RNA–Protein interactions for RNA: ENST00000485136.5

CNOT10-217, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 2

Gene CNOT10, Length 608 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-217ENST00000485136 LMOD2Q6P5Q4 547 aa14.01□□□□□ -0.17
CNOT10-217ENST00000485136 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.01□□□□□ -0.17
CNOT10-217ENST00000485136 OCEL1Q9H607 264 aa14.01□□□□□ -0.17
CNOT10-217ENST00000485136 GPHNQ9NQX3 736 aaPredicted RBP14.01□□□□□ -0.17
CNOT10-217ENST00000485136 CAMK2BQ13554 666 aa14□□□□□ -0.17
CNOT10-217ENST00000485136 PPP1R15BQ5SWA1 713 aa13.99□□□□□ -0.17
CNOT10-217ENST00000485136 SEMA3EO15041 775 aa13.98□□□□□ -0.17
CNOT10-217ENST00000485136 ARIH1Q9Y4X5 557 aaPredicted RBP13.98□□□□□ -0.17
CNOT10-217ENST00000485136 TESPA1A2RU30 521 aaPredicted RBP13.95□□□□□ -0.18
CNOT10-217ENST00000485136 PLCG2P16885 1265 aa13.95□□□□□ -0.18
CNOT10-217ENST00000485136 BOLA1Q9Y3E2 137 aa13.95□□□□□ -0.18
CNOT10-217ENST00000485136 G3V3G9 751 aa13.94□□□□□ -0.18
CNOT10-217ENST00000485136 TMC2Q8TDI7 906 aa13.94□□□□□ -0.18
CNOT10-217ENST00000485136 TMEM121BQ9BXQ6 578 aaPredicted RBP13.93□□□□□ -0.18
CNOT10-217ENST00000485136 DSG2Q14126 1118 aa13.91□□□□□ -0.18
CNOT10-217ENST00000485136 PELP1Q8IZL8 1130 aaKnown RBP13.88□□□□□ -0.19
CNOT10-217ENST00000485136 FOXK1P85037 733 aa13.87□□□□□ -0.19
CNOT10-217ENST00000485136 L3MBTL3Q96JM7 780 aaPredicted RBP13.87□□□□□ -0.19
CNOT10-217ENST00000485136 SEC24BO95487 1268 aa13.86□□□□□ -0.19
CNOT10-217ENST00000485136 SMYD5Q6GMV2 418 aa13.86□□□□□ -0.19
CNOT10-217ENST00000485136 C2orf72A6NCS6 295 aa13.84□□□□□ -0.19
CNOT10-217ENST00000485136 EMILIN3Q9NT22 766 aa13.84□□□□□ -0.19
CNOT10-217ENST00000485136 COLQQ9Y215 455 aaPredicted RBP13.84□□□□□ -0.19
CNOT10-217ENST00000485136 SLC39A7Q92504 469 aa13.83□□□□□ -0.2
CNOT10-217ENST00000485136 DPYSL4O14531 572 aa13.82□□□□□ -0.2
CNOT10-217ENST00000485136 KIF3CO14782 793 aa13.82□□□□□ -0.2
CNOT10-217ENST00000485136 PLPP6Q8IY26 295 aa13.82□□□□□ -0.2
CNOT10-217ENST00000485136 ZC3H15Q8WU90 426 aaKnown RBP13.8□□□□□ -0.2
CNOT10-217ENST00000485136 C7P10643 843 aa13.78□□□□□ -0.2
CNOT10-217ENST00000485136 SPDYE16A6NNV3 312 aaPredicted RBP13.77□□□□□ -0.21
CNOT10-217ENST00000485136 MLLT3P42568 568 aaPredicted RBP13.76□□□□□ -0.21
CNOT10-217ENST00000485136 PDIA6Q15084 440 aa13.76□□□□□ -0.21
CNOT10-217ENST00000485136 POTEFA5A3E0 1075 aa13.75□□□□□ -0.21
CNOT10-217ENST00000485136 TMEM92Q6UXU6 159 aa13.75□□□□□ -0.21
CNOT10-217ENST00000485136 METRNQ9UJH8 293 aa13.75□□□□□ -0.21
CNOT10-217ENST00000485136 MAP3K9P80192 1104 aa13.68□□□□□ -0.22
CNOT10-217ENST00000485136 RBM26Q5T8P6 1007 aaKnown RBP13.68□□□□□ -0.22
CNOT10-217ENST00000485136 C3orf67Q6ZVT6 689 aa13.67□□□□□ -0.22
CNOT10-217ENST00000485136 UPF1Q92900 1129 aaKnown RBP eCLIP13.67□□□□□ -0.22
CNOT10-217ENST00000485136 ZMYND10O75800 440 aa13.65□□□□□ -0.22
CNOT10-217ENST00000485136 GPIHBP1Q8IV16 184 aa13.65□□□□□ -0.22
CNOT10-217ENST00000485136 OXER1Q8TDS5 423 aa13.63□□□□□ -0.23
CNOT10-217ENST00000485136 SLC24A3Q9HC58 644 aa13.63□□□□□ -0.23
CNOT10-217ENST00000485136 BARGINQ6ZT62 677 aa13.59□□□□□ -0.23
CNOT10-217ENST00000485136 MAMSTRQ6ZN01 415 aa13.58□□□□□ -0.24
CNOT10-217ENST00000485136 GRXCR2A6NFK2 248 aa13.57□□□□□ -0.24
CNOT10-217ENST00000485136 POTEB2H3BUK9 544 aa13.55□□□□□ -0.24
CNOT10-217ENST00000485136 TBC1D12O60347 775 aa13.55□□□□□ -0.24
CNOT10-217ENST00000485136 BRPF1P55201 1214 aaPredicted RBP13.55□□□□□ -0.24
CNOT10-217ENST00000485136 OTUD5Q96G74 571 aa13.55□□□□□ -0.24
CNOT10-217ENST00000485136 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.53□□□□□ -0.24
CNOT10-217ENST00000485136 EVI5O60447 810 aa13.52□□□□□ -0.25
CNOT10-217ENST00000485136 PTGER2P43116 358 aa13.52□□□□□ -0.25
CNOT10-217ENST00000485136 PTCD2Q8WV60 388 aaKnown RBP13.52□□□□□ -0.25
CNOT10-217ENST00000485136 ZNF316A6NFI3 1004 aaPredicted RBP13.51□□□□□ -0.25
CNOT10-217ENST00000485136 TMEM132AQ24JP5 1023 aa13.51□□□□□ -0.25
CNOT10-217ENST00000485136 NEUROD2Q15784 382 aa13.5□□□□□ -0.25
CNOT10-217ENST00000485136 DDX12PQ92771 950 aa13.5□□□□□ -0.25
CNOT10-217ENST00000485136 SLC34A2O95436 690 aa13.49□□□□□ -0.25
CNOT10-217ENST00000485136 OSBPP22059 807 aa13.49□□□□□ -0.25
CNOT10-217ENST00000485136 KRI1Q8N9T8 703 aaKnown RBP13.49□□□□□ -0.25
CNOT10-217ENST00000485136 NUTM2FA1L443 756 aa13.47□□□□□ -0.25
CNOT10-217ENST00000485136 GPR37O15354 613 aa13.47□□□□□ -0.25
CNOT10-217ENST00000485136 AK7Q96M32 723 aa13.47□□□□□ -0.25
CNOT10-217ENST00000485136 SCUBE2Q9NQ36 999 aa13.46□□□□□ -0.25
CNOT10-217ENST00000485136 ANO8Q9HCE9 1232 aaPredicted RBP13.41□□□□□ -0.26
CNOT10-217ENST00000485136 PRIM1P49642 420 aaKnown RBP13.39□□□□□ -0.27
CNOT10-217ENST00000485136 PCDHGA4Q9Y5G9 962 aa13.39□□□□□ -0.27
CNOT10-217ENST00000485136 FCHSD2O94868 740 aa13.37□□□□□ -0.27
CNOT10-217ENST00000485136 POTEJP0CG39 1038 aa13.37□□□□□ -0.27
CNOT10-217ENST00000485136 GTF3C3Q9Y5Q9 886 aa13.36□□□□□ -0.27
CNOT10-217ENST00000485136 TRIM66O15016 1216 aa13.35□□□□□ -0.27
CNOT10-217ENST00000485136 GNPATO15228 680 aa13.35□□□□□ -0.27
CNOT10-217ENST00000485136 HIC1Q14526 733 aa13.35□□□□□ -0.27
CNOT10-217ENST00000485136 MINK1Q8N4C8 1332 aaPredicted RBP13.35□□□□□ -0.27
CNOT10-217ENST00000485136 PHF14O94880 888 aa13.34□□□□□ -0.27
CNOT10-217ENST00000485136 MAP2K5Q13163 448 aa13.34□□□□□ -0.27
CNOT10-217ENST00000485136 EPAS1Q99814 870 aa13.34□□□□□ -0.27
CNOT10-217ENST00000485136 GPBP1L1Q9HC44 474 aaPredicted RBP13.32□□□□□ -0.28
CNOT10-217ENST00000485136 EN1Q05925 392 aaPredicted RBP13.31□□□□□ -0.28
CNOT10-217ENST00000485136 PDE4DQ08499 809 aa13.31□□□□□ -0.28
CNOT10-217ENST00000485136 PTGDRQ13258 359 aa13.31□□□□□ -0.28
CNOT10-217ENST00000485136 CCDC102AQ96A19 550 aa13.3□□□□□ -0.28
CNOT10-217ENST00000485136 IRF6O14896 467 aa13.29□□□□□ -0.28
CNOT10-217ENST00000485136 PCDHGA10Q9Y5H3 936 aa13.29□□□□□ -0.28
CNOT10-217ENST00000485136 MAP3K7O43318 606 aa13.28□□□□□ -0.28
CNOT10-217ENST00000485136 FECHP22830 423 aa13.28□□□□□ -0.28
CNOT10-217ENST00000485136 DOK7Q18PE1 504 aa13.28□□□□□ -0.28
CNOT10-217ENST00000485136 KDM4FA0A1W2PPD8 638 aa13.27□□□□□ -0.29
CNOT10-217ENST00000485136 TYW1BQ6NUM6 668 aa13.27□□□□□ -0.29
CNOT10-217ENST00000485136 SLAIN1Q8ND83 568 aa13.27□□□□□ -0.29
CNOT10-217ENST00000485136 RBM33Q96EV2 1170 aaKnown RBP13.27□□□□□ -0.29
CNOT10-217ENST00000485136 JPH4Q96JJ6 628 aa13.27□□□□□ -0.29
CNOT10-217ENST00000485136 CDHR5Q9HBB8 845 aa13.27□□□□□ -0.29
CNOT10-217ENST00000485136 KDM4CQ9H3R0 1056 aa13.26□□□□□ -0.29
CNOT10-217ENST00000485136 HOXB3P14651 431 aaPredicted RBP13.24□□□□□ -0.29
CNOT10-217ENST00000485136 FBXW7Q969H0 707 aa13.23□□□□□ -0.29
CNOT10-217ENST00000485136 RIMBP2O15034 1052 aa13.22□□□□□ -0.29
CNOT10-217ENST00000485136 NUDT7P0C024 238 aa13.22□□□□□ -0.29
CNOT10-217ENST00000485136 FOSBP53539 338 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms