RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 HNRNPUQ00839 825 aaKnown RBP eCLIP15.76■□□□□ 0.11
SEC61A1-205ENST00000483956 CNTLNQ9NXG0 1405 aa15.76■□□□□ 0.11
SEC61A1-205ENST00000483956 NESP48681 1621 aa15.75■□□□□ 0.11
SEC61A1-205ENST00000483956 GAPVD1Q14C86 1478 aa15.75■□□□□ 0.11
SEC61A1-205ENST00000483956 ZBTB47Q9UFB7 747 aaPredicted RBP15.75■□□□□ 0.11
SEC61A1-205ENST00000483956 HSPA5P11021 654 aaKnown RBP15.74■□□□□ 0.11
SEC61A1-205ENST00000483956 ANP32AP39687 249 aaKnown RBP15.74■□□□□ 0.11
SEC61A1-205ENST00000483956 C11orf95C9JLR9 678 aaPredicted RBP15.73■□□□□ 0.11
SEC61A1-205ENST00000483956 BRPF3Q9ULD4 1205 aa15.73■□□□□ 0.11
SEC61A1-205ENST00000483956 MIA2Q96PC5 1412 aa15.72■□□□□ 0.11
SEC61A1-205ENST00000483956 KDM6BO15054 1643 aa15.72■□□□□ 0.11
SEC61A1-205ENST00000483956 EIF4G2P78344 907 aaKnown RBP eCLIP15.71■□□□□ 0.11
SEC61A1-205ENST00000483956 NCOA1Q15788 1441 aa15.71■□□□□ 0.11
SEC61A1-205ENST00000483956 POLR1AO95602 1720 aaPredicted RBP15.7■□□□□ 0.1
SEC61A1-205ENST00000483956 TDRD9Q8NDG6 1382 aaKnown RBP15.69■□□□□ 0.1
SEC61A1-205ENST00000483956 WASHC2CQ9Y4E1 1318 aa15.68■□□□□ 0.1
SEC61A1-205ENST00000483956 EPRSP07814 1512 aaKnown RBP15.67■□□□□ 0.1
SEC61A1-205ENST00000483956 RRP7BPQ9NSQ0 103 aa15.67■□□□□ 0.1
SEC61A1-205ENST00000483956 CCDC7Q96M83 1385 aa15.66■□□□□ 0.1
SEC61A1-205ENST00000483956 NEFMP07197 916 aa15.66■□□□□ 0.1
SEC61A1-205ENST00000483956 PLEKHG5O94827 1062 aa15.66■□□□□ 0.1
SEC61A1-205ENST00000483956 TARBP1Q13395 1621 aaKnown RBP15.65■□□□□ 0.1
SEC61A1-205ENST00000483956 RPRD2Q5VT52 1461 aaKnown RBP15.64■□□□□ 0.09
SEC61A1-205ENST00000483956 MPHOSPH9Q99550 1183 aa15.64■□□□□ 0.09
SEC61A1-205ENST00000483956 LAS1LQ9Y4W2 734 aaKnown RBP15.64■□□□□ 0.09
SEC61A1-205ENST00000483956 WDR62O43379 1518 aa15.64■□□□□ 0.09
SEC61A1-205ENST00000483956 IQGAP2Q13576 1575 aa15.64■□□□□ 0.09
SEC61A1-205ENST00000483956 TEX14Q8IWB6 1497 aa15.64■□□□□ 0.09
SEC61A1-205ENST00000483956 ROCK1Q13464 1354 aa15.64■□□□□ 0.09
SEC61A1-205ENST00000483956 PRKRIP1Q9H875 184 aaPredicted RBP15.64■□□□□ 0.09
SEC61A1-205ENST00000483956 ZBED9Q6R2W3 1325 aa15.63■□□□□ 0.09
SEC61A1-205ENST00000483956 L3MBTL2Q969R5 705 aa15.62■□□□□ 0.09
SEC61A1-205ENST00000483956 ANKRD30BQ9BXX2 1392 aa15.61■□□□□ 0.09
SEC61A1-205ENST00000483956 SPATA31E1Q6ZUB1 1445 aa15.61■□□□□ 0.09
SEC61A1-205ENST00000483956 CHIC2Q9UKJ5 165 aa15.61■□□□□ 0.09
SEC61A1-205ENST00000483956 PBRM1Q86U86 1689 aa15.61■□□□□ 0.09
SEC61A1-205ENST00000483956 DNMT1P26358 1616 aaKnown RBP15.6■□□□□ 0.09
SEC61A1-205ENST00000483956 PDS5BQ9NTI5 1447 aa15.6■□□□□ 0.09
SEC61A1-205ENST00000483956 CDK13Q14004 1512 aaKnown RBP15.6■□□□□ 0.09
SEC61A1-205ENST00000483956 CCDC184Q52MB2 194 aa15.6■□□□□ 0.09
SEC61A1-205ENST00000483956 USP35Q9P2H5 1018 aa15.59■□□□□ 0.09
SEC61A1-205ENST00000483956 DAPK1P53355 1430 aa15.58■□□□□ 0.09
SEC61A1-205ENST00000483956 ADAMTS12P58397 1594 aa15.58■□□□□ 0.08
SEC61A1-205ENST00000483956 RSPH6AQ9H0K4 717 aa15.57■□□□□ 0.08
SEC61A1-205ENST00000483956 PODXL2Q9NZ53 605 aa15.56■□□□□ 0.08
SEC61A1-205ENST00000483956 MRS2Q9HD23 443 aa15.56■□□□□ 0.08
SEC61A1-205ENST00000483956 ZMYND15Q9H091 742 aa15.55■□□□□ 0.08
SEC61A1-205ENST00000483956 KIF7Q2M1P5 1343 aa15.54■□□□□ 0.08
SEC61A1-205ENST00000483956 NBPF8Q3BBV2 869 aa15.54■□□□□ 0.08
SEC61A1-205ENST00000483956 NPM2Q86SE8 214 aaKnown RBP15.54■□□□□ 0.08
SEC61A1-205ENST00000483956 ABCC5O15440 1437 aa15.53■□□□□ 0.08
SEC61A1-205ENST00000483956 VSIG10Q8N0Z9 540 aa15.52■□□□□ 0.08
SEC61A1-205ENST00000483956 MBD5Q9P267 1494 aa15.52■□□□□ 0.08
SEC61A1-205ENST00000483956 FAM9BQ8IZU0 186 aa15.52■□□□□ 0.07
SEC61A1-205ENST00000483956 SMG6Q86US8 1419 aaKnown RBP15.51■□□□□ 0.07
SEC61A1-205ENST00000483956 GSE1Q14687 1217 aa15.51■□□□□ 0.07
SEC61A1-205ENST00000483956 FOXD1Q16676 465 aa15.51■□□□□ 0.07
SEC61A1-205ENST00000483956 GLIPR1L2Q4G1C9 344 aa15.5■□□□□ 0.07
SEC61A1-205ENST00000483956 DHX29Q7Z478 1369 aaKnown RBP15.48■□□□□ 0.07
SEC61A1-205ENST00000483956 PZPP20742 1482 aa15.48■□□□□ 0.07
SEC61A1-205ENST00000483956 ADGBQ8N7X0 1667 aa15.48■□□□□ 0.07
SEC61A1-205ENST00000483956 KIAA0556O60303 1618 aa15.47■□□□□ 0.07
SEC61A1-205ENST00000483956 KIF14Q15058 1648 aa15.47■□□□□ 0.07
SEC61A1-205ENST00000483956 RNF123Q5XPI4 1314 aa15.46■□□□□ 0.07
SEC61A1-205ENST00000483956 PPM1GO15355 546 aaPredicted RBP15.46■□□□□ 0.07
SEC61A1-205ENST00000483956 NUP153P49790 1475 aaKnown RBP15.46■□□□□ 0.06
SEC61A1-205ENST00000483956 ARID4BQ4LE39 1312 aaPredicted RBP15.45■□□□□ 0.06
SEC61A1-205ENST00000483956 SLC4A1APQ9BWU0 796 aaKnown RBP15.45■□□□□ 0.06
SEC61A1-205ENST00000483956 RAPGEF6Q8TEU7 1601 aa15.45■□□□□ 0.06
SEC61A1-205ENST00000483956 BCORL1Q5H9F3 1711 aa15.45■□□□□ 0.06
SEC61A1-205ENST00000483956 FRAT1Q92837 279 aaPredicted RBP15.44■□□□□ 0.06
SEC61A1-205ENST00000483956 ITSN2Q9NZM3 1697 aa15.44■□□□□ 0.06
SEC61A1-205ENST00000483956 KDM5CP41229 1560 aa15.44■□□□□ 0.06
SEC61A1-205ENST00000483956 DISP1Q96F81 1524 aa15.43■□□□□ 0.06
SEC61A1-205ENST00000483956 ADGRL2O95490 1459 aa15.43■□□□□ 0.06
SEC61A1-205ENST00000483956 CROCC2H7BZ55 1655 aa15.43■□□□□ 0.06
SEC61A1-205ENST00000483956 SLC24A1O60721 1099 aa15.43■□□□□ 0.06
SEC61A1-205ENST00000483956 FAM43AQ8N2R8 423 aa15.42■□□□□ 0.06
SEC61A1-205ENST00000483956 KIAA1107Q9UPP5 1409 aa15.42■□□□□ 0.06
SEC61A1-205ENST00000483956 KIAA0586Q9BVV6 1533 aa15.42■□□□□ 0.06
SEC61A1-205ENST00000483956 NUDCQ9Y266 331 aa15.41■□□□□ 0.06
SEC61A1-205ENST00000483956 CAMSAP2Q08AD1 1489 aa15.41■□□□□ 0.06
SEC61A1-205ENST00000483956 USP47Q96K76 1375 aa15.41■□□□□ 0.06
SEC61A1-205ENST00000483956 ADCY10Q96PN6 1610 aa15.4■□□□□ 0.06
SEC61A1-205ENST00000483956 ZNF644Q9H582 1327 aaPredicted RBP15.4■□□□□ 0.06
SEC61A1-205ENST00000483956 ROCK2O75116 1388 aaKnown RBP15.39■□□□□ 0.05
SEC61A1-205ENST00000483956 UHRF1BP1Q6BDS2 1440 aa15.39■□□□□ 0.05
SEC61A1-205ENST00000483956 TROQ12816 1431 aaPredicted RBP15.38■□□□□ 0.05
SEC61A1-205ENST00000483956 RALGAPBQ86X10 1494 aa15.38■□□□□ 0.05
SEC61A1-205ENST00000483956 ARHGEF12Q9NZN5 1544 aa15.36■□□□□ 0.05
SEC61A1-205ENST00000483956 MRC2Q9UBG0 1479 aa15.36■□□□□ 0.05
SEC61A1-205ENST00000483956 NFKBIBQ15653 356 aa15.36■□□□□ 0.05
SEC61A1-205ENST00000483956 ARID3CA6NKF2 412 aa15.35■□□□□ 0.05
SEC61A1-205ENST00000483956 DCAF11Q8TEB1 546 aa15.35■□□□□ 0.05
SEC61A1-205ENST00000483956 GPATCH8Q9UKJ3 1502 aaKnown RBP15.34■□□□□ 0.05
SEC61A1-205ENST00000483956 KTN1Q86UP2 1357 aaKnown RBP15.33■□□□□ 0.05
SEC61A1-205ENST00000483956 IFT140Q96RY7 1462 aa15.33■□□□□ 0.04
SEC61A1-205ENST00000483956 PNISRQ8TF01 805 aaKnown RBP15.33■□□□□ 0.04
SEC61A1-205ENST00000483956 LRPPRCP42704 1394 aaKnown RBP15.32■□□□□ 0.04
SEC61A1-205ENST00000483956 E9PCH4 1651 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms