 MPHOSPH9Q99550 1183 aa13.9□□□□□ -0.18
POLR1A-208ENST00000486964 KIF15Q9NS87 1388 aa13.9□□□□□ -0.18
POLR1A-208ENST00000486964 AFAP1Q8N556 730 aa13.9□□□□□ -0.19
POLR1A-208ENST00000486964 SCAPERQ9BY12 1400 aa13.89□□□□□ -0.19
POLR1A-208ENST00000486964 TIMELESSQ9UNS1 1208 aa13.89□□□□□ -0.19
POLR1A-208ENST00000486964 KDM4FA0A1W2PPD8 638 aa13.87□□□□□ -0.19
POLR1A-208ENST00000486964 TRIM52Q96A61 297 aa13.87□□□□□ -0.19
POLR1A-208ENST00000486964 ADGRL1O94910 1474 aa13.87□□□□□ -0.19
POLR1A-208ENST00000486964 NEO1Q92859 1461 aa13.87□□□□□ -0.19
POLR1A-208ENST00000486964 SPAG9O60271 1321 aaKnown RBP13.86□□□□□ -0.19
POLR1A-208ENST00000486964 PZPP20742 1482 aa13.86□□□□□ -0.19
POLR1A-208ENST00000486964 PLXNC1O60486 1568 aa13.86□□□□□ -0.19
POLR1A-208ENST00000486964 SIN3AQ96ST3 1273 aa13.85□□□□□ -0.19
POLR1A-208ENST00000486964 KDM5DQ9BY66 1539 aa13.83□□□□□ -0.2
POLR1A-208ENST00000486964 ANKRD30BQ9BXX2 1392 aa13.83□□□□□ -0.2
POLR1A-208ENST00000486964 MAP3K4Q9Y6R4 1608 aa13.83□□□□□ -0.2
POLR1A-208ENST00000486964 DUOX2Q9NRD8 1548 aa13.82□□□□□ -0.2
POLR1A-208ENST00000486964 GTF3C3Q9Y5Q9 886 aa13.81□□□□□ -0.2
POLR1A-208ENST00000486964 PPRC1Q5VV67 1664 aaKnown RBP13.81□□□□□ -0.2
POLR1A-208ENST00000486964 POGZQ7Z3K3 1410 aa13.81□□□□□ -0.2
POLR1A-208ENST00000486964 ERBINQ96RT1 1412 aa13.81□□□□□ -0.2
POLR1A-208ENST00000486964 SLC4A1APQ9BWU0 796 aaKnown RBP13.81□□□□□ -0.2
POLR1A-208ENST00000486964 NUP155O75694 1391 aa13.81□□□□□ -0.2
POLR1A-208ENST00000486964 ZNF518AQ6AHZ1 1483 aa13.81□□□□□ -0.2
POLR1A-208ENST00000486964 CFAP74Q9C0B2 1584 aa13.81□□□□□ -0.2
POLR1A-208ENST00000486964 ZFYVE16Q7Z3T8 1539 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms