RNA–Protein interactions for RNA: ENST00000482910.1

COL16A1-213, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-213ENST00000482910 ARHGAP5Q13017 1502 aa24.05■■□□□ 1.44
COL16A1-213ENST00000482910 MTUS2Q5JR59 1369 aa24.05■■□□□ 1.44
COL16A1-213ENST00000482910 EHBP1L1Q8N3D4 1523 aa24.05■■□□□ 1.44
COL16A1-213ENST00000482910 CDC42BPAQ5VT25 1732 aa24.03■■□□□ 1.44
COL16A1-213ENST00000482910 ZMYM4Q5VZL5 1548 aa24.03■■□□□ 1.44
COL16A1-213ENST00000482910 SCAPERQ9BY12 1400 aa24.02■■□□□ 1.44
COL16A1-213ENST00000482910 POGZQ7Z3K3 1410 aa24.01■■□□□ 1.43
COL16A1-213ENST00000482910 TIAM1Q13009 1591 aa23.99■■□□□ 1.43
COL16A1-213ENST00000482910 MAGI2Q86UL8 1455 aa23.99■■□□□ 1.43
COL16A1-213ENST00000482910 MAP3K1Q13233 1512 aa23.99■■□□□ 1.43
COL16A1-213ENST00000482910 GPATCH8Q9UKJ3 1502 aaKnown RBP23.98■■□□□ 1.43
COL16A1-213ENST00000482910 KDM4FA0A1W2PPD8 638 aa23.97■■□□□ 1.43
COL16A1-213ENST00000482910 ARHGEF40Q8TER5 1519 aa23.96■■□□□ 1.43
COL16A1-213ENST00000482910 ABCC1P33527 1531 aa23.94■■□□□ 1.42
COL16A1-213ENST00000482910 ZNF518AQ6AHZ1 1483 aa23.94■■□□□ 1.42
COL16A1-213ENST00000482910 CCNB3Q8WWL7 1395 aa23.93■■□□□ 1.42
COL16A1-213ENST00000482910 KDM5CP41229 1560 aa23.91■■□□□ 1.42
COL16A1-213ENST00000482910 SUPT6HQ7KZ85 1726 aaKnown RBP23.91■■□□□ 1.42
COL16A1-213ENST00000482910 ZFYVE16Q7Z3T8 1539 aa23.9■■□□□ 1.42
COL16A1-213ENST00000482910 ITSN2Q9NZM3 1697 aa23.9■■□□□ 1.42
COL16A1-213ENST00000482910 LRRC9Q6ZRR7 1453 aa23.89■■□□□ 1.42
COL16A1-213ENST00000482910 SAMD9LQ8IVG5 1584 aa23.88■■□□□ 1.41
COL16A1-213ENST00000482910 PLEKHH2Q8IVE3 1493 aa23.87■■□□□ 1.41
COL16A1-213ENST00000482910 CFDP1Q9UEE9 299 aaPredicted RBP23.87■■□□□ 1.41
COL16A1-213ENST00000482910 ARHGEF12Q9NZN5 1544 aa23.87■■□□□ 1.41
COL16A1-213ENST00000482910 NCOA2Q15596 1464 aa23.87■■□□□ 1.41
COL16A1-213ENST00000482910 YEATS2Q9ULM3 1422 aa23.86■■□□□ 1.41
COL16A1-213ENST00000482910 KIAA1107Q9UPP5 1409 aa23.85■■□□□ 1.41
COL16A1-213ENST00000482910 AFAP1Q8N556 730 aa23.84■■□□□ 1.41
COL16A1-213ENST00000482910 TRAPPC8Q9Y2L5 1435 aa23.84■■□□□ 1.41
COL16A1-213ENST00000482910 HECW2Q9P2P5 1572 aa23.83■■□□□ 1.41
COL16A1-213ENST00000482910 MLH3Q9UHC1 1453 aa23.83■■□□□ 1.41
COL16A1-213ENST00000482910 SYCP2Q9BX26 1530 aa23.81■■□□□ 1.4
COL16A1-213ENST00000482910 ZNF777Q9ULD5 760 aaPredicted RBP23.81■■□□□ 1.4
COL16A1-213ENST00000482910 ATP10AO60312 1499 aa23.81■■□□□ 1.4
COL16A1-213ENST00000482910 BCORL1Q5H9F3 1711 aa23.79■■□□□ 1.4
COL16A1-213ENST00000482910 APLP2Q06481 763 aa23.78■■□□□ 1.4
COL16A1-213ENST00000482910 ADAMTSL3P82987 1691 aa23.78■■□□□ 1.4
COL16A1-213ENST00000482910 C9orf84Q5VXU9 1444 aa23.77■■□□□ 1.4
COL16A1-213ENST00000482910 KANK4Q5T7N3 995 aaPredicted RBP23.77■■□□□ 1.4
COL16A1-213ENST00000482910 REREQ9P2R6 1566 aa23.76■■□□□ 1.39
COL16A1-213ENST00000482910 DIP2CQ9Y2E4 1556 aa23.75■■□□□ 1.39
COL16A1-213ENST00000482910 ARID4BQ4LE39 1312 aaPredicted RBP23.75■■□□□ 1.39
COL16A1-213ENST00000482910 KIDINS220Q9ULH0 1771 aa23.74■■□□□ 1.39
COL16A1-213ENST00000482910 SIGLEC1Q9BZZ2 1709 aa23.73■■□□□ 1.39
COL16A1-213ENST00000482910 HNRNPMP52272 730 aaKnown RBP eCLIP23.73■■□□□ 1.39
COL16A1-213ENST00000482910 ABCA6Q8N139 1617 aa23.73■■□□□ 1.39
COL16A1-213ENST00000482910 MBD5Q9P267 1494 aa23.72■■□□□ 1.39
COL16A1-213ENST00000482910 ZNF644Q9H582 1327 aaPredicted RBP23.7■■□□□ 1.38
COL16A1-213ENST00000482910 MYT1LQ9UL68 1186 aa23.7■■□□□ 1.38
COL16A1-213ENST00000482910 CAMSAP2Q08AD1 1489 aa23.69■■□□□ 1.38
COL16A1-213ENST00000482910 SPAG9O60271 1321 aaKnown RBP23.69■■□□□ 1.38
COL16A1-213ENST00000482910 MIA2Q96PC5 1412 aa23.68■■□□□ 1.38
COL16A1-213ENST00000482910 INO80Q9ULG1 1556 aaPredicted RBP23.68■■□□□ 1.38
COL16A1-213ENST00000482910 MYOM3Q5VTT5 1437 aa23.67■■□□□ 1.38
COL16A1-213ENST00000482910 RSPH4AQ5TD94 716 aa23.67■■□□□ 1.38
COL16A1-213ENST00000482910 ATP7AQ04656 1500 aa23.67■■□□□ 1.38
COL16A1-213ENST00000482910 MADDQ8WXG6 1647 aa23.66■■□□□ 1.38
COL16A1-213ENST00000482910 AGLP35573 1532 aa23.66■■□□□ 1.38
COL16A1-213ENST00000482910 ILDR1Q86SU0 546 aaPredicted RBP23.65■■□□□ 1.38
COL16A1-213ENST00000482910 RTEL1-TNFRSF6BF6WH68 1400 aa23.64■■□□□ 1.37
COL16A1-213ENST00000482910 ARHGEF5Q12774 1597 aa23.64■■□□□ 1.37
COL16A1-213ENST00000482910 PTPRMP28827 1452 aa23.63■■□□□ 1.37
COL16A1-213ENST00000482910 CCDC141Q6ZP82 1450 aa23.63■■□□□ 1.37
COL16A1-213ENST00000482910 RIMS1Q86UR5 1692 aaKnown RBP23.59■■□□□ 1.37
COL16A1-213ENST00000482910 FER1L4A9Z1Z3 1794 aa23.59■■□□□ 1.37
COL16A1-213ENST00000482910 ADGBQ8N7X0 1667 aa23.57■■□□□ 1.36
COL16A1-213ENST00000482910 PLXNC1O60486 1568 aa23.57■■□□□ 1.36
COL16A1-213ENST00000482910 MLECQ14165 292 aa23.56■■□□□ 1.36
COL16A1-213ENST00000482910 A2MP01023 1474 aa23.56■■□□□ 1.36
COL16A1-213ENST00000482910 PTPN23Q9H3S7 1636 aa23.52■■□□□ 1.36
COL16A1-213ENST00000482910 FGD6Q6ZV73 1430 aa23.52■■□□□ 1.36
COL16A1-213ENST00000482910 MAST1Q9Y2H9 1570 aa23.52■■□□□ 1.36
COL16A1-213ENST00000482910 TSPY4P0CV99 314 aa23.51■■□□□ 1.35
COL16A1-213ENST00000482910 TSPY10P0CW01 314 aa23.51■■□□□ 1.35
COL16A1-213ENST00000482910 TCOF1Q13428 1488 aaKnown RBP23.5■■□□□ 1.35
COL16A1-213ENST00000482910 DHX29Q7Z478 1369 aaKnown RBP23.48■■□□□ 1.35
COL16A1-213ENST00000482910 CNTLNQ9NXG0 1405 aa23.46■■□□□ 1.35
COL16A1-213ENST00000482910 SHANK2Q9UPX8 1470 aa23.44■■□□□ 1.34
COL16A1-213ENST00000482910 CROCC2H7BZ55 1655 aa23.43■■□□□ 1.34
COL16A1-213ENST00000482910 DNMT1P26358 1616 aaKnown RBP23.42■■□□□ 1.34
COL16A1-213ENST00000482910 PPP6R1Q9UPN7 881 aa23.42■■□□□ 1.34
COL16A1-213ENST00000482910 ABCC5O15440 1437 aa23.42■■□□□ 1.34
COL16A1-213ENST00000482910 ESF1Q9H501 851 aaKnown RBP23.41■■□□□ 1.34
COL16A1-213ENST00000482910 MROH2AA6NES4 1674 aa23.4■■□□□ 1.34
COL16A1-213ENST00000482910 DAPK1P53355 1430 aa23.39■■□□□ 1.33
COL16A1-213ENST00000482910 SETD1BQ9UPS6 1966 aaKnown RBP23.37■■□□□ 1.33
COL16A1-213ENST00000482910 C3P01024 1663 aa23.37■■□□□ 1.33
COL16A1-213ENST00000482910 FAM135AQ9P2D6 1515 aa23.37■■□□□ 1.33
COL16A1-213ENST00000482910 EIF2AK4Q9P2K8 1649 aaKnown RBP23.34■■□□□ 1.33
COL16A1-213ENST00000482910 GGT6Q6P531 493 aa23.34■■□□□ 1.33
COL16A1-213ENST00000482910 LMTK3Q96Q04 1460 aa23.34■■□□□ 1.33
COL16A1-213ENST00000482910 DUOX2Q9NRD8 1548 aa23.33■■□□□ 1.33
COL16A1-213ENST00000482910 KIF3BO15066 747 aa23.33■■□□□ 1.33
COL16A1-213ENST00000482910 CEBPAP49715 358 aaPredicted RBP23.32■■□□□ 1.32
COL16A1-213ENST00000482910 CLTCQ00610 1675 aaKnown RBP23.32■■□□□ 1.32
COL16A1-213ENST00000482910 PREX1Q8TCU6 1659 aa23.31■■□□□ 1.32
COL16A1-213ENST00000482910 RNF17Q9BXT8 1623 aaKnown RBP23.3■■□□□ 1.32
COL16A1-213ENST00000482910 ZMYM3Q14202 1370 aa23.3■■□□□ 1.32
COL16A1-213ENST00000482910 PLPPR3Q6T4P5 718 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms