RNA–Protein interactions for RNA: ENST00000482687.5

APTX-225, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-225ENST00000482687 GTF3C3Q9Y5Q9 886 aa15.37■□□□□ 0.05
APTX-225ENST00000482687 RIMBP3CA6NJZ7 1639 aa15.36■□□□□ 0.05
APTX-225ENST00000482687 RIMBP3BA6NNM3 1639 aa15.36■□□□□ 0.05
APTX-225ENST00000482687 RIMBP3Q9UFD9 1639 aa15.36■□□□□ 0.05
APTX-225ENST00000482687 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.36■□□□□ 0.05
APTX-225ENST00000482687 RAB3GAP2Q9H2M9 1393 aa15.35■□□□□ 0.05
APTX-225ENST00000482687 CAMSAP2Q08AD1 1489 aa15.35■□□□□ 0.05
APTX-225ENST00000482687 SETD5Q9C0A6 1442 aa15.35■□□□□ 0.05
APTX-225ENST00000482687 CDC42BPBQ9Y5S2 1711 aa15.35■□□□□ 0.05
APTX-225ENST00000482687 PREX2Q70Z35 1606 aa15.32■□□□□ 0.04
APTX-225ENST00000482687 CYB5RLQ6IPT4 315 aa15.32■□□□□ 0.04
APTX-225ENST00000482687 RRP7BPQ9NSQ0 103 aa15.32■□□□□ 0.04
APTX-225ENST00000482687 MYO5CQ9NQX4 1742 aa15.32■□□□□ 0.04
APTX-225ENST00000482687 DNMT1P26358 1616 aaKnown RBP15.31■□□□□ 0.04
APTX-225ENST00000482687 DAPK1P53355 1430 aa15.31■□□□□ 0.04
APTX-225ENST00000482687 ABCC5O15440 1437 aa15.3■□□□□ 0.04
APTX-225ENST00000482687 NPM1P06748 294 aaKnown RBP eCLIP15.3■□□□□ 0.04
APTX-225ENST00000482687 ASXL2Q76L83 1435 aa15.29■□□□□ 0.04
APTX-225ENST00000482687 WDR7Q9Y4E6 1490 aa15.29■□□□□ 0.04
APTX-225ENST00000482687 DHX57Q6P158 1386 aaKnown RBP15.28■□□□□ 0.04
APTX-225ENST00000482687 ARHGAP5Q13017 1502 aa15.28■□□□□ 0.04
APTX-225ENST00000482687 SAMD9LQ8IVG5 1584 aa15.28■□□□□ 0.04
APTX-225ENST00000482687 HNRNPMP52272 730 aaKnown RBP eCLIP15.27■□□□□ 0.03
APTX-225ENST00000482687 NAIPQ13075 1403 aa15.27■□□□□ 0.03
APTX-225ENST00000482687 CROCC2H7BZ55 1655 aa15.26■□□□□ 0.03
APTX-225ENST00000482687 GCC2Q8IWJ2 1684 aa15.25■□□□□ 0.03
APTX-225ENST00000482687 KDM6BO15054 1643 aa15.25■□□□□ 0.03
APTX-225ENST00000482687 HFM1A2PYH4 1435 aa15.25■□□□□ 0.03
APTX-225ENST00000482687 ADGBQ8N7X0 1667 aa15.23■□□□□ 0.03
APTX-225ENST00000482687 AKNAQ7Z591 1439 aa15.22■□□□□ 0.03
APTX-225ENST00000482687 SYCP2Q9BX26 1530 aa15.21■□□□□ 0.03
APTX-225ENST00000482687 PLCH2O75038 1416 aa15.21■□□□□ 0.03
APTX-225ENST00000482687 ABCA9Q8IUA7 1624 aa15.2■□□□□ 0.02
APTX-225ENST00000482687 MBD5Q9P267 1494 aa15.19■□□□□ 0.02
APTX-225ENST00000482687 ARHGEF5Q12774 1597 aa15.18■□□□□ 0.02
APTX-225ENST00000482687 EFCAB2Q5VUJ9 269 aa15.18■□□□□ 0.02
APTX-225ENST00000482687 ARHGEF12Q9NZN5 1544 aa15.17■□□□□ 0.02
APTX-225ENST00000482687 ROCK1Q13464 1354 aa15.17■□□□□ 0.02
APTX-225ENST00000482687 C9orf84Q5VXU9 1444 aa15.17■□□□□ 0.02
APTX-225ENST00000482687 TSPY4P0CV99 314 aa15.16■□□□□ 0.02
APTX-225ENST00000482687 TSPY10P0CW01 314 aa15.16■□□□□ 0.02
APTX-225ENST00000482687 TRIM52Q96A61 297 aa15.16■□□□□ 0.02
APTX-225ENST00000482687 MAPKBP1O60336 1514 aa15.16■□□□□ 0.02
APTX-225ENST00000482687 CCDC141Q6ZP82 1450 aa15.15■□□□□ 0.02
APTX-225ENST00000482687 NCOA1Q15788 1441 aa15.15■□□□□ 0.02
APTX-225ENST00000482687 ABCC1P33527 1531 aa15.14■□□□□ 0.01
APTX-225ENST00000482687 ADGRL2O95490 1459 aa15.14■□□□□ 0.01
APTX-225ENST00000482687 ANKRD30AQ9BXX3 1397 aa15.13■□□□□ 0.01
APTX-225ENST00000482687 SHANK2Q9UPX8 1470 aa15.13■□□□□ 0.01
APTX-225ENST00000482687 FANCAO15360 1455 aa15.12■□□□□ 0.01
APTX-225ENST00000482687 PLEKHH2Q8IVE3 1493 aa15.12■□□□□ 0.01
APTX-225ENST00000482687 DIEXFQ68CQ4 756 aaKnown RBP15.12■□□□□ 0.01
APTX-225ENST00000482687 TRAPPC8Q9Y2L5 1435 aa15.11■□□□□ 0.01
APTX-225ENST00000482687 ARAP3Q8WWN8 1544 aa15.11■□□□□ 0.01
APTX-225ENST00000482687 KIAA1107Q9UPP5 1409 aa15.11■□□□□ 0.01
APTX-225ENST00000482687 CD109Q6YHK3 1445 aa15.1■□□□□ 0.01
APTX-225ENST00000482687 SIN3AQ96ST3 1273 aa15.1■□□□□ 0.01
APTX-225ENST00000482687 RSPH4AQ5TD94 716 aa15.09■□□□□ 0.01
APTX-225ENST00000482687 CLSPNQ9HAW4 1339 aa15.09■□□□□ 0.01
APTX-225ENST00000482687 KIF15Q9NS87 1388 aa15.08■□□□□ 0.01
APTX-225ENST00000482687 AFAP1Q8N556 730 aa15.08■□□□□ 0.01
APTX-225ENST00000482687 MAST1Q9Y2H9 1570 aa15.08■□□□□ 0
APTX-225ENST00000482687 DNAJC5Q9H3Z4 198 aa15.08■□□□□ 0
APTX-225ENST00000482687 ADGRL1O94910 1474 aa15.07■□□□□ 0
APTX-225ENST00000482687 ANKRD50Q9ULJ7 1429 aa15.06■□□□□ 0
APTX-225ENST00000482687 SCAPERQ9BY12 1400 aa15.06■□□□□ 0
APTX-225ENST00000482687 FOXD1Q16676 465 aa15.05■□□□□ -0
APTX-225ENST00000482687 MPHOSPH9Q99550 1183 aa15.05■□□□□ -0
APTX-225ENST00000482687 TSPOAP1O95153 1857 aa15.05■□□□□ -0
APTX-225ENST00000482687 DENND4BO75064 1496 aaPredicted RBP15.04■□□□□ -0
APTX-225ENST00000482687 MAP3K4Q9Y6R4 1608 aa15.04■□□□□ -0
APTX-225ENST00000482687 FAM69CQ0P6D2 419 aa15.03■□□□□ -0
APTX-225ENST00000482687 MYT1LQ9UL68 1186 aa15.03■□□□□ -0
APTX-225ENST00000482687 SPAG9O60271 1321 aaKnown RBP15.03■□□□□ -0
APTX-225ENST00000482687 DIP2BQ9P265 1576 aa15.03■□□□□ -0
APTX-225ENST00000482687 PLXNC1O60486 1568 aa15.02■□□□□ -0
APTX-225ENST00000482687 CFAP74Q9C0B2 1584 aa15.02■□□□□ -0
APTX-225ENST00000482687 SLC4A1APQ9BWU0 796 aaKnown RBP15□□□□□ -0.01
APTX-225ENST00000482687 BCL11AQ9H165 835 aa15□□□□□ -0.01
APTX-225ENST00000482687 PZPP20742 1482 aa15□□□□□ -0.01
APTX-225ENST00000482687 GLI2P10070 1586 aa15□□□□□ -0.01
APTX-225ENST00000482687 ZFYVE16Q7Z3T8 1539 aa15□□□□□ -0.01
APTX-225ENST00000482687 NUP155O75694 1391 aa14.98□□□□□ -0.01
APTX-225ENST00000482687 ATP7AQ04656 1500 aa14.97□□□□□ -0.01
APTX-225ENST00000482687 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.97□□□□□ -0.01
APTX-225ENST00000482687 INO80Q9ULG1 1556 aaPredicted RBP14.97□□□□□ -0.01
APTX-225ENST00000482687 KIF13AQ9H1H9 1805 aa14.97□□□□□ -0.01
APTX-225ENST00000482687 DUOX2Q9NRD8 1548 aa14.97□□□□□ -0.01
APTX-225ENST00000482687 RAPGEF3O95398 923 aa14.95□□□□□ -0.02
APTX-225ENST00000482687 KIDINS220Q9ULH0 1771 aa14.95□□□□□ -0.02
APTX-225ENST00000482687 RTEL1-TNFRSF6BF6WH68 1400 aa14.95□□□□□ -0.02
APTX-225ENST00000482687 PPRC1Q5VV67 1664 aaKnown RBP14.95□□□□□ -0.02
APTX-225ENST00000482687 NEO1Q92859 1461 aa14.95□□□□□ -0.02
APTX-225ENST00000482687 POGZQ7Z3K3 1410 aa14.94□□□□□ -0.02
APTX-225ENST00000482687 PKD2Q13563 968 aa14.93□□□□□ -0.02
APTX-225ENST00000482687 ZNF518AQ6AHZ1 1483 aa14.93□□□□□ -0.02
APTX-225ENST00000482687 UNC13BO14795 1591 aa14.92□□□□□ -0.02
APTX-225ENST00000482687 KDM5DQ9BY66 1539 aa14.91□□□□□ -0.02
APTX-225ENST00000482687 ERBINQ96RT1 1412 aa14.91□□□□□ -0.02
APTX-225ENST00000482687 RICTORQ6R327 1708 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms