RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 CFAP74Q9C0B2 1584 aa26.57■■□□□ 1.84
SMG5-204ENST00000476954 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.55■■□□□ 1.84
SMG5-204ENST00000476954 ARHGEF12Q9NZN5 1544 aa26.54■■□□□ 1.84
SMG5-204ENST00000476954 MAGI2Q86UL8 1455 aa26.5■■□□□ 1.83
SMG5-204ENST00000476954 DMRT2Q9Y5R5 561 aa26.49■■□□□ 1.83
SMG5-204ENST00000476954 PLEKHD1A6NEE1 506 aa26.47■■□□□ 1.83
SMG5-204ENST00000476954 LTBP4Q8N2S1 1624 aa26.43■■□□□ 1.82
SMG5-204ENST00000476954 SCAPERQ9BY12 1400 aa26.43■■□□□ 1.82
SMG5-204ENST00000476954 ATP10AO60312 1499 aa26.42■■□□□ 1.82
SMG5-204ENST00000476954 UHRF1BP1Q6BDS2 1440 aa26.42■■□□□ 1.82
SMG5-204ENST00000476954 RANGAP1P46060 587 aaPredicted RBP26.41■■□□□ 1.82
SMG5-204ENST00000476954 PTPRTO14522 1441 aa26.39■■□□□ 1.82
SMG5-204ENST00000476954 C9orf84Q5VXU9 1444 aa26.39■■□□□ 1.82
SMG5-204ENST00000476954 SETD1BQ9UPS6 1966 aaKnown RBP26.39■■□□□ 1.82
SMG5-204ENST00000476954 C3P01024 1663 aa26.31■■□□□ 1.8
SMG5-204ENST00000476954 PLCH2O75038 1416 aa26.31■■□□□ 1.8
SMG5-204ENST00000476954 CDK13Q14004 1512 aaKnown RBP26.3■■□□□ 1.8
SMG5-204ENST00000476954 IQSEC2Q5JU85 1478 aa26.29■■□□□ 1.8
SMG5-204ENST00000476954 NCOA1Q15788 1441 aa26.22■■□□□ 1.79
SMG5-204ENST00000476954 MYO5CQ9NQX4 1742 aa26.22■■□□□ 1.79
SMG5-204ENST00000476954 DIP2CQ9Y2E4 1556 aa26.21■■□□□ 1.79
SMG5-204ENST00000476954 AFAP1Q8N556 730 aa26.2■■□□□ 1.78
SMG5-204ENST00000476954 EFCAB2Q5VUJ9 269 aa26.19■■□□□ 1.78
SMG5-204ENST00000476954 CSRNP3Q8WYN3 585 aa26.19■■□□□ 1.78
SMG5-204ENST00000476954 UBAP1LF5GYI3 381 aa26.18■■□□□ 1.78
SMG5-204ENST00000476954 KDM5CP41229 1560 aa26.18■■□□□ 1.78
SMG5-204ENST00000476954 ABCA6Q8N139 1617 aa26.16■■□□□ 1.78
SMG5-204ENST00000476954 ZNF518AQ6AHZ1 1483 aa26.16■■□□□ 1.78
SMG5-204ENST00000476954 TRAPPC8Q9Y2L5 1435 aa26.15■■□□□ 1.78
SMG5-204ENST00000476954 MYT1LQ9UL68 1186 aa26.15■■□□□ 1.78
SMG5-204ENST00000476954 ZNF335Q9H4Z2 1342 aaPredicted RBP26.14■■□□□ 1.78
SMG5-204ENST00000476954 KIF14Q15058 1648 aa26.14■■□□□ 1.77
SMG5-204ENST00000476954 CAMSAP1Q5T5Y3 1602 aa26.14■■□□□ 1.77
SMG5-204ENST00000476954 REREQ9P2R6 1566 aa26.12■■□□□ 1.77
SMG5-204ENST00000476954 NCKAP5LQ9HCH0 1330 aa26.1■■□□□ 1.77
SMG5-204ENST00000476954 ARHGAP5Q13017 1502 aa26.08■■□□□ 1.77
SMG5-204ENST00000476954 ESF1Q9H501 851 aaKnown RBP26.07■■□□□ 1.76
SMG5-204ENST00000476954 MED1Q15648 1581 aaPredicted RBP26.07■■□□□ 1.76
SMG5-204ENST00000476954 AGLP35573 1532 aa26.05■■□□□ 1.76
SMG5-204ENST00000476954 ATP1B4Q9UN42 357 aaPredicted RBP26.03■■□□□ 1.76
SMG5-204ENST00000476954 MLH3Q9UHC1 1453 aa26.03■■□□□ 1.76
SMG5-204ENST00000476954 HSPA1LP34931 641 aa26■■□□□ 1.75
SMG5-204ENST00000476954 CDC42BPBQ9Y5S2 1711 aa26■■□□□ 1.75
SMG5-204ENST00000476954 CNTLNQ9NXG0 1405 aa25.97■■□□□ 1.75
SMG5-204ENST00000476954 KIDINS220Q9ULH0 1771 aa25.96■■□□□ 1.75
SMG5-204ENST00000476954 MROH2AA6NES4 1674 aa25.95■■□□□ 1.74
SMG5-204ENST00000476954 NPATQ14207 1427 aa25.95■■□□□ 1.74
SMG5-204ENST00000476954 SUPT6HQ7KZ85 1726 aaKnown RBP25.94■■□□□ 1.74
SMG5-204ENST00000476954 SCAF1Q9H7N4 1312 aaKnown RBP25.94■■□□□ 1.74
SMG5-204ENST00000476954 ITSN2Q9NZM3 1697 aa25.93■■□□□ 1.74
SMG5-204ENST00000476954 TROQ12816 1431 aaPredicted RBP25.93■■□□□ 1.74
SMG5-204ENST00000476954 PIP4K2BP78356 416 aa25.92■■□□□ 1.74
SMG5-204ENST00000476954 ABCC1P33527 1531 aa25.92■■□□□ 1.74
SMG5-204ENST00000476954 MYO3AQ8NEV4 1616 aa25.92■■□□□ 1.74
SMG5-204ENST00000476954 ZNF142P52746 1687 aaPredicted RBP25.91■■□□□ 1.74
SMG5-204ENST00000476954 ZMYM3Q14202 1370 aa25.91■■□□□ 1.74
SMG5-204ENST00000476954 LRRIQ1Q96JM4 1722 aa25.91■■□□□ 1.74
SMG5-204ENST00000476954 CDK11AQ9UQ88 783 aaPredicted RBP25.89■■□□□ 1.74
SMG5-204ENST00000476954 TCOF1Q13428 1488 aaKnown RBP25.89■■□□□ 1.73
SMG5-204ENST00000476954 PLA2R1Q13018 1463 aa25.88■■□□□ 1.73
SMG5-204ENST00000476954 CLTCQ00610 1675 aaKnown RBP25.87■■□□□ 1.73
SMG5-204ENST00000476954 PKD2Q13563 968 aa25.87■■□□□ 1.73
SMG5-204ENST00000476954 PREX2Q70Z35 1606 aa25.87■■□□□ 1.73
SMG5-204ENST00000476954 CEP170BQ9Y4F5 1589 aaPredicted RBP25.86■■□□□ 1.73
SMG5-204ENST00000476954 PPP6R1Q9UPN7 881 aa25.84■■□□□ 1.73
SMG5-204ENST00000476954 CLIP1P30622 1438 aa25.83■■□□□ 1.73
SMG5-204ENST00000476954 FMN1Q68DA7 1419 aa25.82■■□□□ 1.72
SMG5-204ENST00000476954 EEA1Q15075 1411 aa25.8■■□□□ 1.72
SMG5-204ENST00000476954 PTPRKQ15262 1439 aa25.8■■□□□ 1.72
SMG5-204ENST00000476954 PHF23Q9BUL5 403 aaPredicted RBP25.8■■□□□ 1.72
SMG5-204ENST00000476954 SAMD9LQ8IVG5 1584 aa25.78■■□□□ 1.72
SMG5-204ENST00000476954 EHMT2Q96KQ7 1210 aa25.78■■□□□ 1.72
SMG5-204ENST00000476954 ARHGAP35Q9NRY4 1499 aa25.78■■□□□ 1.72
SMG5-204ENST00000476954 CDC42BPAQ5VT25 1732 aa25.76■■□□□ 1.71
SMG5-204ENST00000476954 TOM1O60784 492 aa25.75■■□□□ 1.71
SMG5-204ENST00000476954 ALKQ9UM73 1620 aa25.74■■□□□ 1.71
SMG5-204ENST00000476954 DNMT1P26358 1616 aaKnown RBP25.71■■□□□ 1.71
SMG5-204ENST00000476954 SENP3Q9H4L4 574 aaPredicted RBP25.71■■□□□ 1.71
SMG5-204ENST00000476954 CPS1P31327 1500 aa25.71■■□□□ 1.71
SMG5-204ENST00000476954 NEURL4Q96JN8 1562 aa25.7■■□□□ 1.71
SMG5-204ENST00000476954 POLR1AO95602 1720 aaPredicted RBP25.7■■□□□ 1.7
SMG5-204ENST00000476954 SHANK2Q9UPX8 1470 aa25.7■■□□□ 1.7
SMG5-204ENST00000476954 ZNF777Q9ULD5 760 aaPredicted RBP25.69■■□□□ 1.7
SMG5-204ENST00000476954 PLXNC1O60486 1568 aa25.69■■□□□ 1.7
SMG5-204ENST00000476954 SYCP2Q9BX26 1530 aa25.68■■□□□ 1.7
SMG5-204ENST00000476954 A2ML1A8K2U0 1454 aa25.68■■□□□ 1.7
SMG5-204ENST00000476954 SPAG9O60271 1321 aaKnown RBP25.67■■□□□ 1.7
SMG5-204ENST00000476954 GGT6Q6P531 493 aa25.67■■□□□ 1.7
SMG5-204ENST00000476954 ATP7AQ04656 1500 aa25.66■■□□□ 1.7
SMG5-204ENST00000476954 HNRNPMP52272 730 aaKnown RBP eCLIP25.65■■□□□ 1.7
SMG5-204ENST00000476954 A2MP01023 1474 aa25.64■■□□□ 1.69
SMG5-204ENST00000476954 UBTFP17480 764 aaKnown RBP25.63■■□□□ 1.69
SMG5-204ENST00000476954 VWDEQ8N2E2 1590 aa25.63■■□□□ 1.69
SMG5-204ENST00000476954 INO80Q9ULG1 1556 aaPredicted RBP25.62■■□□□ 1.69
SMG5-204ENST00000476954 RGS17Q9UGC6 210 aaPredicted RBP25.59■■□□□ 1.69
SMG5-204ENST00000476954 FBXO31Q5XUX0 539 aaPredicted RBP25.55■■□□□ 1.68
SMG5-204ENST00000476954 GPATCH8Q9UKJ3 1502 aaKnown RBP25.54■■□□□ 1.68
SMG5-204ENST00000476954 STRCP1A6NGW2 1772 aa25.54■■□□□ 1.68
SMG5-204ENST00000476954 CCDC18Q5T9S5 1454 aa25.53■■□□□ 1.68
SMG5-204ENST00000476954 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms