RNA–Protein interactions for RNA: ENST00000485042.1

XPA-203, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 706 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-203ENST00000485042 KCNV2Q8TDN2 545 aa9.09□□□□□ -0.95
XPA-203ENST00000485042 SNPHO15079 494 aa9.07□□□□□ -0.96
XPA-203ENST00000485042 EFCAB3Q8N7B9 438 aa9.05□□□□□ -0.96
XPA-203ENST00000485042 OCEL1Q9H607 264 aa9.05□□□□□ -0.96
XPA-203ENST00000485042 CABP2Q9NPB3 220 aa9.05□□□□□ -0.96
XPA-203ENST00000485042 NLRP6P59044 892 aa9.04□□□□□ -0.96
XPA-203ENST00000485042 MARVELD3Q96A59 401 aa9.03□□□□□ -0.96
XPA-203ENST00000485042 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.03□□□□□ -0.96
XPA-203ENST00000485042 SOX12O15370 315 aa9.02□□□□□ -0.97
XPA-203ENST00000485042 PPP1R37O75864 691 aa9.02□□□□□ -0.97
XPA-203ENST00000485042 TULP1O00294 542 aaPredicted RBP9.01□□□□□ -0.97
XPA-203ENST00000485042 LMOD2Q6P5Q4 547 aa9.01□□□□□ -0.97
XPA-203ENST00000485042 PHF8Q9UPP1 1060 aa9.01□□□□□ -0.97
XPA-203ENST00000485042 FBXO22Q8NEZ5 403 aa9□□□□□ -0.97
XPA-203ENST00000485042 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.99□□□□□ -0.97
XPA-203ENST00000485042 E2F4Q16254 413 aa8.98□□□□□ -0.97
XPA-203ENST00000485042 ARHGEF1Q92888 912 aaKnown RBP8.98□□□□□ -0.97
XPA-203ENST00000485042 EMP3P54852 163 aa8.94□□□□□ -0.98
XPA-203ENST00000485042 GTF3C3Q9Y5Q9 886 aa8.94□□□□□ -0.98
XPA-203ENST00000485042 GOLGA2Q08379 1002 aa8.93□□□□□ -0.98
XPA-203ENST00000485042 PDE4AP27815 886 aa8.91□□□□□ -0.98
XPA-203ENST00000485042 TMEM132AQ24JP5 1023 aa8.91□□□□□ -0.98
XPA-203ENST00000485042 LARP6Q9BRS8 491 aaKnown RBP8.91□□□□□ -0.98
XPA-203ENST00000485042 KRTAP3-3Q9BYR6 98 aa8.91□□□□□ -0.98
XPA-203ENST00000485042 KRTAP3-2Q9BYR7 98 aa8.91□□□□□ -0.98
XPA-203ENST00000485042 C3orf67Q6ZVT6 689 aa8.9□□□□□ -0.98
XPA-203ENST00000485042 PDCD7Q8N8D1 485 aaKnown RBP8.9□□□□□ -0.98
XPA-203ENST00000485042 NCKAP5LQ9HCH0 1330 aa8.89□□□□□ -0.99
XPA-203ENST00000485042 POTEB3A0JP26 581 aa8.89□□□□□ -0.99
XPA-203ENST00000485042 SEMA3EO15041 775 aa8.89□□□□□ -0.99
XPA-203ENST00000485042 POTEBQ6S5H4 581 aa8.89□□□□□ -0.99
XPA-203ENST00000485042 HS3ST6Q96QI5 342 aa8.89□□□□□ -0.99
XPA-203ENST00000485042 L3MBTL3Q96JM7 780 aaPredicted RBP8.88□□□□□ -0.99
XPA-203ENST00000485042 MS4A4AQ96JQ5 239 aa8.88□□□□□ -0.99
XPA-203ENST00000485042 TESPA1A2RU30 521 aaPredicted RBP8.87□□□□□ -0.99
XPA-203ENST00000485042 TIMELESSQ9UNS1 1208 aa8.87□□□□□ -0.99
XPA-203ENST00000485042 FAM205CA6NFA0 338 aa8.86□□□□□ -0.99
XPA-203ENST00000485042 MKRN3Q13064 507 aaKnown RBP8.86□□□□□ -0.99
XPA-203ENST00000485042 ZC3H15Q8WU90 426 aaKnown RBP8.86□□□□□ -0.99
XPA-203ENST00000485042 DDX27Q96GQ7 796 aaKnown RBP8.85□□□□□ -0.99
XPA-203ENST00000485042 SMYD5Q6GMV2 418 aa8.84□□□□□ -0.99
XPA-203ENST00000485042 MFSD10Q14728 455 aa8.83□□□□□ -1
XPA-203ENST00000485042 ERICH6Q7L0X2 663 aa8.83□□□□□ -1
XPA-203ENST00000485042 CRISPLD2Q9H0B8 497 aa8.83□□□□□ -1
XPA-203ENST00000485042 BRPF1P55201 1214 aaPredicted RBP8.8□□□□□ -1
XPA-203ENST00000485042 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.8□□□□□ -11e-10■■□□□ 11.6
XPA-203ENST00000485042 SLC24A3Q9HC58 644 aa8.79□□□□□ -1
XPA-203ENST00000485042 NEUROD2Q15784 382 aa8.78□□□□□ -1
XPA-203ENST00000485042 ARIH1Q9Y4X5 557 aaPredicted RBP8.78□□□□□ -1
XPA-203ENST00000485042 CAMK2BQ13554 666 aa8.76□□□□□ -1.01
XPA-203ENST00000485042 ZMYND10O75800 440 aa8.74□□□□□ -1.01
XPA-203ENST00000485042 PPP1R15BQ5SWA1 713 aa8.74□□□□□ -1.01
XPA-203ENST00000485042 ILDR1Q86SU0 546 aaPredicted RBP8.74□□□□□ -1.01
XPA-203ENST00000485042 HOXB3P14651 431 aaPredicted RBP8.72□□□□□ -1.01
XPA-203ENST00000485042 C14orf37Q86TY3 774 aa8.72□□□□□ -1.01
XPA-203ENST00000485042 GPHNQ9NQX3 736 aaPredicted RBP8.72□□□□□ -1.01
XPA-203ENST00000485042 DPY19L2Q6NUT2 758 aa8.71□□□□□ -1.02
XPA-203ENST00000485042 HOXB1P14653 301 aaPredicted RBP8.7□□□□□ -1.02
XPA-203ENST00000485042 RNF166Q96A37 237 aaPredicted RBP8.7□□□□□ -1.02
XPA-203ENST00000485042 MLLT3P42568 568 aaPredicted RBP8.69□□□□□ -1.02
XPA-203ENST00000485042 RBM26Q5T8P6 1007 aaKnown RBP8.69□□□□□ -1.02
XPA-203ENST00000485042 BARGINQ6ZT62 677 aa8.69□□□□□ -1.02
XPA-203ENST00000485042 GPIHBP1Q8IV16 184 aa8.69□□□□□ -1.02
XPA-203ENST00000485042 ZNF710Q8N1W2 664 aa8.69□□□□□ -1.02
XPA-203ENST00000485042 G3V3G9 751 aa8.68□□□□□ -1.02
XPA-203ENST00000485042 DPYSL4O14531 572 aa8.68□□□□□ -1.02
XPA-203ENST00000485042 KRI1Q8N9T8 703 aaKnown RBP8.68□□□□□ -1.02
XPA-203ENST00000485042 BOLA1Q9Y3E2 137 aa8.68□□□□□ -1.02
XPA-203ENST00000485042 ERBB3P21860 1342 aa8.68□□□□□ -1.02
XPA-203ENST00000485042 TMC2Q8TDI7 906 aa8.67□□□□□ -1.02
XPA-203ENST00000485042 SPDYE16A6NNV3 312 aaPredicted RBP8.65□□□□□ -1.02
XPA-203ENST00000485042 DSG2Q14126 1118 aa8.65□□□□□ -1.02
XPA-203ENST00000485042 DOK7Q18PE1 504 aa8.65□□□□□ -1.02
XPA-203ENST00000485042 AK7Q96M32 723 aa8.65□□□□□ -1.02
XPA-203ENST00000485042 EMILIN3Q9NT22 766 aa8.65□□□□□ -1.02
XPA-203ENST00000485042 MICALL2Q8IY33 904 aa8.64□□□□□ -1.03
XPA-203ENST00000485042 MYT1LQ9UL68 1186 aa8.63□□□□□ -1.03
XPA-203ENST00000485042 PDIA6Q15084 440 aa8.62□□□□□ -1.03
XPA-203ENST00000485042 FOXK1P85037 733 aa8.61□□□□□ -1.03
XPA-203ENST00000485042 VARS2Q5ST30 1063 aaKnown RBP8.61□□□□□ -1.03
XPA-203ENST00000485042 RIMBP2O15034 1052 aa8.6□□□□□ -1.03
XPA-203ENST00000485042 PLPP6Q8IY26 295 aa8.59□□□□□ -1.03
XPA-203ENST00000485042 GPBP1L1Q9HC44 474 aaPredicted RBP8.58□□□□□ -1.04
XPA-203ENST00000485042 ZNF687Q8N1G0 1237 aa8.57□□□□□ -1.04
XPA-203ENST00000485042 DAXXQ9UER7 740 aaPredicted RBP8.57□□□□□ -1.04
XPA-203ENST00000485042 C2orf72A6NCS6 295 aa8.56□□□□□ -1.04
XPA-203ENST00000485042 MAP3K9P80192 1104 aa8.56□□□□□ -1.04
XPA-203ENST00000485042 GRXCR2A6NFK2 248 aa8.55□□□□□ -1.04
XPA-203ENST00000485042 TRIM66O15016 1216 aa8.55□□□□□ -1.04
XPA-203ENST00000485042 IL27Q8NEV9 243 aa8.55□□□□□ -1.04
XPA-203ENST00000485042 PTGER2P43116 358 aa8.54□□□□□ -1.04
XPA-203ENST00000485042 PDE4DQ08499 809 aa8.54□□□□□ -1.04
XPA-203ENST00000485042 ZSWIM6Q9HCJ5 1215 aa8.54□□□□□ -1.04
XPA-203ENST00000485042 NUTM2FA1L443 756 aa8.53□□□□□ -1.04
XPA-203ENST00000485042 ARXQ96QS3 562 aa8.53□□□□□ -1.04
XPA-203ENST00000485042 KDM4CQ9H3R0 1056 aa8.53□□□□□ -1.04
XPA-203ENST00000485042 KIF3CO14782 793 aa8.52□□□□□ -1.05
XPA-203ENST00000485042 UPF1Q92900 1129 aaKnown RBP eCLIP8.52□□□□□ -1.05
XPA-203ENST00000485042 GPR153Q6NV75 609 aa8.5□□□□□ -1.05
XPA-203ENST00000485042 GPR37O15354 613 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms