RNA–Protein interactions for RNA: ENST00000476448.1

MCM3-204, Transcript of minichromosome maintenance complex component 3, humanhuman

TSL 2

Gene MCM3, Length 982 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-204ENST00000476448 TTC37Q6PGP7 1564 aa23.74■■□□□ 1.39
MCM3-204ENST00000476448 SCAPERQ9BY12 1400 aa23.73■■□□□ 1.39
MCM3-204ENST00000476448 ARHGEF12Q9NZN5 1544 aa23.71■■□□□ 1.39
MCM3-204ENST00000476448 CFAP74Q9C0B2 1584 aa23.69■■□□□ 1.38
MCM3-204ENST00000476448 FER1L4A9Z1Z3 1794 aa23.68■■□□□ 1.38
MCM3-204ENST00000476448 ATP10AO60312 1499 aa23.68■■□□□ 1.38
MCM3-204ENST00000476448 PLCH2O75038 1416 aa23.67■■□□□ 1.38
MCM3-204ENST00000476448 STRCQ7RTU9 1775 aa23.65■■□□□ 1.38
MCM3-204ENST00000476448 DMRT2Q9Y5R5 561 aa23.64■■□□□ 1.37
MCM3-204ENST00000476448 C9orf84Q5VXU9 1444 aa23.63■■□□□ 1.37
MCM3-204ENST00000476448 CDK13Q14004 1512 aaKnown RBP23.63■■□□□ 1.37
MCM3-204ENST00000476448 PREX1Q8TCU6 1659 aa23.61■■□□□ 1.37
MCM3-204ENST00000476448 AFAP1Q8N556 730 aa23.58■■□□□ 1.37
MCM3-204ENST00000476448 EFCAB2Q5VUJ9 269 aa23.57■■□□□ 1.36
MCM3-204ENST00000476448 UHRF1BP1Q6BDS2 1440 aa23.56■■□□□ 1.36
MCM3-204ENST00000476448 SPATA31D1Q6ZQQ2 1576 aa23.53■■□□□ 1.36
MCM3-204ENST00000476448 PTPRTO14522 1441 aa23.53■■□□□ 1.36
MCM3-204ENST00000476448 LTBP4Q8N2S1 1624 aa23.51■■□□□ 1.35
MCM3-204ENST00000476448 ATP1B4Q9UN42 357 aaPredicted RBP23.47■■□□□ 1.35
MCM3-204ENST00000476448 ZNF518AQ6AHZ1 1483 aa23.46■■□□□ 1.35
MCM3-204ENST00000476448 KDM5CP41229 1560 aa23.44■■□□□ 1.34
MCM3-204ENST00000476448 MYT1LQ9UL68 1186 aa23.44■■□□□ 1.34
MCM3-204ENST00000476448 DIP2CQ9Y2E4 1556 aa23.44■■□□□ 1.34
MCM3-204ENST00000476448 KIF14Q15058 1648 aa23.42■■□□□ 1.34
MCM3-204ENST00000476448 EEA1Q15075 1411 aa23.42■■□□□ 1.34
MCM3-204ENST00000476448 SETD1BQ9UPS6 1966 aaKnown RBP23.41■■□□□ 1.34
MCM3-204ENST00000476448 TRAPPC8Q9Y2L5 1435 aa23.41■■□□□ 1.34
MCM3-204ENST00000476448 C3P01024 1663 aa23.4■■□□□ 1.34
MCM3-204ENST00000476448 NCOA1Q15788 1441 aa23.4■■□□□ 1.34
MCM3-204ENST00000476448 MYO5CQ9NQX4 1742 aa23.39■■□□□ 1.34
MCM3-204ENST00000476448 REREQ9P2R6 1566 aa23.38■■□□□ 1.33
MCM3-204ENST00000476448 ARHGAP5Q13017 1502 aa23.38■■□□□ 1.33
MCM3-204ENST00000476448 MLH3Q9UHC1 1453 aa23.37■■□□□ 1.33
MCM3-204ENST00000476448 CDK11AQ9UQ88 783 aaPredicted RBP23.37■■□□□ 1.33
MCM3-204ENST00000476448 ABCA6Q8N139 1617 aa23.37■■□□□ 1.33
MCM3-204ENST00000476448 IQSEC2Q5JU85 1478 aa23.36■■□□□ 1.33
MCM3-204ENST00000476448 TROQ12816 1431 aaPredicted RBP23.36■■□□□ 1.33
MCM3-204ENST00000476448 EHMT2Q96KQ7 1210 aa23.35■■□□□ 1.33
MCM3-204ENST00000476448 AGLP35573 1532 aa23.34■■□□□ 1.33
MCM3-204ENST00000476448 ESF1Q9H501 851 aaKnown RBP23.34■■□□□ 1.33
MCM3-204ENST00000476448 NCKAP5LQ9HCH0 1330 aa23.33■■□□□ 1.33
MCM3-204ENST00000476448 ZNF335Q9H4Z2 1342 aaPredicted RBP23.33■■□□□ 1.32
MCM3-204ENST00000476448 FMN1Q68DA7 1419 aa23.32■■□□□ 1.32
MCM3-204ENST00000476448 ARHGAP35Q9NRY4 1499 aa23.31■■□□□ 1.32
MCM3-204ENST00000476448 UBAP1LF5GYI3 381 aa23.3■■□□□ 1.32
MCM3-204ENST00000476448 CAMSAP1Q5T5Y3 1602 aa23.28■■□□□ 1.32
MCM3-204ENST00000476448 CNTLNQ9NXG0 1405 aa23.25■■□□□ 1.31
MCM3-204ENST00000476448 CDC42BPBQ9Y5S2 1711 aa23.25■■□□□ 1.31
MCM3-204ENST00000476448 UBTFP17480 764 aaKnown RBP23.25■■□□□ 1.31
MCM3-204ENST00000476448 ZMYM3Q14202 1370 aa23.25■■□□□ 1.31
MCM3-204ENST00000476448 CLIP1P30622 1438 aa23.25■■□□□ 1.31
MCM3-204ENST00000476448 ABCC1P33527 1531 aa23.24■■□□□ 1.31
MCM3-204ENST00000476448 NPATQ14207 1427 aa23.22■■□□□ 1.31
MCM3-204ENST00000476448 KIDINS220Q9ULH0 1771 aa23.22■■□□□ 1.31
MCM3-204ENST00000476448 LRRIQ1Q96JM4 1722 aa23.19■■□□□ 1.3
MCM3-204ENST00000476448 ITSN2Q9NZM3 1697 aa23.17■■□□□ 1.3
MCM3-204ENST00000476448 PREX2Q70Z35 1606 aa23.16■■□□□ 1.3
MCM3-204ENST00000476448 PKD2Q13563 968 aa23.15■■□□□ 1.3
MCM3-204ENST00000476448 TCOF1Q13428 1488 aaKnown RBP23.14■■□□□ 1.29
MCM3-204ENST00000476448 HSPA1LP34931 641 aa23.14■■□□□ 1.29
MCM3-204ENST00000476448 ZNF777Q9ULD5 760 aaPredicted RBP23.13■■□□□ 1.29
MCM3-204ENST00000476448 PTPRKQ15262 1439 aa23.13■■□□□ 1.29
MCM3-204ENST00000476448 SAMD9LQ8IVG5 1584 aa23.13■■□□□ 1.29
MCM3-204ENST00000476448 PLA2R1Q13018 1463 aa23.12■■□□□ 1.29
MCM3-204ENST00000476448 HNRNPMP52272 730 aaKnown RBP eCLIP23.12■■□□□ 1.29
MCM3-204ENST00000476448 MROH2AA6NES4 1674 aa23.11■■□□□ 1.29
MCM3-204ENST00000476448 SPAG9O60271 1321 aaKnown RBP23.1■■□□□ 1.29
MCM3-204ENST00000476448 PPP6R1Q9UPN7 881 aa23.09■■□□□ 1.29
MCM3-204ENST00000476448 PIP4K2BP78356 416 aa23.07■■□□□ 1.28
MCM3-204ENST00000476448 GGT6Q6P531 493 aa23.07■■□□□ 1.28
MCM3-204ENST00000476448 CEP170BQ9Y4F5 1589 aaPredicted RBP23.06■■□□□ 1.28
MCM3-204ENST00000476448 MYO3AQ8NEV4 1616 aa23.06■■□□□ 1.28
MCM3-204ENST00000476448 CLTCQ00610 1675 aaKnown RBP23.05■■□□□ 1.28
MCM3-204ENST00000476448 CASKIN1Q8WXD9 1431 aa23.05■■□□□ 1.28
MCM3-204ENST00000476448 MED1Q15648 1581 aaPredicted RBP23.05■■□□□ 1.28
MCM3-204ENST00000476448 SCAF1Q9H7N4 1312 aaKnown RBP23.05■■□□□ 1.28
MCM3-204ENST00000476448 CDC42BPAQ5VT25 1732 aa23.05■■□□□ 1.28
MCM3-204ENST00000476448 SUPT6HQ7KZ85 1726 aaKnown RBP23.05■■□□□ 1.28
MCM3-204ENST00000476448 SYCP2Q9BX26 1530 aa23.04■■□□□ 1.28
MCM3-204ENST00000476448 ZNF142P52746 1687 aaPredicted RBP23.03■■□□□ 1.28
MCM3-204ENST00000476448 GPATCH8Q9UKJ3 1502 aaKnown RBP23.03■■□□□ 1.28
MCM3-204ENST00000476448 A2MP01023 1474 aa23.02■■□□□ 1.28
MCM3-204ENST00000476448 PLXNC1O60486 1568 aa23.01■■□□□ 1.27
MCM3-204ENST00000476448 CCDC18Q5T9S5 1454 aa23■■□□□ 1.27
MCM3-204ENST00000476448 ATP7AQ04656 1500 aa22.99■■□□□ 1.27
MCM3-204ENST00000476448 TOM1O60784 492 aa22.98■■□□□ 1.27
MCM3-204ENST00000476448 A2ML1A8K2U0 1454 aa22.97■■□□□ 1.27
MCM3-204ENST00000476448 FBXO31Q5XUX0 539 aaPredicted RBP22.96■■□□□ 1.27
MCM3-204ENST00000476448 KIAA1107Q9UPP5 1409 aa22.96■■□□□ 1.27
MCM3-204ENST00000476448 DNMT1P26358 1616 aaKnown RBP22.95■■□□□ 1.26
MCM3-204ENST00000476448 INO80Q9ULG1 1556 aaPredicted RBP22.94■■□□□ 1.26
MCM3-204ENST00000476448 SHANK2Q9UPX8 1470 aa22.94■■□□□ 1.26
MCM3-204ENST00000476448 CFDP1Q9UEE9 299 aaPredicted RBP22.93■■□□□ 1.26
MCM3-204ENST00000476448 NEURL4Q96JN8 1562 aa22.92■■□□□ 1.26
MCM3-204ENST00000476448 ZNF644Q9H582 1327 aaPredicted RBP22.91■■□□□ 1.26
MCM3-204ENST00000476448 ALKQ9UM73 1620 aa22.91■■□□□ 1.26
MCM3-204ENST00000476448 CPS1P31327 1500 aa22.91■■□□□ 1.26
MCM3-204ENST00000476448 PHF23Q9BUL5 403 aaPredicted RBP22.87■■□□□ 1.25
MCM3-204ENST00000476448 TNRQ92752 1358 aa22.87■■□□□ 1.25
MCM3-204ENST00000476448 PLEKHH2Q8IVE3 1493 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms