RNA–Protein interactions for RNA: ENST00000479162.5

NUP35-209, Transcript of nucleoporin 35, humanhuman

TSL 2

Gene NUP35, Length 2,828 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-209ENST00000479162 CCDC9Q9Y3X0 531 aaKnown RBP13.99□□□□□ -0.17
NUP35-209ENST00000479162 ANP32AP39687 249 aaKnown RBP13.98□□□□□ -0.17
NUP35-209ENST00000479162 ZNF830Q96NB3 372 aaPredicted RBP13.98□□□□□ -0.17
NUP35-209ENST00000479162 PRDM10Q9NQV6 1147 aa13.96□□□□□ -0.17
NUP35-209ENST00000479162 KCNG1Q9UIX4 513 aa13.96□□□□□ -0.17
NUP35-209ENST00000479162 POLA1P09884 1462 aaPredicted RBP13.96□□□□□ -0.17
NUP35-209ENST00000479162 SYNJ1O43426 1573 aa13.95□□□□□ -0.18
NUP35-209ENST00000479162 ABCA5Q8WWZ7 1642 aa13.95□□□□□ -0.18
NUP35-209ENST00000479162 ABCA10Q8WWZ4 1543 aa13.94□□□□□ -0.18
NUP35-209ENST00000479162 WRNQ14191 1432 aaPredicted RBP eCLIP13.94□□□□□ -0.18
NUP35-209ENST00000479162 FGD5Q6ZNL6 1462 aa13.92□□□□□ -0.18
NUP35-209ENST00000479162 TMEM51Q9NW97 253 aa13.92□□□□□ -0.18
NUP35-209ENST00000479162 TICAM2Q86XR7 235 aa13.91□□□□□ -0.18
NUP35-209ENST00000479162 PNNQ9H307 717 aaKnown RBP13.91□□□□□ -0.18
NUP35-209ENST00000479162 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.91□□□□□ -0.18
NUP35-209ENST00000479162 EIF4G3O43432 1585 aaKnown RBP13.91□□□□□ -0.18
NUP35-209ENST00000479162 RGS22Q8NE09 1264 aa13.9□□□□□ -0.18
NUP35-209ENST00000479162 VGFO15240 615 aaPredicted RBP13.9□□□□□ -0.18
NUP35-209ENST00000479162 PHF23Q9BUL5 403 aaPredicted RBP13.9□□□□□ -0.18
NUP35-209ENST00000479162 PBRM1Q86U86 1689 aa13.89□□□□□ -0.19
NUP35-209ENST00000479162 RRAGDQ9NQL2 400 aaPredicted RBP13.87□□□□□ -0.19
NUP35-209ENST00000479162 TMEM132AQ24JP5 1023 aa13.86□□□□□ -0.19
NUP35-209ENST00000479162 IGSF3O75054 1194 aa13.86□□□□□ -0.19
NUP35-209ENST00000479162 SMAP1Q8IYB5 467 aaPredicted RBP13.86□□□□□ -0.19
NUP35-209ENST00000479162 VGLL3A8MV65 326 aa13.85□□□□□ -0.19
NUP35-209ENST00000479162 IRX3P78415 501 aaPredicted RBP13.85□□□□□ -0.19
NUP35-209ENST00000479162 ERICH3Q5RHP9 1530 aa13.84□□□□□ -0.19
NUP35-209ENST00000479162 PTMAP06454 111 aaKnown RBP13.83□□□□□ -0.2
NUP35-209ENST00000479162 HMGB1P09429 215 aaKnown RBP13.83□□□□□ -0.2
NUP35-209ENST00000479162 FAM193AP78312 1265 aa13.83□□□□□ -0.2
NUP35-209ENST00000479162 DNAJC5Q9H3Z4 198 aa13.83□□□□□ -0.2
NUP35-209ENST00000479162 CLGNO14967 610 aa13.82□□□□□ -0.2
NUP35-209ENST00000479162 FRAT1Q92837 279 aaPredicted RBP13.82□□□□□ -0.2
NUP35-209ENST00000479162 SOGA1O94964 1423 aa13.82□□□□□ -0.2
NUP35-209ENST00000479162 DDRGK1Q96HY6 314 aa13.82□□□□□ -0.2
NUP35-209ENST00000479162 MAGI1Q96QZ7 1491 aaPredicted RBP13.82□□□□□ -0.2
NUP35-209ENST00000479162 CFAP44Q96MT7 982 aa13.82□□□□□ -0.2
NUP35-209ENST00000479162 GRIPAP1Q4V328 841 aa13.81□□□□□ -0.2
NUP35-209ENST00000479162 ZHX1Q9UKY1 873 aaPredicted RBP13.81□□□□□ -0.2
NUP35-209ENST00000479162 CUL7Q14999 1698 aa13.8□□□□□ -0.2
NUP35-209ENST00000479162 LAS1LQ9Y4W2 734 aaKnown RBP13.79□□□□□ -0.2
NUP35-209ENST00000479162 PATL2C9JE40 543 aaKnown RBP13.79□□□□□ -0.2
NUP35-209ENST00000479162 TMED8Q6PL24 325 aaPredicted RBP13.78□□□□□ -0.2
NUP35-209ENST00000479162 ANP32BQ92688 251 aaKnown RBP13.78□□□□□ -0.2
NUP35-209ENST00000479162 GRIN2BQ13224 1484 aa13.78□□□□□ -0.2
NUP35-209ENST00000479162 CLSTN1O94985 981 aa13.78□□□□□ -0.2
NUP35-209ENST00000479162 TPM2P07951 284 aa13.78□□□□□ -0.2
NUP35-209ENST00000479162 ZNF592Q92610 1267 aa13.78□□□□□ -0.2
NUP35-209ENST00000479162 UTP14CQ5TAP6 766 aaKnown RBP13.77□□□□□ -0.2
NUP35-209ENST00000479162 DCAF11Q8TEB1 546 aa13.77□□□□□ -0.21
NUP35-209ENST00000479162 UBTFP17480 764 aaKnown RBP13.77□□□□□ -0.21
NUP35-209ENST00000479162 CLCN1P35523 988 aa13.77□□□□□ -0.21
NUP35-209ENST00000479162 ADAMTS12P58397 1594 aa13.76□□□□□ -0.21
NUP35-209ENST00000479162 PPP4R3BQ5MIZ7 849 aa13.76□□□□□ -0.21
NUP35-209ENST00000479162 MMP14P50281 582 aa13.75□□□□□ -0.21
NUP35-209ENST00000479162 PLCD4Q9BRC7 762 aa13.75□□□□□ -0.21
NUP35-209ENST00000479162 PPP6R1Q9UPN7 881 aa13.75□□□□□ -0.21
NUP35-209ENST00000479162 HDAC5Q9UQL6 1122 aa13.75□□□□□ -0.21
NUP35-209ENST00000479162 ZNF608Q9ULD9 1512 aaPredicted RBP13.74□□□□□ -0.21
NUP35-209ENST00000479162 RAD54L2Q9Y4B4 1467 aa13.74□□□□□ -0.21
NUP35-209ENST00000479162 ZNF622Q969S3 477 aaKnown RBP eCLIP13.73□□□□□ -0.21
NUP35-209ENST00000479162 GAPVD1Q14C86 1478 aa13.73□□□□□ -0.21
NUP35-209ENST00000479162 PPP4R2Q9NY27 417 aa13.72□□□□□ -0.21
NUP35-209ENST00000479162 MAP7D2Q96T17 732 aa13.72□□□□□ -0.21
NUP35-209ENST00000479162 APPP05067 770 aa13.72□□□□□ -0.21
NUP35-209ENST00000479162 TNNT2P45379 298 aaPredicted RBP13.72□□□□□ -0.21
NUP35-209ENST00000479162 FAM43BQ6ZT52 329 aaPredicted RBP13.72□□□□□ -0.21
NUP35-209ENST00000479162 MCCP23508 829 aa13.71□□□□□ -0.22
NUP35-209ENST00000479162 CHD1O14646 1710 aa13.7□□□□□ -0.22
NUP35-209ENST00000479162 PTMSP20962 102 aa13.7□□□□□ -0.22
NUP35-209ENST00000479162 AXDND1Q5T1B0 1012 aaPredicted RBP13.69□□□□□ -0.22
NUP35-209ENST00000479162 SYNJ2O15056 1496 aa13.69□□□□□ -0.22
NUP35-209ENST00000479162 EEA1Q15075 1411 aa13.69□□□□□ -0.22
NUP35-209ENST00000479162 MAPK8IP2Q13387 824 aaPredicted RBP13.69□□□□□ -0.22
NUP35-209ENST00000479162 ARID3AQ99856 593 aa13.68□□□□□ -0.22
NUP35-209ENST00000479162 DMTNQ08495 405 aa13.68□□□□□ -0.22
NUP35-209ENST00000479162 SLC52A1Q9NWF4 448 aa13.68□□□□□ -0.22
NUP35-209ENST00000479162 DNTTIP2Q5QJE6 756 aaKnown RBP13.67□□□□□ -0.22
NUP35-209ENST00000479162 KIF27Q86VH2 1401 aa13.67□□□□□ -0.22
NUP35-209ENST00000479162 CLASP1Q7Z460 1538 aa13.66□□□□□ -0.22
NUP35-209ENST00000479162 MYCNP04198 464 aaPredicted RBP13.66□□□□□ -0.22
NUP35-209ENST00000479162 KCNH8Q96L42 1107 aa13.65□□□□□ -0.22
NUP35-209ENST00000479162 FHAD1B1AJZ9 1412 aa13.65□□□□□ -0.22
NUP35-209ENST00000479162 SNAPC4Q5SXM2 1469 aa13.65□□□□□ -0.22
NUP35-209ENST00000479162 TAF3Q5VWG9 929 aa13.63□□□□□ -0.23
NUP35-209ENST00000479162 KIF20AO95235 890 aa13.63□□□□□ -0.23
NUP35-209ENST00000479162 PHF14O94880 888 aa13.63□□□□□ -0.23
NUP35-209ENST00000479162 PSEN1P49768 467 aa13.63□□□□□ -0.23
NUP35-209ENST00000479162 AQRO60306 1485 aaKnown RBP eCLIP13.62□□□□□ -0.234e-6■■■□□ 15.5
NUP35-209ENST00000479162 SHROOM2Q13796 1616 aa13.62□□□□□ -0.23
NUP35-209ENST00000479162 PUS7Q96PZ0 661 aaKnown RBP13.62□□□□□ -0.23
NUP35-209ENST00000479162 NFKBIBQ15653 356 aa13.61□□□□□ -0.23
NUP35-209ENST00000479162 PSMD1Q99460 953 aa13.6□□□□□ -0.23
NUP35-209ENST00000479162 NUP160Q12769 1436 aa13.6□□□□□ -0.23
NUP35-209ENST00000479162 E9PSI1 815 aa13.59□□□□□ -0.23
NUP35-209ENST00000479162 L1TD1Q5T7N2 865 aaKnown RBP13.59□□□□□ -0.23
NUP35-209ENST00000479162 GRIN2AQ12879 1464 aa13.58□□□□□ -0.23
NUP35-209ENST00000479162 SOX12O15370 315 aa13.57□□□□□ -0.24
NUP35-209ENST00000479162 KIF21BO75037 1637 aa13.56□□□□□ -0.24
NUP35-209ENST00000479162 RUSC2Q8N2Y8 1516 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms