RNA–Protein interactions for RNA: ENST00000485402.5

TTC3-219, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,626 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-219ENST00000485402 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.05■□□□□ 0.963e-9■■■■□ 21.4
TTC3-219ENST00000485402 KIF14Q15058 1648 aa21.05■□□□□ 0.96
TTC3-219ENST00000485402 TRIM52Q96A61 297 aa21.04■□□□□ 0.96
TTC3-219ENST00000485402 ABCC2Q92887 1545 aa21.04■□□□□ 0.96
TTC3-219ENST00000485402 RRP7BPQ9NSQ0 103 aa21.04■□□□□ 0.96
TTC3-219ENST00000485402 SIN3AQ96ST3 1273 aa21.03■□□□□ 0.96
TTC3-219ENST00000485402 PTPRKQ15262 1439 aa21.03■□□□□ 0.96
TTC3-219ENST00000485402 SETD5Q9C0A6 1442 aa21.03■□□□□ 0.96
TTC3-219ENST00000485402 MIA2Q96PC5 1412 aa21.01■□□□□ 0.95
TTC3-219ENST00000485402 NEFLP07196 543 aa21.01■□□□□ 0.95
TTC3-219ENST00000485402 GPATCH8Q9UKJ3 1502 aaKnown RBP20.98■□□□□ 0.95
TTC3-219ENST00000485402 NPM1P06748 294 aaKnown RBP eCLIP20.95■□□□□ 0.94
TTC3-219ENST00000485402 TCOF1Q13428 1488 aaKnown RBP20.94■□□□□ 0.94
TTC3-219ENST00000485402 CYB5RLQ6IPT4 315 aa20.92■□□□□ 0.94
TTC3-219ENST00000485402 UHRF1BP1LA0JNW5 1464 aa20.91■□□□□ 0.94
TTC3-219ENST00000485402 ABCC10Q5T3U5 1492 aa20.9■□□□□ 0.94
TTC3-219ENST00000485402 HNRNPMP52272 730 aaKnown RBP eCLIP20.9■□□□□ 0.943e-7■■■■□ 21.6
TTC3-219ENST00000485402 ZCCHC11Q5TAX3 1644 aaKnown RBP20.9■□□□□ 0.94
TTC3-219ENST00000485402 ADCY10Q96PN6 1610 aa20.9■□□□□ 0.94
TTC3-219ENST00000485402 KDM5BQ9UGL1 1544 aa20.9■□□□□ 0.94
TTC3-219ENST00000485402 CAMSAP2Q08AD1 1489 aa20.89■□□□□ 0.93
TTC3-219ENST00000485402 DAPK1P53355 1430 aa20.87■□□□□ 0.93
TTC3-219ENST00000485402 ABCC5O15440 1437 aa20.86■□□□□ 0.93
TTC3-219ENST00000485402 ITSN2Q9NZM3 1697 aa20.86■□□□□ 0.93
TTC3-219ENST00000485402 HFM1A2PYH4 1435 aa20.86■□□□□ 0.93
TTC3-219ENST00000485402 NAIPQ13075 1403 aa20.86■□□□□ 0.93
TTC3-219ENST00000485402 RBM19Q9Y4C8 960 aaKnown RBP20.85■□□□□ 0.93
TTC3-219ENST00000485402 CDC42BPAQ5VT25 1732 aa20.84■□□□□ 0.93
TTC3-219ENST00000485402 ANP32CO43423 234 aa20.83■□□□□ 0.93
TTC3-219ENST00000485402 BCL11AQ9H165 835 aa20.83■□□□□ 0.92
TTC3-219ENST00000485402 TSPY4P0CV99 314 aa20.83■□□□□ 0.92
TTC3-219ENST00000485402 TSPY10P0CW01 314 aa20.83■□□□□ 0.92
TTC3-219ENST00000485402 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.82■□□□□ 0.928e-9■■■■□ 23.3
TTC3-219ENST00000485402 IRX6P78412 446 aaPredicted RBP20.82■□□□□ 0.92
TTC3-219ENST00000485402 TTC37Q6PGP7 1564 aa20.81■□□□□ 0.92
TTC3-219ENST00000485402 ARHGAP5Q13017 1502 aa20.8■□□□□ 0.92
TTC3-219ENST00000485402 ASXL2Q76L83 1435 aa20.78■□□□□ 0.92
TTC3-219ENST00000485402 DNMT1P26358 1616 aaKnown RBP20.77■□□□□ 0.92
TTC3-219ENST00000485402 EFCAB2Q5VUJ9 269 aa20.77■□□□□ 0.91
TTC3-219ENST00000485402 WDR7Q9Y4E6 1490 aa20.77■□□□□ 0.91
TTC3-219ENST00000485402 AKNAQ7Z591 1439 aa20.74■□□□□ 0.91
TTC3-219ENST00000485402 CDC42BPBQ9Y5S2 1711 aa20.74■□□□□ 0.91
TTC3-219ENST00000485402 PREX2Q70Z35 1606 aa20.71■□□□□ 0.91
TTC3-219ENST00000485402 PLCH2O75038 1416 aa20.71■□□□□ 0.91
TTC3-219ENST00000485402 ROCK1Q13464 1354 aa20.71■□□□□ 0.91
TTC3-219ENST00000485402 ANKRD30AQ9BXX3 1397 aa20.71■□□□□ 0.91
TTC3-219ENST00000485402 NCOA1Q15788 1441 aa20.7■□□□□ 0.9
TTC3-219ENST00000485402 PPP1R15AO75807 674 aaPredicted RBP20.7■□□□□ 0.9
TTC3-219ENST00000485402 SAMD9LQ8IVG5 1584 aa20.69■□□□□ 0.9
TTC3-219ENST00000485402 KDM6BO15054 1643 aa20.69■□□□□ 0.9
TTC3-219ENST00000485402 C9orf84Q5VXU9 1444 aa20.69■□□□□ 0.9
TTC3-219ENST00000485402 MYO5CQ9NQX4 1742 aa20.68■□□□□ 0.9
TTC3-219ENST00000485402 MAPKBP1O60336 1514 aa20.68■□□□□ 0.9
TTC3-219ENST00000485402 MYT1LQ9UL68 1186 aa20.68■□□□□ 0.9
TTC3-219ENST00000485402 SYCP2Q9BX26 1530 aa20.67■□□□□ 0.9
TTC3-219ENST00000485402 HNRNPUQ00839 825 aaKnown RBP eCLIP20.67■□□□□ 0.9
TTC3-219ENST00000485402 FOXD1Q16676 465 aa20.67■□□□□ 0.9
TTC3-219ENST00000485402 MBD5Q9P267 1494 aa20.67■□□□□ 0.9
TTC3-219ENST00000485402 RSPH4AQ5TD94 716 aa20.67■□□□□ 0.9
TTC3-219ENST00000485402 ERICH6Q7L0X2 663 aa20.66■□□□□ 0.9
TTC3-219ENST00000485402 RIMBP3CA6NJZ7 1639 aa20.66■□□□□ 0.9
TTC3-219ENST00000485402 RIMBP3BA6NNM3 1639 aa20.66■□□□□ 0.9
TTC3-219ENST00000485402 RIMBP3Q9UFD9 1639 aa20.66■□□□□ 0.9
TTC3-219ENST00000485402 MPHOSPH9Q99550 1183 aa20.65■□□□□ 0.9
TTC3-219ENST00000485402 AFAP1Q8N556 730 aa20.65■□□□□ 0.9
TTC3-219ENST00000485402 CCDC141Q6ZP82 1450 aa20.64■□□□□ 0.89
TTC3-219ENST00000485402 SLC4A1APQ9BWU0 796 aaKnown RBP20.64■□□□□ 0.89
TTC3-219ENST00000485402 GCC2Q8IWJ2 1684 aa20.63■□□□□ 0.89
TTC3-219ENST00000485402 KIF15Q9NS87 1388 aa20.62■□□□□ 0.89
TTC3-219ENST00000485402 ANKRD50Q9ULJ7 1429 aa20.61■□□□□ 0.89
TTC3-219ENST00000485402 ARHGEF12Q9NZN5 1544 aa20.6■□□□□ 0.89
TTC3-219ENST00000485402 FANCAO15360 1455 aa20.6■□□□□ 0.89
TTC3-219ENST00000485402 PLEKHH2Q8IVE3 1493 aa20.59■□□□□ 0.89
TTC3-219ENST00000485402 TONSLQ96HA7 1378 aa20.58■□□□□ 0.89
TTC3-219ENST00000485402 TRAPPC8Q9Y2L5 1435 aa20.58■□□□□ 0.88
TTC3-219ENST00000485402 CROCC2H7BZ55 1655 aa20.58■□□□□ 0.88
TTC3-219ENST00000485402 ADGRL2O95490 1459 aa20.58■□□□□ 0.88
TTC3-219ENST00000485402 CNGB1Q14028 1251 aaPredicted RBP20.58■□□□□ 0.88
TTC3-219ENST00000485402 KIAA1107Q9UPP5 1409 aa20.58■□□□□ 0.88
TTC3-219ENST00000485402 CCER2I3L3R5 266 aa20.57■□□□□ 0.88
TTC3-219ENST00000485402 ARHGEF5Q12774 1597 aa20.57■□□□□ 0.88
TTC3-219ENST00000485402 CD109Q6YHK3 1445 aa20.57■□□□□ 0.88
TTC3-219ENST00000485402 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.57■□□□□ 0.885e-7■■□□□ 14
TTC3-219ENST00000485402 SHANK2Q9UPX8 1470 aa20.56■□□□□ 0.88
TTC3-219ENST00000485402 MSH5O43196 834 aa20.56■□□□□ 0.88
TTC3-219ENST00000485402 ADGBQ8N7X0 1667 aa20.56■□□□□ 0.88
TTC3-219ENST00000485402 SPAG9O60271 1321 aaKnown RBP20.55■□□□□ 0.88
TTC3-219ENST00000485402 ABCA9Q8IUA7 1624 aa20.54■□□□□ 0.88
TTC3-219ENST00000485402 SCAPERQ9BY12 1400 aa20.53■□□□□ 0.88
TTC3-219ENST00000485402 NUP155O75694 1391 aa20.53■□□□□ 0.88
TTC3-219ENST00000485402 FAM69CQ0P6D2 419 aa20.52■□□□□ 0.88
TTC3-219ENST00000485402 ADGRL1O94910 1474 aa20.51■□□□□ 0.87
TTC3-219ENST00000485402 ABCC1P33527 1531 aa20.51■□□□□ 0.87
TTC3-219ENST00000485402 PKD2Q13563 968 aa20.5■□□□□ 0.87
TTC3-219ENST00000485402 DENND4BO75064 1496 aaPredicted RBP20.48■□□□□ 0.87
TTC3-219ENST00000485402 ARAP3Q8WWN8 1544 aa20.46■□□□□ 0.87
TTC3-219ENST00000485402 FAM9BQ8IZU0 186 aa20.46■□□□□ 0.87
TTC3-219ENST00000485402 TIMELESSQ9UNS1 1208 aa20.45■□□□□ 0.86
TTC3-219ENST00000485402 RAPGEF3O95398 923 aa20.44■□□□□ 0.86
TTC3-219ENST00000485402 PZPP20742 1482 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms