RNA–Protein interactions for RNA: ENST00000482287.5

KPNA1-207, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 3

Gene KPNA1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-207ENST00000482287 MAP3K4Q9Y6R4 1608 aa9.64□□□□□ -0.87
KPNA1-207ENST00000482287 EPRSP07814 1512 aaKnown RBP9.63□□□□□ -0.87
KPNA1-207ENST00000482287 WDR7Q9Y4E6 1490 aa9.63□□□□□ -0.87
KPNA1-207ENST00000482287 ABCC10Q5T3U5 1492 aa9.62□□□□□ -0.87
KPNA1-207ENST00000482287 UBTFP17480 764 aaKnown RBP9.62□□□□□ -0.87
KPNA1-207ENST00000482287 ABCA9Q8IUA7 1624 aa9.62□□□□□ -0.87
KPNA1-207ENST00000482287 VPS8Q8N3P4 1428 aa9.62□□□□□ -0.87
KPNA1-207ENST00000482287 MAP3K1Q13233 1512 aa9.61□□□□□ -0.87
KPNA1-207ENST00000482287 ATP10BO94823 1461 aa9.61□□□□□ -0.87
KPNA1-207ENST00000482287 ATXN8OSP0DMR3 200 aa9.61□□□□□ -0.87
KPNA1-207ENST00000482287 PIP4P2Q8N4L2 257 aa9.61□□□□□ -0.87
KPNA1-207ENST00000482287 SP7Q8TDD2 431 aaPredicted RBP9.61□□□□□ -0.87
KPNA1-207ENST00000482287 CYB5RLQ6IPT4 315 aa9.6□□□□□ -0.87
KPNA1-207ENST00000482287 PPRC1Q5VV67 1664 aaKnown RBP9.6□□□□□ -0.87
KPNA1-207ENST00000482287 CDK13Q14004 1512 aaKnown RBP9.6□□□□□ -0.87
KPNA1-207ENST00000482287 ASXL2Q76L83 1435 aa9.59□□□□□ -0.87
KPNA1-207ENST00000482287 TIAM1Q13009 1591 aa9.58□□□□□ -0.88
KPNA1-207ENST00000482287 ARAP3Q8WWN8 1544 aa9.58□□□□□ -0.88
KPNA1-207ENST00000482287 KIF14Q15058 1648 aa9.58□□□□□ -0.88
KPNA1-207ENST00000482287 ZBTB22O15209 634 aa9.58□□□□□ -0.88
KPNA1-207ENST00000482287 MAGI3Q5TCQ9 1506 aa9.57□□□□□ -0.88
KPNA1-207ENST00000482287 EHBP1L1Q8N3D4 1523 aa9.57□□□□□ -0.88
KPNA1-207ENST00000482287 TTC37Q6PGP7 1564 aa9.56□□□□□ -0.88
KPNA1-207ENST00000482287 HAX1O00165 279 aa9.55□□□□□ -0.88
KPNA1-207ENST00000482287 PITPNM1O00562 1244 aa9.55□□□□□ -0.88
KPNA1-207ENST00000482287 PREX2Q70Z35 1606 aa9.55□□□□□ -0.88
KPNA1-207ENST00000482287 CFAP74Q9C0B2 1584 aa9.54□□□□□ -0.88
KPNA1-207ENST00000482287 TROQ12816 1431 aaPredicted RBP9.54□□□□□ -0.88
KPNA1-207ENST00000482287 MYO5CQ9NQX4 1742 aa9.53□□□□□ -0.88
KPNA1-207ENST00000482287 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.53□□□□□ -0.88
KPNA1-207ENST00000482287 FXR2P51116 673 aaKnown RBP eCLIP9.53□□□□□ -0.88
KPNA1-207ENST00000482287 ITSN2Q9NZM3 1697 aa9.52□□□□□ -0.89
KPNA1-207ENST00000482287 MYT1Q01538 1121 aa9.52□□□□□ -0.89
KPNA1-207ENST00000482287 ARXQ96QS3 562 aa9.52□□□□□ -0.89
KPNA1-207ENST00000482287 CDC42BPAQ5VT25 1732 aa9.51□□□□□ -0.89
KPNA1-207ENST00000482287 LOC105371045A0A1W2PR82 267 aa9.5□□□□□ -0.89
KPNA1-207ENST00000482287 SPDYE2BA6NHP3 402 aa9.5□□□□□ -0.89
KPNA1-207ENST00000482287 SPDYE6P0CI01 402 aa9.5□□□□□ -0.89
KPNA1-207ENST00000482287 SPDYE2Q495Y8 402 aa9.5□□□□□ -0.89
KPNA1-207ENST00000482287 SUPT6HQ7KZ85 1726 aaKnown RBP9.5□□□□□ -0.89
KPNA1-207ENST00000482287 TEX14Q8IWB6 1497 aa9.49□□□□□ -0.89
KPNA1-207ENST00000482287 P3H3Q8IVL6 736 aa9.49□□□□□ -0.89
KPNA1-207ENST00000482287 LRRC9Q6ZRR7 1453 aa9.48□□□□□ -0.89
KPNA1-207ENST00000482287 CDC42BPBQ9Y5S2 1711 aa9.48□□□□□ -0.89
KPNA1-207ENST00000482287 PELP1Q8IZL8 1130 aaKnown RBP9.47□□□□□ -0.89
KPNA1-207ENST00000482287 NEO1Q92859 1461 aa9.47□□□□□ -0.89
KPNA1-207ENST00000482287 NPM1P06748 294 aaKnown RBP eCLIP9.46□□□□□ -0.9
KPNA1-207ENST00000482287 FRMPD1Q5SYB0 1578 aa9.46□□□□□ -0.9
KPNA1-207ENST00000482287 RICTORQ6R327 1708 aa9.45□□□□□ -0.9
KPNA1-207ENST00000482287 ABCC1P33527 1531 aa9.45□□□□□ -0.9
KPNA1-207ENST00000482287 ZMYM4Q5VZL5 1548 aa9.45□□□□□ -0.9
KPNA1-207ENST00000482287 KDM5CP41229 1560 aa9.44□□□□□ -0.9
KPNA1-207ENST00000482287 KDM6BO15054 1643 aa9.43□□□□□ -0.9
KPNA1-207ENST00000482287 RANGAP1P46060 587 aaPredicted RBP9.43□□□□□ -0.9
KPNA1-207ENST00000482287 TSPOAP1O95153 1857 aa9.42□□□□□ -0.9
KPNA1-207ENST00000482287 SAMD9LQ8IVG5 1584 aa9.42□□□□□ -0.9
KPNA1-207ENST00000482287 NCOA2Q15596 1464 aa9.42□□□□□ -0.9
KPNA1-207ENST00000482287 PLCH2O75038 1416 aa9.42□□□□□ -0.9
KPNA1-207ENST00000482287 CD109Q6YHK3 1445 aa9.42□□□□□ -0.9
KPNA1-207ENST00000482287 PHLDB1Q86UU1 1377 aa9.42□□□□□ -0.9
KPNA1-207ENST00000482287 FANCAO15360 1455 aa9.41□□□□□ -0.9
KPNA1-207ENST00000482287 CDK11AQ9UQ88 783 aaPredicted RBP9.41□□□□□ -0.9
KPNA1-207ENST00000482287 GPATCH8Q9UKJ3 1502 aaKnown RBP9.41□□□□□ -0.9
KPNA1-207ENST00000482287 MTUS2Q5JR59 1369 aa9.4□□□□□ -0.9
KPNA1-207ENST00000482287 CROCC2H7BZ55 1655 aa9.4□□□□□ -0.9
KPNA1-207ENST00000482287 SPDYE1Q8NFV5 336 aaPredicted RBP9.4□□□□□ -0.9
KPNA1-207ENST00000482287 ARHGEF40Q8TER5 1519 aa9.4□□□□□ -0.91
KPNA1-207ENST00000482287 INO80Q9ULG1 1556 aaPredicted RBP9.39□□□□□ -0.91
KPNA1-207ENST00000482287 CLEC11AQ9Y240 323 aa9.39□□□□□ -0.91
KPNA1-207ENST00000482287 ARHGAP5Q13017 1502 aa9.39□□□□□ -0.91
KPNA1-207ENST00000482287 ARHGEF5Q12774 1597 aa9.38□□□□□ -0.91
KPNA1-207ENST00000482287 PLEKHD1A6NEE1 506 aa9.38□□□□□ -0.91
KPNA1-207ENST00000482287 ZNF692Q9BU19 519 aaPredicted RBP9.38□□□□□ -0.91
KPNA1-207ENST00000482287 POGZQ7Z3K3 1410 aa9.38□□□□□ -0.91
KPNA1-207ENST00000482287 MIA2Q96PC5 1412 aa9.38□□□□□ -0.91
KPNA1-207ENST00000482287 REREQ9P2R6 1566 aa9.37□□□□□ -0.91
KPNA1-207ENST00000482287 TCOF1Q13428 1488 aaKnown RBP9.37□□□□□ -0.91
KPNA1-207ENST00000482287 PLEKHH2Q8IVE3 1493 aa9.37□□□□□ -0.91
KPNA1-207ENST00000482287 FAM69CQ0P6D2 419 aa9.37□□□□□ -0.91
KPNA1-207ENST00000482287 MYOM3Q5VTT5 1437 aa9.37□□□□□ -0.91
KPNA1-207ENST00000482287 HECW2Q9P2P5 1572 aa9.37□□□□□ -0.91
KPNA1-207ENST00000482287 ADGRL1O94910 1474 aa9.36□□□□□ -0.91
KPNA1-207ENST00000482287 ZNF518AQ6AHZ1 1483 aa9.36□□□□□ -0.91
KPNA1-207ENST00000482287 KIAA1107Q9UPP5 1409 aa9.36□□□□□ -0.91
KPNA1-207ENST00000482287 MAST1Q9Y2H9 1570 aa9.36□□□□□ -0.91
KPNA1-207ENST00000482287 ZFYVE16Q7Z3T8 1539 aa9.36□□□□□ -0.91
KPNA1-207ENST00000482287 SYCP2Q9BX26 1530 aa9.36□□□□□ -0.91
KPNA1-207ENST00000482287 COL17A1Q9UMD9 1497 aaPredicted RBP9.35□□□□□ -0.91
KPNA1-207ENST00000482287 PRKAR2AP13861 404 aaKnown RBP9.35□□□□□ -0.91
KPNA1-207ENST00000482287 DNMT1P26358 1616 aaKnown RBP9.34□□□□□ -0.91
KPNA1-207ENST00000482287 CAMSAP2Q08AD1 1489 aa9.34□□□□□ -0.91
KPNA1-207ENST00000482287 MAGI2Q86UL8 1455 aa9.34□□□□□ -0.91
KPNA1-207ENST00000482287 SHANK2Q9UPX8 1470 aa9.34□□□□□ -0.91
KPNA1-207ENST00000482287 PLXNC1O60486 1568 aa9.34□□□□□ -0.91
KPNA1-207ENST00000482287 AKNAQ7Z591 1439 aa9.34□□□□□ -0.91
KPNA1-207ENST00000482287 MKRN4PQ13434 485 aaPredicted RBP9.34□□□□□ -0.91
KPNA1-207ENST00000482287 PTPN23Q9H3S7 1636 aa9.34□□□□□ -0.91
KPNA1-207ENST00000482287 BCORL1Q5H9F3 1711 aa9.34□□□□□ -0.92
KPNA1-207ENST00000482287 ARHGEF12Q9NZN5 1544 aa9.33□□□□□ -0.92
KPNA1-207ENST00000482287 ARID3CA6NKF2 412 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms