RNA–Protein interactions for RNA: ENST00000484103.1

NDUFA3-213, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-213ENST00000484103 ZFYVE16Q7Z3T8 1539 aa31.16■■■□□ 2.58
NDUFA3-213ENST00000484103 EFCAB2Q5VUJ9 269 aa31.16■■■□□ 2.58
NDUFA3-213ENST00000484103 BCORL1Q5H9F3 1711 aa31.15■■■□□ 2.58
NDUFA3-213ENST00000484103 PLPPR3Q6T4P5 718 aa31.14■■■□□ 2.58
NDUFA3-213ENST00000484103 POGZQ7Z3K3 1410 aa31.14■■■□□ 2.58
NDUFA3-213ENST00000484103 MADDQ8WXG6 1647 aa31.13■■■□□ 2.57
NDUFA3-213ENST00000484103 PTPRMP28827 1452 aa31.13■■■□□ 2.57
NDUFA3-213ENST00000484103 CCDC18Q5T9S5 1454 aa31.13■■■□□ 2.57
NDUFA3-213ENST00000484103 ZMYM4Q5VZL5 1548 aa31.13■■■□□ 2.57
NDUFA3-213ENST00000484103 MLECQ14165 292 aa31.09■■■□□ 2.57
NDUFA3-213ENST00000484103 MYT1LQ9UL68 1186 aa31.08■■■□□ 2.57
NDUFA3-213ENST00000484103 FYCO1Q9BQS8 1478 aa31.08■■■□□ 2.57
NDUFA3-213ENST00000484103 SIGLEC1Q9BZZ2 1709 aa31.07■■■□□ 2.56
NDUFA3-213ENST00000484103 RIMS1Q86UR5 1692 aaKnown RBP31.06■■■□□ 2.56
NDUFA3-213ENST00000484103 CDC42BPBQ9Y5S2 1711 aa31.02■■■□□ 2.56
NDUFA3-213ENST00000484103 AFAP1Q8N556 730 aa31.02■■■□□ 2.56
NDUFA3-213ENST00000484103 MAGI2Q86UL8 1455 aa31.01■■■□□ 2.56
NDUFA3-213ENST00000484103 PREX2Q70Z35 1606 aa30.98■■■□□ 2.55
NDUFA3-213ENST00000484103 ZNF518AQ6AHZ1 1483 aa30.97■■■□□ 2.55
NDUFA3-213ENST00000484103 ZNF777Q9ULD5 760 aaPredicted RBP30.96■■■□□ 2.55
NDUFA3-213ENST00000484103 ATP10AO60312 1499 aa30.94■■■□□ 2.54
NDUFA3-213ENST00000484103 C9orf84Q5VXU9 1444 aa30.92■■■□□ 2.54
NDUFA3-213ENST00000484103 CDC42BPAQ5VT25 1732 aa30.92■■■□□ 2.54
NDUFA3-213ENST00000484103 CEP162Q5TB80 1403 aa30.9■■■□□ 2.54
NDUFA3-213ENST00000484103 ABCC1P33527 1531 aa30.89■■■□□ 2.54
NDUFA3-213ENST00000484103 TRAPPC8Q9Y2L5 1435 aa30.89■■■□□ 2.53
NDUFA3-213ENST00000484103 ARHGEF12Q9NZN5 1544 aa30.88■■■□□ 2.53
NDUFA3-213ENST00000484103 KDM5CP41229 1560 aa30.88■■■□□ 2.53
NDUFA3-213ENST00000484103 FER1L4A9Z1Z3 1794 aa30.87■■■□□ 2.53
NDUFA3-213ENST00000484103 ITSN2Q9NZM3 1697 aa30.86■■■□□ 2.53
NDUFA3-213ENST00000484103 MTUS2Q5JR59 1369 aa30.85■■■□□ 2.53
NDUFA3-213ENST00000484103 DIP2CQ9Y2E4 1556 aa30.83■■■□□ 2.53
NDUFA3-213ENST00000484103 LOC105371045A0A1W2PR82 267 aa30.82■■■□□ 2.52
NDUFA3-213ENST00000484103 ABCA6Q8N139 1617 aa30.82■■■□□ 2.52
NDUFA3-213ENST00000484103 SAMD9LQ8IVG5 1584 aa30.8■■■□□ 2.52
NDUFA3-213ENST00000484103 GPATCH8Q9UKJ3 1502 aaKnown RBP30.8■■■□□ 2.52
NDUFA3-213ENST00000484103 LMTK3Q96Q04 1460 aa30.79■■■□□ 2.52
NDUFA3-213ENST00000484103 ILDR1Q86SU0 546 aaPredicted RBP30.79■■■□□ 2.52
NDUFA3-213ENST00000484103 CCNB3Q8WWL7 1395 aa30.79■■■□□ 2.52
NDUFA3-213ENST00000484103 SYCP2Q9BX26 1530 aa30.78■■■□□ 2.52
NDUFA3-213ENST00000484103 HNRNPMP52272 730 aaKnown RBP eCLIP30.77■■■□□ 2.52
NDUFA3-213ENST00000484103 HSPA2P54652 639 aa30.77■■■□□ 2.52
NDUFA3-213ENST00000484103 CEBPAP49715 358 aaPredicted RBP30.76■■■□□ 2.51
NDUFA3-213ENST00000484103 CFDP1Q9UEE9 299 aaPredicted RBP30.76■■■□□ 2.51
NDUFA3-213ENST00000484103 MLH3Q9UHC1 1453 aa30.76■■■□□ 2.51
NDUFA3-213ENST00000484103 KIDINS220Q9ULH0 1771 aa30.71■■■□□ 2.51
NDUFA3-213ENST00000484103 EHBP1L1Q8N3D4 1523 aa30.69■■■□□ 2.5
NDUFA3-213ENST00000484103 SPAG9O60271 1321 aaKnown RBP30.67■■■□□ 2.5
NDUFA3-213ENST00000484103 TIAM1Q13009 1591 aa30.66■■■□□ 2.5
NDUFA3-213ENST00000484103 ZNF644Q9H582 1327 aaPredicted RBP30.65■■■□□ 2.5
NDUFA3-213ENST00000484103 REREQ9P2R6 1566 aa30.64■■■□□ 2.5
NDUFA3-213ENST00000484103 ESF1Q9H501 851 aaKnown RBP30.63■■■□□ 2.49
NDUFA3-213ENST00000484103 PLEKHH2Q8IVE3 1493 aa30.59■■■□□ 2.49
NDUFA3-213ENST00000484103 ATP7AQ04656 1500 aa30.58■■■□□ 2.49
NDUFA3-213ENST00000484103 SUPT6HQ7KZ85 1726 aaKnown RBP30.57■■■□□ 2.48
NDUFA3-213ENST00000484103 AGLP35573 1532 aa30.57■■■□□ 2.48
NDUFA3-213ENST00000484103 KIAA1107Q9UPP5 1409 aa30.56■■■□□ 2.48
NDUFA3-213ENST00000484103 PREX1Q8TCU6 1659 aa30.54■■■□□ 2.48
NDUFA3-213ENST00000484103 NCOA2Q15596 1464 aa30.53■■■□□ 2.48
NDUFA3-213ENST00000484103 INO80Q9ULG1 1556 aaPredicted RBP30.53■■■□□ 2.48
NDUFA3-213ENST00000484103 C3P01024 1663 aa30.52■■■□□ 2.48
NDUFA3-213ENST00000484103 VPS8Q8N3P4 1428 aa30.52■■■□□ 2.48
NDUFA3-213ENST00000484103 A2MP01023 1474 aa30.47■■■□□ 2.47
NDUFA3-213ENST00000484103 UHRF1BP1Q6BDS2 1440 aa30.47■■■□□ 2.47
NDUFA3-213ENST00000484103 MBD5Q9P267 1494 aa30.44■■■□□ 2.46
NDUFA3-213ENST00000484103 GGT6Q6P531 493 aa30.44■■■□□ 2.46
NDUFA3-213ENST00000484103 CAMSAP2Q08AD1 1489 aa30.44■■■□□ 2.46
NDUFA3-213ENST00000484103 PLXNC1O60486 1568 aa30.41■■■□□ 2.46
NDUFA3-213ENST00000484103 LRRC9Q6ZRR7 1453 aa30.41■■■□□ 2.46
NDUFA3-213ENST00000484103 CNTLNQ9NXG0 1405 aa30.39■■■□□ 2.46
NDUFA3-213ENST00000484103 KANK4Q5T7N3 995 aaPredicted RBP30.39■■■□□ 2.46
NDUFA3-213ENST00000484103 CLTCQ00610 1675 aaKnown RBP30.39■■■□□ 2.45
NDUFA3-213ENST00000484103 ADGBQ8N7X0 1667 aa30.38■■■□□ 2.45
NDUFA3-213ENST00000484103 CCDC141Q6ZP82 1450 aa30.36■■■□□ 2.45
NDUFA3-213ENST00000484103 ZMYM3Q14202 1370 aa30.34■■■□□ 2.45
NDUFA3-213ENST00000484103 FBXO41Q8TF61 875 aa30.34■■■□□ 2.45
NDUFA3-213ENST00000484103 MROH2AA6NES4 1674 aa30.31■■■□□ 2.44
NDUFA3-213ENST00000484103 SETD1BQ9UPS6 1966 aaKnown RBP30.3■■■□□ 2.44
NDUFA3-213ENST00000484103 RTEL1-TNFRSF6BF6WH68 1400 aa30.3■■■□□ 2.44
NDUFA3-213ENST00000484103 STRCQ7RTU9 1775 aa30.29■■■□□ 2.44
NDUFA3-213ENST00000484103 KIF3BO15066 747 aa30.26■■■□□ 2.43
NDUFA3-213ENST00000484103 DHX29Q7Z478 1369 aaKnown RBP30.26■■■□□ 2.43
NDUFA3-213ENST00000484103 TSPY4P0CV99 314 aa30.23■■■□□ 2.43
NDUFA3-213ENST00000484103 TSPY10P0CW01 314 aa30.23■■■□□ 2.43
NDUFA3-213ENST00000484103 APLP2Q06481 763 aa30.23■■■□□ 2.43
NDUFA3-213ENST00000484103 NPATQ14207 1427 aa30.22■■■□□ 2.43
NDUFA3-213ENST00000484103 ARHGEF5Q12774 1597 aa30.21■■■□□ 2.43
NDUFA3-213ENST00000484103 MAP3K1Q13233 1512 aa30.21■■■□□ 2.43
NDUFA3-213ENST00000484103 RSPH4AQ5TD94 716 aa30.2■■■□□ 2.43
NDUFA3-213ENST00000484103 CERKQ8TCT0 537 aa30.2■■■□□ 2.43
NDUFA3-213ENST00000484103 DMRT2Q9Y5R5 561 aa30.19■■■□□ 2.42
NDUFA3-213ENST00000484103 MYOM3Q5VTT5 1437 aa30.19■■■□□ 2.42
NDUFA3-213ENST00000484103 PTPRKQ15262 1439 aa30.18■■■□□ 2.42
NDUFA3-213ENST00000484103 MYO3AQ8NEV4 1616 aa30.17■■■□□ 2.42
NDUFA3-213ENST00000484103 CAMSAP1Q5T5Y3 1602 aa30.16■■■□□ 2.42
NDUFA3-213ENST00000484103 NCOA1Q15788 1441 aa30.13■■■□□ 2.41
NDUFA3-213ENST00000484103 NCKAP5LQ9HCH0 1330 aa30.12■■■□□ 2.41
NDUFA3-213ENST00000484103 PPP6R1Q9UPN7 881 aa30.11■■■□□ 2.41
NDUFA3-213ENST00000484103 WASHC2CQ9Y4E1 1318 aa30.11■■■□□ 2.41
NDUFA3-213ENST00000484103 FBXO31Q5XUX0 539 aaPredicted RBP30.1■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms