RNA–Protein interactions for RNA: ENST00000479614.1

NF1-210, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,114 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-210ENST00000479614 CHRM1P11229 460 aaPredicted RBP10.23□□□□□ -0.77
NF1-210ENST00000479614 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.23□□□□□ -0.772e-8■■□□□ 12.5
NF1-210ENST00000479614 MRC2Q9UBG0 1479 aa10.23□□□□□ -0.77
NF1-210ENST00000479614 PSEN1P49768 467 aa10.22□□□□□ -0.77
NF1-210ENST00000479614 EMP3P54852 163 aa10.22□□□□□ -0.77
NF1-210ENST00000479614 CFTRP13569 1480 aa10.21□□□□□ -0.78
NF1-210ENST00000479614 CEP164Q9UPV0 1460 aa10.21□□□□□ -0.78
NF1-210ENST00000479614 WDR62O43379 1518 aa10.19□□□□□ -0.78
NF1-210ENST00000479614 FANCD2Q9BXW9 1451 aa10.18□□□□□ -0.78
NF1-210ENST00000479614 ILDR1Q86SU0 546 aaPredicted RBP10.17□□□□□ -0.78
NF1-210ENST00000479614 PDAP1Q13442 181 aaKnown RBP10.15□□□□□ -0.78
NF1-210ENST00000479614 HS3ST6Q96QI5 342 aa10.15□□□□□ -0.78
NF1-210ENST00000479614 POTEB3A0JP26 581 aa10.14□□□□□ -0.79
NF1-210ENST00000479614 POTEBQ6S5H4 581 aa10.14□□□□□ -0.79
NF1-210ENST00000479614 KRTAP3-3Q9BYR6 98 aa10.14□□□□□ -0.79
NF1-210ENST00000479614 KRTAP3-2Q9BYR7 98 aa10.14□□□□□ -0.79
NF1-210ENST00000479614 FAM205CA6NFA0 338 aa10.13□□□□□ -0.79
NF1-210ENST00000479614 DPY19L2Q6NUT2 758 aa10.13□□□□□ -0.79
NF1-210ENST00000479614 ABCC8Q09428 1581 aa10.11□□□□□ -0.79
NF1-210ENST00000479614 CABP2Q9NPB3 220 aa10.11□□□□□ -0.79
NF1-210ENST00000479614 CCDC88BA6NC98 1476 aa10.1□□□□□ -0.79
NF1-210ENST00000479614 BOLA1Q9Y3E2 137 aa10.08□□□□□ -0.8
NF1-210ENST00000479614 G3V3G9 751 aa10.07□□□□□ -0.8
NF1-210ENST00000479614 HOXB3P14651 431 aaPredicted RBP10.07□□□□□ -0.8
NF1-210ENST00000479614 SPOCK2Q92563 424 aa10.06□□□□□ -0.8
NF1-210ENST00000479614 CIZ1Q9ULV3 898 aaPredicted RBP10.06□□□□□ -0.8
NF1-210ENST00000479614 URB2Q14146 1524 aaKnown RBP10.05□□□□□ -0.8
NF1-210ENST00000479614 IFNLR1Q8IU57 520 aaPredicted RBP10.04□□□□□ -0.8
NF1-210ENST00000479614 IFT140Q96RY7 1462 aa10.02□□□□□ -0.81
NF1-210ENST00000479614 HOXB1P14653 301 aaPredicted RBP10□□□□□ -0.81
NF1-210ENST00000479614 ZNF710Q8N1W2 664 aa10□□□□□ -0.81
NF1-210ENST00000479614 TOPBP1Q92547 1522 aa10□□□□□ -0.81
NF1-210ENST00000479614 DNMBPQ6XZF7 1577 aa10□□□□□ -0.81
NF1-210ENST00000479614 DOK7Q18PE1 504 aa9.98□□□□□ -0.81
NF1-210ENST00000479614 ERBB3P21860 1342 aa9.96□□□□□ -0.82
NF1-210ENST00000479614 EFCAB3Q8N7B9 438 aa9.95□□□□□ -0.82
NF1-210ENST00000479614 WDR97A6NE52 1622 aa9.93□□□□□ -0.82
NF1-210ENST00000479614 RIMBP2O15034 1052 aa9.92□□□□□ -0.82
NF1-210ENST00000479614 TARBP1Q13395 1621 aaKnown RBP9.91□□□□□ -0.82
NF1-210ENST00000479614 EIF4G3O43432 1585 aaKnown RBP9.91□□□□□ -0.82
NF1-210ENST00000479614 VARS2Q5ST30 1063 aaKnown RBP9.9□□□□□ -0.82
NF1-210ENST00000479614 TRIM41Q8WV44 630 aa9.9□□□□□ -0.82
NF1-210ENST00000479614 ZNF608Q9ULD9 1512 aaPredicted RBP9.89□□□□□ -0.83
NF1-210ENST00000479614 TMEM92Q6UXU6 159 aa9.89□□□□□ -0.83
NF1-210ENST00000479614 MICALL2Q8IY33 904 aa9.89□□□□□ -0.83
NF1-210ENST00000479614 POLA1P09884 1462 aaPredicted RBP9.88□□□□□ -0.83
NF1-210ENST00000479614 RNF166Q96A37 237 aaPredicted RBP9.87□□□□□ -0.83
NF1-210ENST00000479614 SOGA1O94964 1423 aa9.87□□□□□ -0.83
NF1-210ENST00000479614 SUPT5HO00267 1087 aaKnown RBP9.86□□□□□ -0.83
NF1-210ENST00000479614 CHD1O14646 1710 aa9.86□□□□□ -0.83
NF1-210ENST00000479614 ZSWIM6Q9HCJ5 1215 aa9.86□□□□□ -0.83
NF1-210ENST00000479614 SOX12O15370 315 aa9.83□□□□□ -0.84
NF1-210ENST00000479614 MS4A4AQ96JQ5 239 aa9.83□□□□□ -0.84
NF1-210ENST00000479614 AQRO60306 1485 aaKnown RBP eCLIP9.83□□□□□ -0.84
NF1-210ENST00000479614 FGD5Q6ZNL6 1462 aa9.83□□□□□ -0.84
NF1-210ENST00000479614 GPR153Q6NV75 609 aa9.82□□□□□ -0.84
NF1-210ENST00000479614 ZNF687Q8N1G0 1237 aa9.82□□□□□ -0.84
NF1-210ENST00000479614 MYT1LQ9UL68 1186 aa9.82□□□□□ -0.84
NF1-210ENST00000479614 RIMBP3CA6NJZ7 1639 aa9.82□□□□□ -0.84
NF1-210ENST00000479614 RIMBP3BA6NNM3 1639 aa9.82□□□□□ -0.84
NF1-210ENST00000479614 RIMBP3Q9UFD9 1639 aa9.82□□□□□ -0.84
NF1-210ENST00000479614 CUX1P39880 1505 aa9.82□□□□□ -0.84
NF1-210ENST00000479614 MAGI1Q96QZ7 1491 aaPredicted RBP9.81□□□□□ -0.84
NF1-210ENST00000479614 RAD54L2Q9Y4B4 1467 aa9.8□□□□□ -0.84
NF1-210ENST00000479614 RIOK3O14730 519 aaKnown RBP9.8□□□□□ -0.84
NF1-210ENST00000479614 RNF25Q96BH1 459 aaPredicted RBP9.8□□□□□ -0.84
NF1-210ENST00000479614 GRIN2BQ13224 1484 aa9.79□□□□□ -0.84
NF1-210ENST00000479614 PHF8Q9UPP1 1060 aa9.79□□□□□ -0.84
NF1-210ENST00000479614 PBRM1Q86U86 1689 aa9.79□□□□□ -0.84
NF1-210ENST00000479614 TDRD9Q8NDG6 1382 aaKnown RBP9.78□□□□□ -0.84
NF1-210ENST00000479614 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.78□□□□□ -0.84
NF1-210ENST00000479614 CHMP7Q8WUX9 453 aaPredicted RBP9.78□□□□□ -0.84
NF1-210ENST00000479614 ZFP91Q96JP5 570 aaPredicted RBP9.78□□□□□ -0.84
NF1-210ENST00000479614 SYNJ1O43426 1573 aa9.78□□□□□ -0.84
NF1-210ENST00000479614 ARHGEF11O15085 1522 aa9.77□□□□□ -0.84
NF1-210ENST00000479614 WRNQ14191 1432 aaPredicted RBP eCLIP9.77□□□□□ -0.85
NF1-210ENST00000479614 ABCA10Q8WWZ4 1543 aa9.77□□□□□ -0.85
NF1-210ENST00000479614 BIVM-ERCC5R4GMW8 1640 aa9.76□□□□□ -0.85
NF1-210ENST00000479614 VGFO15240 615 aaPredicted RBP9.76□□□□□ -0.85
NF1-210ENST00000479614 GAPVD1Q14C86 1478 aa9.76□□□□□ -0.85
NF1-210ENST00000479614 TOP2BQ02880 1626 aa9.75□□□□□ -0.85
NF1-210ENST00000479614 SYNJ2O15056 1496 aa9.75□□□□□ -0.85
NF1-210ENST00000479614 SNAPC4Q5SXM2 1469 aa9.75□□□□□ -0.85
NF1-210ENST00000479614 ARSIQ5FYB1 569 aa9.75□□□□□ -0.85
NF1-210ENST00000479614 PTGER2P43116 358 aa9.74□□□□□ -0.85
NF1-210ENST00000479614 ABCA5Q8WWZ7 1642 aa9.73□□□□□ -0.85
NF1-210ENST00000479614 ZNF316A6NFI3 1004 aaPredicted RBP9.7□□□□□ -0.86
NF1-210ENST00000479614 CYB5RLQ6IPT4 315 aa9.7□□□□□ -0.86
NF1-210ENST00000479614 ANKRD13DQ6ZTN6 518 aa9.7□□□□□ -0.86
NF1-210ENST00000479614 KHSRPQ92945 711 aaKnown RBP eCLIP9.7□□□□□ -0.865e-7■■■□□ 16.2
NF1-210ENST00000479614 CLASP1Q7Z460 1538 aa9.7□□□□□ -0.86
NF1-210ENST00000479614 ERICH3Q5RHP9 1530 aa9.68□□□□□ -0.86
NF1-210ENST00000479614 NLRP6P59044 892 aa9.68□□□□□ -0.86
NF1-210ENST00000479614 FBXO22Q8NEZ5 403 aa9.68□□□□□ -0.86
NF1-210ENST00000479614 LSM11P83369 360 aaKnown RBP eCLIP9.66□□□□□ -0.86
NF1-210ENST00000479614 FHAD1B1AJZ9 1412 aa9.65□□□□□ -0.86
NF1-210ENST00000479614 GRIN2AQ12879 1464 aa9.65□□□□□ -0.87
NF1-210ENST00000479614 ARAP1Q96P48 1450 aa9.65□□□□□ -0.87
NF1-210ENST00000479614 ADAMTS12P58397 1594 aa9.64□□□□□ -0.87
NF1-210ENST00000479614 BCL11BQ9C0K0 894 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms