RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 RAPGEF6Q8TEU7 1601 aa24.61■■□□□ 1.53
USP11-207ENST00000478596 IQSEC2Q5JU85 1478 aa24.61■■□□□ 1.53
USP11-207ENST00000478596 UHRF1BP1Q6BDS2 1440 aa24.58■■□□□ 1.53
USP11-207ENST00000478596 NUP153P49790 1475 aaKnown RBP24.58■■□□□ 1.52
USP11-207ENST00000478596 CEBPAP49715 358 aaPredicted RBP24.56■■□□□ 1.52
USP11-207ENST00000478596 HECW1Q76N89 1606 aa24.56■■□□□ 1.52
USP11-207ENST00000478596 LTBP4Q8N2S1 1624 aa24.56■■□□□ 1.52
USP11-207ENST00000478596 PLEKHD1A6NEE1 506 aa24.54■■□□□ 1.52
USP11-207ENST00000478596 ATP10AO60312 1499 aa24.53■■□□□ 1.52
USP11-207ENST00000478596 SAMD9Q5K651 1589 aa24.53■■□□□ 1.52
USP11-207ENST00000478596 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.52■■□□□ 1.52
USP11-207ENST00000478596 C9orf84Q5VXU9 1444 aa24.52■■□□□ 1.52
USP11-207ENST00000478596 SCAPERQ9BY12 1400 aa24.47■■□□□ 1.51
USP11-207ENST00000478596 SETD1BQ9UPS6 1966 aaKnown RBP24.43■■□□□ 1.5
USP11-207ENST00000478596 PLCH2O75038 1416 aa24.4■■□□□ 1.5
USP11-207ENST00000478596 NCOA1Q15788 1441 aa24.38■■□□□ 1.49
USP11-207ENST00000478596 TRAPPC8Q9Y2L5 1435 aa24.34■■□□□ 1.49
USP11-207ENST00000478596 UBAP1LF5GYI3 381 aa24.33■■□□□ 1.49
USP11-207ENST00000478596 EFCAB2Q5VUJ9 269 aa24.29■■□□□ 1.48
USP11-207ENST00000478596 ZNF518AQ6AHZ1 1483 aa24.29■■□□□ 1.48
USP11-207ENST00000478596 C3P01024 1663 aa24.29■■□□□ 1.48
USP11-207ENST00000478596 REREQ9P2R6 1566 aa24.29■■□□□ 1.48
USP11-207ENST00000478596 KDM5CP41229 1560 aa24.25■■□□□ 1.47
USP11-207ENST00000478596 ZNF335Q9H4Z2 1342 aaPredicted RBP24.24■■□□□ 1.47
USP11-207ENST00000478596 MED1Q15648 1581 aaPredicted RBP24.22■■□□□ 1.47
USP11-207ENST00000478596 DIP2CQ9Y2E4 1556 aa24.22■■□□□ 1.47
USP11-207ENST00000478596 AGLP35573 1532 aa24.22■■□□□ 1.47
USP11-207ENST00000478596 AFAP1Q8N556 730 aa24.22■■□□□ 1.47
USP11-207ENST00000478596 ESF1Q9H501 851 aaKnown RBP24.22■■□□□ 1.47
USP11-207ENST00000478596 CAMSAP1Q5T5Y3 1602 aa24.21■■□□□ 1.47
USP11-207ENST00000478596 CNTLNQ9NXG0 1405 aa24.19■■□□□ 1.46
USP11-207ENST00000478596 CDK13Q14004 1512 aaKnown RBP24.19■■□□□ 1.46
USP11-207ENST00000478596 NPATQ14207 1427 aa24.18■■□□□ 1.46
USP11-207ENST00000478596 MLH3Q9UHC1 1453 aa24.16■■□□□ 1.46
USP11-207ENST00000478596 NCKAP5LQ9HCH0 1330 aa24.15■■□□□ 1.46
USP11-207ENST00000478596 RANGAP1P46060 587 aaPredicted RBP24.15■■□□□ 1.46
USP11-207ENST00000478596 MYO5CQ9NQX4 1742 aa24.15■■□□□ 1.46
USP11-207ENST00000478596 HSPA1LP34931 641 aa24.14■■□□□ 1.45
USP11-207ENST00000478596 CSRNP3Q8WYN3 585 aa24.14■■□□□ 1.45
USP11-207ENST00000478596 PKD2Q13563 968 aa24.13■■□□□ 1.45
USP11-207ENST00000478596 MYT1LQ9UL68 1186 aa24.13■■□□□ 1.45
USP11-207ENST00000478596 ABCA6Q8N139 1617 aa24.12■■□□□ 1.45
USP11-207ENST00000478596 PLA2R1Q13018 1463 aa24.11■■□□□ 1.45
USP11-207ENST00000478596 TCOF1Q13428 1488 aaKnown RBP24.08■■□□□ 1.45
USP11-207ENST00000478596 ARHGAP5Q13017 1502 aa24.08■■□□□ 1.45
USP11-207ENST00000478596 ZMYM3Q14202 1370 aa24.04■■□□□ 1.44
USP11-207ENST00000478596 CDK11AQ9UQ88 783 aaPredicted RBP24.04■■□□□ 1.44
USP11-207ENST00000478596 MROH2AA6NES4 1674 aa24.04■■□□□ 1.44
USP11-207ENST00000478596 TOM1O60784 492 aa24.03■■□□□ 1.44
USP11-207ENST00000478596 PHF23Q9BUL5 403 aaPredicted RBP24.03■■□□□ 1.44
USP11-207ENST00000478596 KIF14Q15058 1648 aa24.02■■□□□ 1.44
USP11-207ENST00000478596 SCAF1Q9H7N4 1312 aaKnown RBP24.02■■□□□ 1.44
USP11-207ENST00000478596 PIP4K2BP78356 416 aa24.01■■□□□ 1.43
USP11-207ENST00000478596 PPP6R1Q9UPN7 881 aa24.01■■□□□ 1.43
USP11-207ENST00000478596 ZNF142P52746 1687 aaPredicted RBP24■■□□□ 1.43
USP11-207ENST00000478596 TROQ12816 1431 aaPredicted RBP23.99■■□□□ 1.43
USP11-207ENST00000478596 CEP170BQ9Y4F5 1589 aaPredicted RBP23.96■■□□□ 1.43
USP11-207ENST00000478596 MYO3AQ8NEV4 1616 aa23.95■■□□□ 1.43
USP11-207ENST00000478596 CPS1P31327 1500 aa23.95■■□□□ 1.43
USP11-207ENST00000478596 ABCC1P33527 1531 aa23.95■■□□□ 1.43
USP11-207ENST00000478596 CHIC1Q5VXU3 224 aa23.94■■□□□ 1.42
USP11-207ENST00000478596 CLIP1P30622 1438 aa23.93■■□□□ 1.42
USP11-207ENST00000478596 KIDINS220Q9ULH0 1771 aa23.93■■□□□ 1.42
USP11-207ENST00000478596 PTPRKQ15262 1439 aa23.93■■□□□ 1.42
USP11-207ENST00000478596 FMN1Q68DA7 1419 aa23.92■■□□□ 1.42
USP11-207ENST00000478596 ATP1B4Q9UN42 357 aaPredicted RBP23.91■■□□□ 1.42
USP11-207ENST00000478596 CDC42BPBQ9Y5S2 1711 aa23.9■■□□□ 1.42
USP11-207ENST00000478596 EEA1Q15075 1411 aa23.88■■□□□ 1.41
USP11-207ENST00000478596 ITSN2Q9NZM3 1697 aa23.88■■□□□ 1.41
USP11-207ENST00000478596 SHANK2Q9UPX8 1470 aa23.87■■□□□ 1.41
USP11-207ENST00000478596 PREX2Q70Z35 1606 aa23.85■■□□□ 1.41
USP11-207ENST00000478596 SUPT6HQ7KZ85 1726 aaKnown RBP23.85■■□□□ 1.41
USP11-207ENST00000478596 A2ML1A8K2U0 1454 aa23.83■■□□□ 1.41
USP11-207ENST00000478596 ALKQ9UM73 1620 aa23.83■■□□□ 1.41
USP11-207ENST00000478596 CLTCQ00610 1675 aaKnown RBP23.82■■□□□ 1.4
USP11-207ENST00000478596 SAMD9LQ8IVG5 1584 aa23.82■■□□□ 1.4
USP11-207ENST00000478596 DNMT1P26358 1616 aaKnown RBP23.79■■□□□ 1.4
USP11-207ENST00000478596 NEURL4Q96JN8 1562 aa23.78■■□□□ 1.4
USP11-207ENST00000478596 RGS17Q9UGC6 210 aaPredicted RBP23.78■■□□□ 1.4
USP11-207ENST00000478596 PLXNC1O60486 1568 aa23.78■■□□□ 1.4
USP11-207ENST00000478596 SPAG9O60271 1321 aaKnown RBP23.76■■□□□ 1.39
USP11-207ENST00000478596 VWDEQ8N2E2 1590 aa23.74■■□□□ 1.39
USP11-207ENST00000478596 A2MP01023 1474 aa23.73■■□□□ 1.39
USP11-207ENST00000478596 ARHGAP35Q9NRY4 1499 aa23.73■■□□□ 1.39
USP11-207ENST00000478596 POLR1AO95602 1720 aaPredicted RBP23.73■■□□□ 1.39
USP11-207ENST00000478596 GGT6Q6P531 493 aa23.72■■□□□ 1.39
USP11-207ENST00000478596 ATP7AQ04656 1500 aa23.7■■□□□ 1.38
USP11-207ENST00000478596 ANKLE2Q86XL3 938 aa23.68■■□□□ 1.38
USP11-207ENST00000478596 SYCP2Q9BX26 1530 aa23.68■■□□□ 1.38
USP11-207ENST00000478596 LRRIQ1Q96JM4 1722 aa23.67■■□□□ 1.38
USP11-207ENST00000478596 INO80Q9ULG1 1556 aaPredicted RBP23.66■■□□□ 1.38
USP11-207ENST00000478596 CDC42BPAQ5VT25 1732 aa23.66■■□□□ 1.38
USP11-207ENST00000478596 MED14O60244 1454 aa23.66■■□□□ 1.38
USP11-207ENST00000478596 KIAA1107Q9UPP5 1409 aa23.65■■□□□ 1.38
USP11-207ENST00000478596 TNRQ92752 1358 aa23.65■■□□□ 1.38
USP11-207ENST00000478596 HNRNPMP52272 730 aaKnown RBP eCLIP23.64■■□□□ 1.37
USP11-207ENST00000478596 ZNF777Q9ULD5 760 aaPredicted RBP23.64■■□□□ 1.37
USP11-207ENST00000478596 NPHP4O75161 1426 aaPredicted RBP23.63■■□□□ 1.37
USP11-207ENST00000478596 SENP3Q9H4L4 574 aaPredicted RBP23.62■■□□□ 1.37
USP11-207ENST00000478596 LRRC7Q96NW7 1537 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms