RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 MYO5CQ9NQX4 1742 aa9.2□□□□□ -0.94
TRA2B-211ENST00000477939 EHMT2Q96KQ7 1210 aa9.2□□□□□ -0.94
TRA2B-211ENST00000477939 YEATS2Q9ULM3 1422 aa9.19□□□□□ -0.94
TRA2B-211ENST00000477939 ZFYVE16Q7Z3T8 1539 aa9.19□□□□□ -0.94
TRA2B-211ENST00000477939 RIMS1Q86UR5 1692 aaKnown RBP9.19□□□□□ -0.94
TRA2B-211ENST00000477939 PLCH2O75038 1416 aa9.18□□□□□ -0.94
TRA2B-211ENST00000477939 UBTFP17480 764 aaKnown RBP9.18□□□□□ -0.94
TRA2B-211ENST00000477939 POGZQ7Z3K3 1410 aa9.18□□□□□ -0.94
TRA2B-211ENST00000477939 BCL11AQ9H165 835 aa9.18□□□□□ -0.94
TRA2B-211ENST00000477939 PCF11O94913 1555 aaKnown RBP9.17□□□□□ -0.94
TRA2B-211ENST00000477939 ILDR1Q86SU0 546 aaPredicted RBP9.17□□□□□ -0.94
TRA2B-211ENST00000477939 MAGI2Q86UL8 1455 aa9.16□□□□□ -0.94
TRA2B-211ENST00000477939 LMTK3Q96Q04 1460 aa9.16□□□□□ -0.94
TRA2B-211ENST00000477939 ARXQ96QS3 562 aa9.16□□□□□ -0.94
TRA2B-211ENST00000477939 TROQ12816 1431 aaPredicted RBP9.15□□□□□ -0.94
TRA2B-211ENST00000477939 SCAPERQ9BY12 1400 aa9.15□□□□□ -0.94
TRA2B-211ENST00000477939 ARID4BQ4LE39 1312 aaPredicted RBP9.15□□□□□ -0.94
TRA2B-211ENST00000477939 FER1L4A9Z1Z3 1794 aa9.14□□□□□ -0.95
TRA2B-211ENST00000477939 KDM5CP41229 1560 aa9.14□□□□□ -0.95
TRA2B-211ENST00000477939 CDC42BPBQ9Y5S2 1711 aa9.14□□□□□ -0.95
TRA2B-211ENST00000477939 PREX2Q70Z35 1606 aa9.13□□□□□ -0.95
TRA2B-211ENST00000477939 ATP1B4Q9UN42 357 aaPredicted RBP9.13□□□□□ -0.95
TRA2B-211ENST00000477939 ARHGAP5Q13017 1502 aa9.13□□□□□ -0.95
TRA2B-211ENST00000477939 CLIP1P30622 1438 aa9.13□□□□□ -0.95
TRA2B-211ENST00000477939 CCDC18Q5T9S5 1454 aa9.12□□□□□ -0.95
TRA2B-211ENST00000477939 ZNF518AQ6AHZ1 1483 aa9.12□□□□□ -0.95
TRA2B-211ENST00000477939 C9orf84Q5VXU9 1444 aa9.12□□□□□ -0.95
TRA2B-211ENST00000477939 CASKIN1Q8WXD9 1431 aa9.12□□□□□ -0.95
TRA2B-211ENST00000477939 ARHGEF12Q9NZN5 1544 aa9.11□□□□□ -0.95
TRA2B-211ENST00000477939 DIP2CQ9Y2E4 1556 aa9.11□□□□□ -0.95
TRA2B-211ENST00000477939 CDC42BPAQ5VT25 1732 aa9.11□□□□□ -0.95
TRA2B-211ENST00000477939 ABCC1P33527 1531 aa9.1□□□□□ -0.95
TRA2B-211ENST00000477939 ATP10AO60312 1499 aa9.1□□□□□ -0.95
TRA2B-211ENST00000477939 FYCO1Q9BQS8 1478 aa9.1□□□□□ -0.95
TRA2B-211ENST00000477939 ABCA6Q8N139 1617 aa9.1□□□□□ -0.95
TRA2B-211ENST00000477939 EFCAB2Q5VUJ9 269 aa9.1□□□□□ -0.95
TRA2B-211ENST00000477939 CDK11AQ9UQ88 783 aaPredicted RBP9.1□□□□□ -0.95
TRA2B-211ENST00000477939 ITSN2Q9NZM3 1697 aa9.1□□□□□ -0.95
TRA2B-211ENST00000477939 REREQ9P2R6 1566 aa9.09□□□□□ -0.95
TRA2B-211ENST00000477939 MLECQ14165 292 aa9.07□□□□□ -0.96
TRA2B-211ENST00000477939 MLH3Q9UHC1 1453 aa9.07□□□□□ -0.96
TRA2B-211ENST00000477939 PREX1Q8TCU6 1659 aa9.07□□□□□ -0.96
TRA2B-211ENST00000477939 KIDINS220Q9ULH0 1771 aa9.07□□□□□ -0.96
TRA2B-211ENST00000477939 TRAPPC8Q9Y2L5 1435 aa9.06□□□□□ -0.96
TRA2B-211ENST00000477939 AFAP1Q8N556 730 aa9.06□□□□□ -0.96
TRA2B-211ENST00000477939 SAMD9LQ8IVG5 1584 aa9.06□□□□□ -0.96
TRA2B-211ENST00000477939 HSPA2P54652 639 aa9.05□□□□□ -0.96
TRA2B-211ENST00000477939 PLPPR3Q6T4P5 718 aa9.05□□□□□ -0.96
TRA2B-211ENST00000477939 AGLP35573 1532 aa9.04□□□□□ -0.96
TRA2B-211ENST00000477939 SYCP2Q9BX26 1530 aa9.04□□□□□ -0.96
TRA2B-211ENST00000477939 C3P01024 1663 aa9.04□□□□□ -0.96
TRA2B-211ENST00000477939 GPATCH8Q9UKJ3 1502 aaKnown RBP9.03□□□□□ -0.96
TRA2B-211ENST00000477939 FBXO41Q8TF61 875 aa9.02□□□□□ -0.97
TRA2B-211ENST00000477939 INO80Q9ULG1 1556 aaPredicted RBP9.02□□□□□ -0.97
TRA2B-211ENST00000477939 CEBPAP49715 358 aaPredicted RBP9.01□□□□□ -0.97
TRA2B-211ENST00000477939 STRCQ7RTU9 1775 aa9.01□□□□□ -0.97
TRA2B-211ENST00000477939 PLXNC1O60486 1568 aa9□□□□□ -0.97
TRA2B-211ENST00000477939 TIAM1Q13009 1591 aa9□□□□□ -0.97
TRA2B-211ENST00000477939 CENPBP07199 599 aaPredicted RBP9□□□□□ -0.97
TRA2B-211ENST00000477939 ATP7AQ04656 1500 aa9□□□□□ -0.97
TRA2B-211ENST00000477939 SETD1BQ9UPS6 1966 aaKnown RBP8.99□□□□□ -0.97
TRA2B-211ENST00000477939 MYT1LQ9UL68 1186 aa8.99□□□□□ -0.97
TRA2B-211ENST00000477939 EHBP1L1Q8N3D4 1523 aa8.99□□□□□ -0.97
TRA2B-211ENST00000477939 UHRF1BP1Q6BDS2 1440 aa8.98□□□□□ -0.97
TRA2B-211ENST00000477939 MROH2AA6NES4 1674 aa8.98□□□□□ -0.97
TRA2B-211ENST00000477939 SUPT6HQ7KZ85 1726 aaKnown RBP8.98□□□□□ -0.97
TRA2B-211ENST00000477939 CEP162Q5TB80 1403 aa8.97□□□□□ -0.97
TRA2B-211ENST00000477939 KIAA1107Q9UPP5 1409 aa8.97□□□□□ -0.97
TRA2B-211ENST00000477939 PLEKHH2Q8IVE3 1493 aa8.97□□□□□ -0.97
TRA2B-211ENST00000477939 ZNF777Q9ULD5 760 aaPredicted RBP8.97□□□□□ -0.97
TRA2B-211ENST00000477939 MTUS2Q5JR59 1369 aa8.97□□□□□ -0.97
TRA2B-211ENST00000477939 CCNB3Q8WWL7 1395 aa8.96□□□□□ -0.98
TRA2B-211ENST00000477939 CNTLNQ9NXG0 1405 aa8.96□□□□□ -0.98
TRA2B-211ENST00000477939 CLTCQ00610 1675 aaKnown RBP8.95□□□□□ -0.98
TRA2B-211ENST00000477939 ADGBQ8N7X0 1667 aa8.95□□□□□ -0.98
TRA2B-211ENST00000477939 HNRNPMP52272 730 aaKnown RBP eCLIP8.95□□□□□ -0.987e-9■■■■□ 26.6
TRA2B-211ENST00000477939 CFDP1Q9UEE9 299 aaPredicted RBP8.95□□□□□ -0.98
TRA2B-211ENST00000477939 SPAG9O60271 1321 aaKnown RBP8.95□□□□□ -0.98
TRA2B-211ENST00000477939 A2MP01023 1474 aa8.95□□□□□ -0.98
TRA2B-211ENST00000477939 MBD5Q9P267 1494 aa8.94□□□□□ -0.98
TRA2B-211ENST00000477939 ZNF142P52746 1687 aaPredicted RBP8.94□□□□□ -0.98
TRA2B-211ENST00000477939 NPATQ14207 1427 aa8.93□□□□□ -0.98
TRA2B-211ENST00000477939 MYO3AQ8NEV4 1616 aa8.93□□□□□ -0.98
TRA2B-211ENST00000477939 NCOA2Q15596 1464 aa8.92□□□□□ -0.98
TRA2B-211ENST00000477939 NCOA1Q15788 1441 aa8.92□□□□□ -0.98
TRA2B-211ENST00000477939 ZNF644Q9H582 1327 aaPredicted RBP8.92□□□□□ -0.98
TRA2B-211ENST00000477939 HRCP23327 699 aa8.92□□□□□ -0.98
TRA2B-211ENST00000477939 CERKQ8TCT0 537 aa8.92□□□□□ -0.98
TRA2B-211ENST00000477939 CAMSAP2Q08AD1 1489 aa8.91□□□□□ -0.98
TRA2B-211ENST00000477939 ZMYM3Q14202 1370 aa8.91□□□□□ -0.98
TRA2B-211ENST00000477939 ESF1Q9H501 851 aaKnown RBP8.91□□□□□ -0.98
TRA2B-211ENST00000477939 CAMSAP1Q5T5Y3 1602 aa8.91□□□□□ -0.98
TRA2B-211ENST00000477939 CCDC141Q6ZP82 1450 aa8.9□□□□□ -0.98
TRA2B-211ENST00000477939 PTPRTO14522 1441 aa8.9□□□□□ -0.98
TRA2B-211ENST00000477939 LTBP4Q8N2S1 1624 aa8.9□□□□□ -0.99
TRA2B-211ENST00000477939 CEP170BQ9Y4F5 1589 aaPredicted RBP8.9□□□□□ -0.99
TRA2B-211ENST00000477939 RTEL1-TNFRSF6BF6WH68 1400 aa8.89□□□□□ -0.99
TRA2B-211ENST00000477939 PTPRKQ15262 1439 aa8.89□□□□□ -0.99
TRA2B-211ENST00000477939 ARHGEF5Q12774 1597 aa8.88□□□□□ -0.99
TRA2B-211ENST00000477939 AMER1Q5JTC6 1135 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms