RNA–Protein interactions for RNA: ENST00000478842.5

SSR3-207, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3

Gene SSR3, Length 612 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-207ENST00000478842 DPY19L2Q6NUT2 758 aa12.37□□□□□ -0.43
SSR3-207ENST00000478842 POTEHQ6S545 545 aa12.37□□□□□ -0.43
SSR3-207ENST00000478842 MICALL2Q8IY33 904 aa12.37□□□□□ -0.43
SSR3-207ENST00000478842 DCBLD2Q96PD2 775 aa12.37□□□□□ -0.43
SSR3-207ENST00000478842 ARIH1Q9Y4X5 557 aaPredicted RBP12.37□□□□□ -0.43
SSR3-207ENST00000478842 CAMK2BQ13554 666 aa12.36□□□□□ -0.43
SSR3-207ENST00000478842 BOLA1Q9Y3E2 137 aa12.34□□□□□ -0.43
SSR3-207ENST00000478842 PPP1R15BQ5SWA1 713 aa12.33□□□□□ -0.44
SSR3-207ENST00000478842 TMC2Q8TDI7 906 aa12.33□□□□□ -0.44
SSR3-207ENST00000478842 L3MBTL3Q96JM7 780 aaPredicted RBP12.33□□□□□ -0.44
SSR3-207ENST00000478842 TMEM121BQ9BXQ6 578 aaPredicted RBP12.33□□□□□ -0.44
SSR3-207ENST00000478842 SEC24BO95487 1268 aa12.3□□□□□ -0.44
SSR3-207ENST00000478842 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.3□□□□□ -0.44
SSR3-207ENST00000478842 LMOD2Q6P5Q4 547 aa12.29□□□□□ -0.44
SSR3-207ENST00000478842 SLC39A7Q92504 469 aa12.29□□□□□ -0.44
SSR3-207ENST00000478842 SMYD5Q6GMV2 418 aa12.28□□□□□ -0.44
SSR3-207ENST00000478842 TESPA1A2RU30 521 aaPredicted RBP12.27□□□□□ -0.45
SSR3-207ENST00000478842 FOXK1P85037 733 aa12.27□□□□□ -0.45
SSR3-207ENST00000478842 SEMA3EO15041 775 aa12.26□□□□□ -0.45
SSR3-207ENST00000478842 C7P10643 843 aa12.26□□□□□ -0.45
SSR3-207ENST00000478842 DSG2Q14126 1118 aa12.25□□□□□ -0.45
SSR3-207ENST00000478842 PELP1Q8IZL8 1130 aaKnown RBP12.23□□□□□ -0.45
SSR3-207ENST00000478842 C2orf72A6NCS6 295 aa12.2□□□□□ -0.46
SSR3-207ENST00000478842 KIF3CO14782 793 aa12.2□□□□□ -0.46
SSR3-207ENST00000478842 PLPP6Q8IY26 295 aa12.19□□□□□ -0.46
SSR3-207ENST00000478842 COLQQ9Y215 455 aaPredicted RBP12.19□□□□□ -0.46
SSR3-207ENST00000478842 SPDYE16A6NNV3 312 aaPredicted RBP12.18□□□□□ -0.46
SSR3-207ENST00000478842 METRNQ9UJH8 293 aa12.17□□□□□ -0.46
SSR3-207ENST00000478842 SP7Q8TDD2 431 aaPredicted RBP12.16□□□□□ -0.46
SSR3-207ENST00000478842 EMILIN3Q9NT22 766 aa12.16□□□□□ -0.46
SSR3-207ENST00000478842 DPYSL4O14531 572 aa12.15□□□□□ -0.46
SSR3-207ENST00000478842 PDIA6Q15084 440 aa12.14□□□□□ -0.47
SSR3-207ENST00000478842 C3orf67Q6ZVT6 689 aa12.11□□□□□ -0.47
SSR3-207ENST00000478842 ZC3H15Q8WU90 426 aaKnown RBP12.11□□□□□ -0.47
SSR3-207ENST00000478842 POTEFA5A3E0 1075 aa12.1□□□□□ -0.47
SSR3-207ENST00000478842 POTEIP0CG38 1075 aa12.09□□□□□ -0.47
SSR3-207ENST00000478842 MAP3K9P80192 1104 aa12.08□□□□□ -0.48
SSR3-207ENST00000478842 TMEM92Q6UXU6 159 aa12.08□□□□□ -0.48
SSR3-207ENST00000478842 MLLT3P42568 568 aaPredicted RBP12.05□□□□□ -0.48
SSR3-207ENST00000478842 OXER1Q8TDS5 423 aa12.03□□□□□ -0.48
SSR3-207ENST00000478842 TBC1D12O60347 775 aa12.02□□□□□ -0.49
SSR3-207ENST00000478842 UPF1Q92900 1129 aaKnown RBP eCLIP12.01□□□□□ -0.49
SSR3-207ENST00000478842 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.01□□□□□ -0.49
SSR3-207ENST00000478842 ZNF316A6NFI3 1004 aaPredicted RBP12□□□□□ -0.49
SSR3-207ENST00000478842 ZMYND10O75800 440 aa12□□□□□ -0.49
SSR3-207ENST00000478842 RBM26Q5T8P6 1007 aaKnown RBP12□□□□□ -0.49
SSR3-207ENST00000478842 GPIHBP1Q8IV16 184 aa12□□□□□ -0.49
SSR3-207ENST00000478842 SLC34A2O95436 690 aa11.97□□□□□ -0.49
SSR3-207ENST00000478842 PTCD2Q8WV60 388 aaKnown RBP11.97□□□□□ -0.49
SSR3-207ENST00000478842 PTGER2P43116 358 aa11.96□□□□□ -0.49
SSR3-207ENST00000478842 BARGINQ6ZT62 677 aa11.95□□□□□ -0.5
SSR3-207ENST00000478842 RB1CC1Q8TDY2 1594 aa11.95□□□□□ -0.5
SSR3-207ENST00000478842 GRXCR2A6NFK2 248 aa11.94□□□□□ -0.5
SSR3-207ENST00000478842 SLC24A3Q9HC58 644 aa11.93□□□□□ -0.5
SSR3-207ENST00000478842 EVI5O60447 810 aa11.92□□□□□ -0.5
SSR3-207ENST00000478842 OSBPP22059 807 aa11.88□□□□□ -0.51
SSR3-207ENST00000478842 KRI1Q8N9T8 703 aaKnown RBP11.87□□□□□ -0.51
SSR3-207ENST00000478842 DDX12PQ92771 950 aa11.87□□□□□ -0.51
SSR3-207ENST00000478842 ANO8Q9HCE9 1232 aaPredicted RBP11.87□□□□□ -0.51
SSR3-207ENST00000478842 TMEM132AQ24JP5 1023 aa11.86□□□□□ -0.51
SSR3-207ENST00000478842 AK7Q96M32 723 aa11.86□□□□□ -0.51
SSR3-207ENST00000478842 NUTM2FA1L443 756 aa11.85□□□□□ -0.51
SSR3-207ENST00000478842 BRPF1P55201 1214 aaPredicted RBP11.84□□□□□ -0.51
SSR3-207ENST00000478842 MAMSTRQ6ZN01 415 aa11.82□□□□□ -0.52
SSR3-207ENST00000478842 PCDHGA4Q9Y5G9 962 aa11.82□□□□□ -0.52
SSR3-207ENST00000478842 GPR37O15354 613 aa11.81□□□□□ -0.52
SSR3-207ENST00000478842 NEUROD2Q15784 382 aa11.81□□□□□ -0.52
SSR3-207ENST00000478842 EPAS1Q99814 870 aa11.81□□□□□ -0.52
SSR3-207ENST00000478842 NACADO15069 1562 aa11.8□□□□□ -0.52
SSR3-207ENST00000478842 FCHSD2O94868 740 aa11.8□□□□□ -0.52
SSR3-207ENST00000478842 PHF14O94880 888 aa11.8□□□□□ -0.52
SSR3-207ENST00000478842 SCUBE2Q9NQ36 999 aa11.8□□□□□ -0.52
SSR3-207ENST00000478842 HIC1Q14526 733 aa11.79□□□□□ -0.52
SSR3-207ENST00000478842 DOK7Q18PE1 504 aa11.78□□□□□ -0.52
SSR3-207ENST00000478842 MINK1Q8N4C8 1332 aaPredicted RBP11.78□□□□□ -0.52
SSR3-207ENST00000478842 RIMBP2O15034 1052 aa11.77□□□□□ -0.53
SSR3-207ENST00000478842 GNPATO15228 680 aa11.77□□□□□ -0.53
SSR3-207ENST00000478842 ZSWIM6Q9HCJ5 1215 aa11.76□□□□□ -0.53
SSR3-207ENST00000478842 DAXXQ9UER7 740 aaPredicted RBP11.76□□□□□ -0.53
SSR3-207ENST00000478842 EN1Q05925 392 aaPredicted RBP11.75□□□□□ -0.53
SSR3-207ENST00000478842 MAP2K5Q13163 448 aa11.75□□□□□ -0.53
SSR3-207ENST00000478842 SLAIN1Q8ND83 568 aa11.75□□□□□ -0.53
SSR3-207ENST00000478842 POTEJP0CG39 1038 aa11.74□□□□□ -0.53
SSR3-207ENST00000478842 FBXW7Q969H0 707 aa11.74□□□□□ -0.53
SSR3-207ENST00000478842 KDM4FA0A1W2PPD8 638 aa11.73□□□□□ -0.53
SSR3-207ENST00000478842 PTGDRQ13258 359 aa11.73□□□□□ -0.53
SSR3-207ENST00000478842 TYW1BQ6NUM6 668 aa11.73□□□□□ -0.53
SSR3-207ENST00000478842 JPH4Q96JJ6 628 aa11.73□□□□□ -0.53
SSR3-207ENST00000478842 TRIM66O15016 1216 aa11.72□□□□□ -0.53
SSR3-207ENST00000478842 POTEB2H3BUK9 544 aa11.71□□□□□ -0.53
SSR3-207ENST00000478842 IRF6O14896 467 aa11.71□□□□□ -0.53
SSR3-207ENST00000478842 MAP3K7O43318 606 aa11.71□□□□□ -0.53
SSR3-207ENST00000478842 PRIM1P49642 420 aaKnown RBP11.71□□□□□ -0.53
SSR3-207ENST00000478842 PCDHGA10Q9Y5H3 936 aa11.71□□□□□ -0.53
SSR3-207ENST00000478842 HOXB3P14651 431 aaPredicted RBP11.69□□□□□ -0.54
SSR3-207ENST00000478842 PDE4DQ08499 809 aa11.68□□□□□ -0.54
SSR3-207ENST00000478842 ZNF710Q8N1W2 664 aa11.68□□□□□ -0.54
SSR3-207ENST00000478842 UNC13AQ9UPW8 1703 aa11.68□□□□□ -0.54
SSR3-207ENST00000478842 CCDC102AQ96A19 550 aa11.67□□□□□ -0.54
SSR3-207ENST00000478842 SNPHO15079 494 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms