RNA–Protein interactions for RNA: ENST00000485363.1

SIK3-211, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-211ENST00000485363 ADAMTSL3P82987 1691 aa25.68■■□□□ 1.7
SIK3-211ENST00000485363 POGZQ7Z3K3 1410 aa25.68■■□□□ 1.7
SIK3-211ENST00000485363 ARHGAP5Q13017 1502 aa25.68■■□□□ 1.7
SIK3-211ENST00000485363 MAGI2Q86UL8 1455 aa25.67■■□□□ 1.7
SIK3-211ENST00000485363 ZFYVE16Q7Z3T8 1539 aa25.67■■□□□ 1.7
SIK3-211ENST00000485363 BCORL1Q5H9F3 1711 aa25.66■■□□□ 1.7
SIK3-211ENST00000485363 YEATS2Q9ULM3 1422 aa25.63■■□□□ 1.69
SIK3-211ENST00000485363 CDC42BPBQ9Y5S2 1711 aa25.62■■□□□ 1.69
SIK3-211ENST00000485363 HECW2Q9P2P5 1572 aa25.61■■□□□ 1.69
SIK3-211ENST00000485363 PTPRMP28827 1452 aa25.6■■□□□ 1.69
SIK3-211ENST00000485363 PREX2Q70Z35 1606 aa25.59■■□□□ 1.69
SIK3-211ENST00000485363 MADDQ8WXG6 1647 aa25.58■■□□□ 1.69
SIK3-211ENST00000485363 ZNF518AQ6AHZ1 1483 aa25.58■■□□□ 1.69
SIK3-211ENST00000485363 CEP162Q5TB80 1403 aa25.54■■□□□ 1.68
SIK3-211ENST00000485363 CDC42BPAQ5VT25 1732 aa25.54■■□□□ 1.68
SIK3-211ENST00000485363 SIGLEC1Q9BZZ2 1709 aa25.53■■□□□ 1.68
SIK3-211ENST00000485363 ATP10AO60312 1499 aa25.53■■□□□ 1.68
SIK3-211ENST00000485363 KDM5CP41229 1560 aa25.52■■□□□ 1.68
SIK3-211ENST00000485363 AFAP1Q8N556 730 aa25.52■■□□□ 1.68
SIK3-211ENST00000485363 ABCC1P33527 1531 aa25.5■■□□□ 1.67
SIK3-211ENST00000485363 RIMS1Q86UR5 1692 aaKnown RBP25.5■■□□□ 1.67
SIK3-211ENST00000485363 C9orf84Q5VXU9 1444 aa25.49■■□□□ 1.67
SIK3-211ENST00000485363 MYT1LQ9UL68 1186 aa25.48■■□□□ 1.67
SIK3-211ENST00000485363 ITSN2Q9NZM3 1697 aa25.47■■□□□ 1.67
SIK3-211ENST00000485363 MTUS2Q5JR59 1369 aa25.46■■□□□ 1.67
SIK3-211ENST00000485363 MLECQ14165 292 aa25.45■■□□□ 1.66
SIK3-211ENST00000485363 ARHGEF12Q9NZN5 1544 aa25.45■■□□□ 1.66
SIK3-211ENST00000485363 GPATCH8Q9UKJ3 1502 aaKnown RBP25.45■■□□□ 1.66
SIK3-211ENST00000485363 MLH3Q9UHC1 1453 aa25.44■■□□□ 1.66
SIK3-211ENST00000485363 TRAPPC8Q9Y2L5 1435 aa25.44■■□□□ 1.66
SIK3-211ENST00000485363 ZNF777Q9ULD5 760 aaPredicted RBP25.43■■□□□ 1.66
SIK3-211ENST00000485363 FER1L4A9Z1Z3 1794 aa25.42■■□□□ 1.66
SIK3-211ENST00000485363 DIP2CQ9Y2E4 1556 aa25.41■■□□□ 1.66
SIK3-211ENST00000485363 CCNB3Q8WWL7 1395 aa25.41■■□□□ 1.66
SIK3-211ENST00000485363 SAMD9LQ8IVG5 1584 aa25.4■■□□□ 1.66
SIK3-211ENST00000485363 EHBP1L1Q8N3D4 1523 aa25.39■■□□□ 1.66
SIK3-211ENST00000485363 LOC105371045A0A1W2PR82 267 aa25.39■■□□□ 1.66
SIK3-211ENST00000485363 ABCA6Q8N139 1617 aa25.38■■□□□ 1.65
SIK3-211ENST00000485363 CFDP1Q9UEE9 299 aaPredicted RBP25.38■■□□□ 1.65
SIK3-211ENST00000485363 REREQ9P2R6 1566 aa25.38■■□□□ 1.65
SIK3-211ENST00000485363 SYCP2Q9BX26 1530 aa25.36■■□□□ 1.65
SIK3-211ENST00000485363 PLPPR3Q6T4P5 718 aa25.35■■□□□ 1.65
SIK3-211ENST00000485363 PLEKHH2Q8IVE3 1493 aa25.34■■□□□ 1.65
SIK3-211ENST00000485363 KIDINS220Q9ULH0 1771 aa25.34■■□□□ 1.65
SIK3-211ENST00000485363 KIAA1107Q9UPP5 1409 aa25.32■■□□□ 1.64
SIK3-211ENST00000485363 HNRNPMP52272 730 aaKnown RBP eCLIP25.32■■□□□ 1.649e-7■■■■■ 27.5
SIK3-211ENST00000485363 TIAM1Q13009 1591 aa25.31■■□□□ 1.64
SIK3-211ENST00000485363 LMTK3Q96Q04 1460 aa25.31■■□□□ 1.64
SIK3-211ENST00000485363 AGLP35573 1532 aa25.3■■□□□ 1.64
SIK3-211ENST00000485363 SPAG9O60271 1321 aaKnown RBP25.29■■□□□ 1.64
SIK3-211ENST00000485363 VPS8Q8N3P4 1428 aa25.29■■□□□ 1.64
SIK3-211ENST00000485363 SUPT6HQ7KZ85 1726 aaKnown RBP25.26■■□□□ 1.63
SIK3-211ENST00000485363 ATP7AQ04656 1500 aa25.23■■□□□ 1.63
SIK3-211ENST00000485363 INO80Q9ULG1 1556 aaPredicted RBP25.22■■□□□ 1.63
SIK3-211ENST00000485363 NCOA2Q15596 1464 aa25.21■■□□□ 1.63
SIK3-211ENST00000485363 ZNF644Q9H582 1327 aaPredicted RBP25.21■■□□□ 1.63
SIK3-211ENST00000485363 CEBPAP49715 358 aaPredicted RBP25.2■■□□□ 1.62
SIK3-211ENST00000485363 ESF1Q9H501 851 aaKnown RBP25.2■■□□□ 1.62
SIK3-211ENST00000485363 PREX1Q8TCU6 1659 aa25.17■■□□□ 1.62
SIK3-211ENST00000485363 MBD5Q9P267 1494 aa25.16■■□□□ 1.62
SIK3-211ENST00000485363 HSPA2P54652 639 aa25.16■■□□□ 1.62
SIK3-211ENST00000485363 LRRC9Q6ZRR7 1453 aa25.15■■□□□ 1.62
SIK3-211ENST00000485363 A2MP01023 1474 aa25.15■■□□□ 1.62
SIK3-211ENST00000485363 C3P01024 1663 aa25.13■■□□□ 1.61
SIK3-211ENST00000485363 CNTLNQ9NXG0 1405 aa25.13■■□□□ 1.61
SIK3-211ENST00000485363 MAP3K1Q13233 1512 aa25.13■■□□□ 1.61
SIK3-211ENST00000485363 SETD1BQ9UPS6 1966 aaKnown RBP25.13■■□□□ 1.61
SIK3-211ENST00000485363 PLXNC1O60486 1568 aa25.13■■□□□ 1.61
SIK3-211ENST00000485363 CAMSAP2Q08AD1 1489 aa25.12■■□□□ 1.61
SIK3-211ENST00000485363 ADGBQ8N7X0 1667 aa25.12■■□□□ 1.61
SIK3-211ENST00000485363 ILDR1Q86SU0 546 aaPredicted RBP25.11■■□□□ 1.61
SIK3-211ENST00000485363 RTEL1-TNFRSF6BF6WH68 1400 aa25.11■■□□□ 1.61
SIK3-211ENST00000485363 RSPH4AQ5TD94 716 aa25.09■■□□□ 1.61
SIK3-211ENST00000485363 CCDC141Q6ZP82 1450 aa25.09■■□□□ 1.61
SIK3-211ENST00000485363 UHRF1BP1Q6BDS2 1440 aa25.08■■□□□ 1.61
SIK3-211ENST00000485363 MROH2AA6NES4 1674 aa25.07■■□□□ 1.6
SIK3-211ENST00000485363 KANK4Q5T7N3 995 aaPredicted RBP25.06■■□□□ 1.6
SIK3-211ENST00000485363 GGT6Q6P531 493 aa25.03■■□□□ 1.6
SIK3-211ENST00000485363 ARHGEF5Q12774 1597 aa25.02■■□□□ 1.6
SIK3-211ENST00000485363 ZMYM3Q14202 1370 aa25.01■■□□□ 1.59
SIK3-211ENST00000485363 CLTCQ00610 1675 aaKnown RBP25.01■■□□□ 1.59
SIK3-211ENST00000485363 APLP2Q06481 763 aa25■■□□□ 1.59
SIK3-211ENST00000485363 DHX29Q7Z478 1369 aaKnown RBP25■■□□□ 1.59
SIK3-211ENST00000485363 TSPY4P0CV99 314 aa24.99■■□□□ 1.59
SIK3-211ENST00000485363 TSPY10P0CW01 314 aa24.99■■□□□ 1.59
SIK3-211ENST00000485363 PPP6R1Q9UPN7 881 aa24.99■■□□□ 1.59
SIK3-211ENST00000485363 NPATQ14207 1427 aa24.98■■□□□ 1.59
SIK3-211ENST00000485363 MYOM3Q5VTT5 1437 aa24.97■■□□□ 1.59
SIK3-211ENST00000485363 MIA2Q96PC5 1412 aa24.97■■□□□ 1.59
SIK3-211ENST00000485363 STRCQ7RTU9 1775 aa24.93■■□□□ 1.58
SIK3-211ENST00000485363 KIF3BO15066 747 aa24.92■■□□□ 1.58
SIK3-211ENST00000485363 DMRT2Q9Y5R5 561 aa24.91■■□□□ 1.58
SIK3-211ENST00000485363 MAST1Q9Y2H9 1570 aa24.9■■□□□ 1.58
SIK3-211ENST00000485363 FBXO41Q8TF61 875 aa24.9■■□□□ 1.58
SIK3-211ENST00000485363 PTPRKQ15262 1439 aa24.88■■□□□ 1.57
SIK3-211ENST00000485363 FAM135AQ9P2D6 1515 aa24.86■■□□□ 1.57
SIK3-211ENST00000485363 MYO3AQ8NEV4 1616 aa24.84■■□□□ 1.57
SIK3-211ENST00000485363 KDM5DQ9BY66 1539 aa24.84■■□□□ 1.57
SIK3-211ENST00000485363 PTPN23Q9H3S7 1636 aa24.82■■□□□ 1.56
SIK3-211ENST00000485363 WASHC2CQ9Y4E1 1318 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms