RNA–Protein interactions for RNA: ENST00000486934.1

TRA2A-207, Transcript of transformer 2 alpha homolog, humanhuman

TSL 2

Gene TRA2A, Length 417 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-207ENST00000486934 STK25O00506 426 aa14.46□□□□□ -0.09
TRA2A-207ENST00000486934 CHGAP10645 457 aaKnown RBP14.45□□□□□ -0.1
TRA2A-207ENST00000486934 HS6ST3Q8IZP7 471 aa14.45□□□□□ -0.1
TRA2A-207ENST00000486934 STK24Q9Y6E0 443 aa14.43□□□□□ -0.1
TRA2A-207ENST00000486934 RIMBP2O15034 1052 aa14.42□□□□□ -0.1
TRA2A-207ENST00000486934 NKX1-1Q15270 411 aaPredicted RBP14.39□□□□□ -0.11
TRA2A-207ENST00000486934 MICALL2Q8IY33 904 aa14.39□□□□□ -0.11
TRA2A-207ENST00000486934 TMEM92Q6UXU6 159 aa14.38□□□□□ -0.11
TRA2A-207ENST00000486934 VARS2Q5ST30 1063 aaKnown RBP14.37□□□□□ -0.11
TRA2A-207ENST00000486934 TAOK2Q9UL54 1235 aa14.37□□□□□ -0.11
TRA2A-207ENST00000486934 SOX12O15370 315 aa14.34□□□□□ -0.11
TRA2A-207ENST00000486934 DNAJC5Q9H3Z4 198 aa14.33□□□□□ -0.12
TRA2A-207ENST00000486934 MS4A4AQ96JQ5 239 aa14.31□□□□□ -0.12
TRA2A-207ENST00000486934 MFRPQ9BY79 579 aa14.3□□□□□ -0.12
TRA2A-207ENST00000486934 ZSWIM6Q9HCJ5 1215 aa14.3□□□□□ -0.12
TRA2A-207ENST00000486934 PHF8Q9UPP1 1060 aa14.29□□□□□ -0.12
TRA2A-207ENST00000486934 RNF166Q96A37 237 aaPredicted RBP14.28□□□□□ -0.12
TRA2A-207ENST00000486934 GPR153Q6NV75 609 aa14.27□□□□□ -0.13
TRA2A-207ENST00000486934 FBXO22Q8NEZ5 403 aa14.26□□□□□ -0.13
TRA2A-207ENST00000486934 ZNF687Q8N1G0 1237 aa14.25□□□□□ -0.13
TRA2A-207ENST00000486934 MYT1LQ9UL68 1186 aa14.22□□□□□ -0.13
TRA2A-207ENST00000486934 BBXQ8WY36 941 aaPredicted RBP14.2□□□□□ -0.14
TRA2A-207ENST00000486934 GTPBP6O43824 516 aaPredicted RBP14.19□□□□□ -0.14
TRA2A-207ENST00000486934 ARSIQ5FYB1 569 aa14.19□□□□□ -0.14
TRA2A-207ENST00000486934 PPP1R37O75864 691 aa14.16□□□□□ -0.14
TRA2A-207ENST00000486934 NLRP6P59044 892 aa14.14□□□□□ -0.15
TRA2A-207ENST00000486934 KHSRPQ92945 711 aaKnown RBP eCLIP14.13□□□□□ -0.154e-13■■■□□ 15.6
TRA2A-207ENST00000486934 ANKRD13DQ6ZTN6 518 aa14.11□□□□□ -0.15
TRA2A-207ENST00000486934 ZNF316A6NFI3 1004 aaPredicted RBP14.09□□□□□ -0.15
TRA2A-207ENST00000486934 PTGER2P43116 358 aa14.08□□□□□ -0.16
TRA2A-207ENST00000486934 PAXIP1Q6ZW49 1069 aaPredicted RBP14.03□□□□□ -0.16
TRA2A-207ENST00000486934 LSM11P83369 360 aaKnown RBP eCLIP14.01□□□□□ -0.17
TRA2A-207ENST00000486934 C2orf72A6NCS6 295 aa14□□□□□ -0.17
TRA2A-207ENST00000486934 CFAP44Q96MT7 982 aa14□□□□□ -0.17
TRA2A-207ENST00000486934 KIF3CO14782 793 aa13.99□□□□□ -0.17
TRA2A-207ENST00000486934 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.99□□□□□ -0.17
TRA2A-207ENST00000486934 NUDT7P0C024 238 aa13.98□□□□□ -0.17
TRA2A-207ENST00000486934 SPRYD3Q8NCJ5 442 aa13.98□□□□□ -0.17
TRA2A-207ENST00000486934 PLCB2Q00722 1185 aa13.93□□□□□ -0.18
TRA2A-207ENST00000486934 CADPS2Q86UW7 1296 aa13.93□□□□□ -0.18
TRA2A-207ENST00000486934 LHX6Q9UPM6 363 aa13.93□□□□□ -0.18
TRA2A-207ENST00000486934 PBX2P40425 430 aa13.91□□□□□ -0.18
TRA2A-207ENST00000486934 AXIN2Q9Y2T1 843 aa13.91□□□□□ -0.18
TRA2A-207ENST00000486934 PCDHGA4Q9Y5G9 962 aa13.91□□□□□ -0.18
TRA2A-207ENST00000486934 POTEEQ6S8J3 1075 aa13.89□□□□□ -0.19
TRA2A-207ENST00000486934 RYDENQ9NUL5 291 aaKnown RBP13.89□□□□□ -0.19
TRA2A-207ENST00000486934 SLC34A2O95436 690 aa13.88□□□□□ -0.19
TRA2A-207ENST00000486934 TMC2Q8TDI7 906 aa13.87□□□□□ -0.19
TRA2A-207ENST00000486934 TSHZ2Q9NRE2 1034 aa13.86□□□□□ -0.19
TRA2A-207ENST00000486934 NCKAP5LQ9HCH0 1330 aa13.8□□□□□ -0.2
TRA2A-207ENST00000486934 ARHGAP33O14559 1287 aa13.76□□□□□ -0.21
TRA2A-207ENST00000486934 ADGRD1Q6QNK2 874 aa13.76□□□□□ -0.21
TRA2A-207ENST00000486934 PLA2G2EQ9NZK7 142 aa13.76□□□□□ -0.21
TRA2A-207ENST00000486934 HCSTQ9UBK5 93 aa13.76□□□□□ -0.21
TRA2A-207ENST00000486934 CRISPLD2Q9H0B8 497 aa13.75□□□□□ -0.21
TRA2A-207ENST00000486934 PSDA5PKW4 1024 aaPredicted RBP13.72□□□□□ -0.21
TRA2A-207ENST00000486934 KDM4FA0A1W2PPD8 638 aa13.68□□□□□ -0.22
TRA2A-207ENST00000486934 HAP1P54257 671 aaPredicted RBP13.68□□□□□ -0.22
TRA2A-207ENST00000486934 PTCD2Q8WV60 388 aaKnown RBP13.68□□□□□ -0.22
TRA2A-207ENST00000486934 GPHNQ9NQX3 736 aaPredicted RBP13.68□□□□□ -0.22
TRA2A-207ENST00000486934 PSEN2P49810 448 aa13.67□□□□□ -0.22
TRA2A-207ENST00000486934 DSG2Q14126 1118 aa13.66□□□□□ -0.22
TRA2A-207ENST00000486934 DMRTA1Q5VZB9 504 aa13.66□□□□□ -0.22
TRA2A-207ENST00000486934 TK2O00142 265 aa13.64□□□□□ -0.23
TRA2A-207ENST00000486934 PLPP6Q8IY26 295 aa13.64□□□□□ -0.23
TRA2A-207ENST00000486934 KDM2AQ9Y2K7 1162 aa13.64□□□□□ -0.23
TRA2A-207ENST00000486934 FOXK1P85037 733 aa13.63□□□□□ -0.23
TRA2A-207ENST00000486934 MFSD10Q14728 455 aa13.63□□□□□ -0.23
TRA2A-207ENST00000486934 LARP6Q9BRS8 491 aaKnown RBP13.63□□□□□ -0.23
TRA2A-207ENST00000486934 HRO43593 1189 aa13.62□□□□□ -0.23
TRA2A-207ENST00000486934 PPP4R3BQ5MIZ7 849 aa13.6□□□□□ -0.23
TRA2A-207ENST00000486934 PDE4AP27815 886 aa13.59□□□□□ -0.23
TRA2A-207ENST00000486934 KCTD12Q96CX2 325 aaKnown RBP13.58□□□□□ -0.24
TRA2A-207ENST00000486934 TBC1D12O60347 775 aa13.57□□□□□ -0.24
TRA2A-207ENST00000486934 STAC3Q96MF2 364 aa13.57□□□□□ -0.24
TRA2A-207ENST00000486934 PPP1R15BQ5SWA1 713 aa13.56□□□□□ -0.24
TRA2A-207ENST00000486934 DDX27Q96GQ7 796 aaKnown RBP13.54□□□□□ -0.24
TRA2A-207ENST00000486934 KCNK17Q96T54 332 aa13.52□□□□□ -0.25
TRA2A-207ENST00000486934 KCNH8Q96L42 1107 aa13.51□□□□□ -0.25
TRA2A-207ENST00000486934 EMILIN3Q9NT22 766 aa13.5□□□□□ -0.25
TRA2A-207ENST00000486934 CAMK2BQ13554 666 aa13.47□□□□□ -0.25
TRA2A-207ENST00000486934 VPS9D1Q9Y2B5 631 aa13.46□□□□□ -0.25
TRA2A-207ENST00000486934 PTPN5P54829 565 aa13.45□□□□□ -0.26
TRA2A-207ENST00000486934 UPF1Q92900 1129 aaKnown RBP eCLIP13.44□□□□□ -0.26
TRA2A-207ENST00000486934 VSIG10Q8N0Z9 540 aa13.43□□□□□ -0.26
TRA2A-207ENST00000486934 ZNF454Q8N9F8 522 aa13.43□□□□□ -0.26
TRA2A-207ENST00000486934 OXER1Q8TDS5 423 aa13.42□□□□□ -0.26
TRA2A-207ENST00000486934 SLC24A1O60721 1099 aa13.39□□□□□ -0.27
TRA2A-207ENST00000486934 KCNV2Q8TDN2 545 aa13.39□□□□□ -0.27
TRA2A-207ENST00000486934 E2F4Q16254 413 aa13.38□□□□□ -0.27
TRA2A-207ENST00000486934 BCL2L12Q9HB09 334 aa13.37□□□□□ -0.27
TRA2A-207ENST00000486934 WDR70Q9NW82 654 aa13.37□□□□□ -0.27
TRA2A-207ENST00000486934 SLC4A5Q9BY07 1137 aa13.35□□□□□ -0.27
TRA2A-207ENST00000486934 DPYSL4O14531 572 aa13.33□□□□□ -0.28
TRA2A-207ENST00000486934 BHMG1C9JSJ3 638 aaPredicted RBP13.32□□□□□ -0.28
TRA2A-207ENST00000486934 PTPREP23469 700 aa13.32□□□□□ -0.28
TRA2A-207ENST00000486934 FOSBP53539 338 aa13.32□□□□□ -0.28
TRA2A-207ENST00000486934 THSD4Q6ZMP0 1018 aa13.32□□□□□ -0.28
TRA2A-207ENST00000486934 GOLGA8CPA6NN73 597 aa13.31□□□□□ -0.28
TRA2A-207ENST00000486934 ZBED2Q9BTP6 218 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms