RNA–Protein interactions for RNA: ENST00000476241.2

HNRNPU-209, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,844 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-209ENST00000476241 DEKP35659 375 aaKnown RBP20.88■□□□□ 0.93
HNRNPU-209ENST00000476241 PTPRGP23470 1445 aa20.87■□□□□ 0.93
HNRNPU-209ENST00000476241 NEUROD2Q15784 382 aa20.87■□□□□ 0.93
HNRNPU-209ENST00000476241 PKD2Q13563 968 aa20.87■□□□□ 0.93
HNRNPU-209ENST00000476241 FAM69CQ0P6D2 419 aa20.85■□□□□ 0.93
HNRNPU-209ENST00000476241 NUDCQ9Y266 331 aa20.85■□□□□ 0.93
HNRNPU-209ENST00000476241 MS4A1P11836 297 aa20.85■□□□□ 0.93
HNRNPU-209ENST00000476241 RUSC2Q8N2Y8 1516 aa20.84■□□□□ 0.93
HNRNPU-209ENST00000476241 FOXD1Q16676 465 aa20.84■□□□□ 0.93
HNRNPU-209ENST00000476241 FRAT1Q92837 279 aaPredicted RBP20.84■□□□□ 0.93
HNRNPU-209ENST00000476241 RALBP1Q15311 655 aa20.83■□□□□ 0.93
HNRNPU-209ENST00000476241 MAPK8IP3Q9UPT6 1336 aa20.82■□□□□ 0.92
HNRNPU-209ENST00000476241 KTN1Q86UP2 1357 aaKnown RBP20.81■□□□□ 0.92
HNRNPU-209ENST00000476241 TCERG1O14776 1098 aaKnown RBP20.81■□□□□ 0.92
HNRNPU-209ENST00000476241 KIF3BO15066 747 aa20.81■□□□□ 0.92
HNRNPU-209ENST00000476241 L3MBTL2Q969R5 705 aa20.81■□□□□ 0.92
HNRNPU-209ENST00000476241 RCAN3Q9UKA8 241 aa20.81■□□□□ 0.92
HNRNPU-209ENST00000476241 NCLP19338 710 aaKnown RBP20.8■□□□□ 0.92
HNRNPU-209ENST00000476241 CHMP4BQ9H444 224 aaKnown RBP20.79■□□□□ 0.92
HNRNPU-209ENST00000476241 SPAG9O60271 1321 aaKnown RBP20.77■□□□□ 0.92
HNRNPU-209ENST00000476241 RTN4Q9NQC3 1192 aaKnown RBP20.74■□□□□ 0.91
HNRNPU-209ENST00000476241 CASC1Q6TDU7 716 aa20.74■□□□□ 0.91
HNRNPU-209ENST00000476241 EID1Q9Y6B2 187 aa20.73■□□□□ 0.91
HNRNPU-209ENST00000476241 FHOD3Q2V2M9 1422 aa20.72■□□□□ 0.91
HNRNPU-209ENST00000476241 WASHC2CQ9Y4E1 1318 aa20.72■□□□□ 0.91
HNRNPU-209ENST00000476241 TNNT2P45379 298 aaPredicted RBP20.71■□□□□ 0.91
HNRNPU-209ENST00000476241 HNRNPMP52272 730 aaKnown RBP eCLIP20.71■□□□□ 0.912e-10■■□□□ 11.9
HNRNPU-209ENST00000476241 ANKRD30AQ9BXX3 1397 aa20.71■□□□□ 0.91
HNRNPU-209ENST00000476241 NUP155O75694 1391 aa20.7■□□□□ 0.9
HNRNPU-209ENST00000476241 PDE3BQ13370 1112 aa20.7■□□□□ 0.9
HNRNPU-209ENST00000476241 IPO9Q96P70 1041 aaKnown RBP20.69■□□□□ 0.9
HNRNPU-209ENST00000476241 ROCK2O75116 1388 aaKnown RBP20.69■□□□□ 0.9
HNRNPU-209ENST00000476241 GAPVD1Q14C86 1478 aa20.69■□□□□ 0.9
HNRNPU-209ENST00000476241 PNNQ9H307 717 aaKnown RBP20.69■□□□□ 0.9
HNRNPU-209ENST00000476241 RSPH4AQ5TD94 716 aa20.68■□□□□ 0.9
HNRNPU-209ENST00000476241 NLRP13Q86W25 1043 aa20.68■□□□□ 0.9
HNRNPU-209ENST00000476241 AQRO60306 1485 aaKnown RBP eCLIP20.67■□□□□ 0.91e-7■■■■□ 22.9
HNRNPU-209ENST00000476241 U2SURPO15042 1029 aaKnown RBP20.66■□□□□ 0.9
HNRNPU-209ENST00000476241 SAFB2Q14151 953 aaKnown RBP eCLIP20.65■□□□□ 0.9
HNRNPU-209ENST00000476241 CC2D2AQ9P2K1 1620 aa20.65■□□□□ 0.9
HNRNPU-209ENST00000476241 STK26Q9P289 416 aa20.65■□□□□ 0.9
HNRNPU-209ENST00000476241 L1TD1Q5T7N2 865 aaKnown RBP20.64■□□□□ 0.89
HNRNPU-209ENST00000476241 MORC1Q86VD1 984 aa20.64■□□□□ 0.89
HNRNPU-209ENST00000476241 PRKRIP1Q9H875 184 aaPredicted RBP20.64■□□□□ 0.89
HNRNPU-209ENST00000476241 HSP90AB1P08238 724 aaKnown RBP20.64■□□□□ 0.89
HNRNPU-209ENST00000476241 RAD54L2Q9Y4B4 1467 aa20.63■□□□□ 0.89
HNRNPU-209ENST00000476241 PTMAP06454 111 aaKnown RBP20.62■□□□□ 0.89
HNRNPU-209ENST00000476241 HSCBQ8IWL3 235 aa20.62■□□□□ 0.89
HNRNPU-209ENST00000476241 FGD5Q6ZNL6 1462 aa20.61■□□□□ 0.89
HNRNPU-209ENST00000476241 NAP1L5Q96NT1 182 aaPredicted RBP20.61■□□□□ 0.89
HNRNPU-209ENST00000476241 SRPK2P78362 688 aaKnown RBP20.6■□□□□ 0.89
HNRNPU-209ENST00000476241 NESP48681 1621 aa20.6■□□□□ 0.89
HNRNPU-209ENST00000476241 ZBED9Q6R2W3 1325 aa20.6■□□□□ 0.89
HNRNPU-209ENST00000476241 SOX12O15370 315 aa20.58■□□□□ 0.89
HNRNPU-209ENST00000476241 CCDC18Q5T9S5 1454 aa20.57■□□□□ 0.88
HNRNPU-209ENST00000476241 PHLDB1Q86UU1 1377 aa20.56■□□□□ 0.88
HNRNPU-209ENST00000476241 GOLGA2Q08379 1002 aa20.55■□□□□ 0.88
HNRNPU-209ENST00000476241 FANCIQ9NVI1 1328 aa20.55■□□□□ 0.88
HNRNPU-209ENST00000476241 KIF15Q9NS87 1388 aa20.55■□□□□ 0.88
HNRNPU-209ENST00000476241 CFAP44Q96MT7 982 aa20.53■□□□□ 0.88
HNRNPU-209ENST00000476241 RWDD1Q9H446 243 aaPredicted RBP20.53■□□□□ 0.88
HNRNPU-209ENST00000476241 MYBBP1AQ9BQG0 1328 aaKnown RBP20.53■□□□□ 0.88
HNRNPU-209ENST00000476241 MRC2Q9UBG0 1479 aa20.53■□□□□ 0.88
HNRNPU-209ENST00000476241 IPO8O15397 1037 aaKnown RBP20.52■□□□□ 0.88
HNRNPU-209ENST00000476241 PAK3O75914 559 aaPredicted RBP20.52■□□□□ 0.88
HNRNPU-209ENST00000476241 DNTTIP2Q5QJE6 756 aaKnown RBP20.51■□□□□ 0.87
HNRNPU-209ENST00000476241 NPHP1O15259 732 aa20.5■□□□□ 0.87
HNRNPU-209ENST00000476241 CCDC9Q9Y3X0 531 aaKnown RBP20.5■□□□□ 0.87
HNRNPU-209ENST00000476241 KIF21BO75037 1637 aa20.5■□□□□ 0.87
HNRNPU-209ENST00000476241 USP35Q9P2H5 1018 aa20.5■□□□□ 0.87
HNRNPU-209ENST00000476241 ST20-MTHFSA0A0A6YYL1 179 aa20.48■□□□□ 0.87
HNRNPU-209ENST00000476241 PMFBP1Q8TBY8 1022 aa20.48■□□□□ 0.87
HNRNPU-209ENST00000476241 IGF1RP08069 1367 aa20.48■□□□□ 0.87
HNRNPU-209ENST00000476241 GRIN2BQ13224 1484 aa20.47■□□□□ 0.87
HNRNPU-209ENST00000476241 U2AF1L5P0DN76 240 aaPredicted RBP20.46■□□□□ 0.87
HNRNPU-209ENST00000476241 U2AF1Q01081 240 aaKnown RBP eCLIP20.46■□□□□ 0.872e-8■■■□□ 17.8
HNRNPU-209ENST00000476241 EIF3AQ14152 1382 aaKnown RBP20.45■□□□□ 0.86
HNRNPU-209ENST00000476241 NUTM2DQ5VT03 806 aaPredicted RBP20.44■□□□□ 0.86
HNRNPU-209ENST00000476241 SLKQ9H2G2 1235 aaPredicted RBP20.44■□□□□ 0.86
HNRNPU-209ENST00000476241 SPRYD3Q8NCJ5 442 aa20.43■□□□□ 0.86
HNRNPU-209ENST00000476241 ZRSR1Q15695 479 aaKnown RBP20.43■□□□□ 0.86
HNRNPU-209ENST00000476241 PDE4AP27815 886 aa20.43■□□□□ 0.86
HNRNPU-209ENST00000476241 CSB-PGBD3P0DP91 1061 aa20.42■□□□□ 0.86
HNRNPU-209ENST00000476241 GBP4Q96PP9 640 aa20.42■□□□□ 0.86
HNRNPU-209ENST00000476241 PTMSP20962 102 aa20.42■□□□□ 0.86
HNRNPU-209ENST00000476241 RRP1P56182 461 aaKnown RBP20.42■□□□□ 0.86
HNRNPU-209ENST00000476241 USP47Q96K76 1375 aa20.42■□□□□ 0.86
HNRNPU-209ENST00000476241 UACAQ9BZF9 1416 aa20.41■□□□□ 0.86
HNRNPU-209ENST00000476241 CFTRP13569 1480 aa20.41■□□□□ 0.86
HNRNPU-209ENST00000476241 IFT140Q96RY7 1462 aa20.41■□□□□ 0.86
HNRNPU-209ENST00000476241 CALD1Q05682 793 aaKnown RBP20.4■□□□□ 0.86
HNRNPU-209ENST00000476241 FGD6Q6ZV73 1430 aa20.4■□□□□ 0.86
HNRNPU-209ENST00000476241 CENPQQ7L2Z9 268 aaPredicted RBP20.4■□□□□ 0.86
HNRNPU-209ENST00000476241 CENPJQ9HC77 1338 aaPredicted RBP20.39■□□□□ 0.85
HNRNPU-209ENST00000476241 HDGFL2Q7Z4V5 671 aaPredicted RBP20.38■□□□□ 0.85
HNRNPU-209ENST00000476241 EXOC6Q8TAG9 804 aa20.38■□□□□ 0.85
HNRNPU-209ENST00000476241 MCCP23508 829 aa20.37■□□□□ 0.85
HNRNPU-209ENST00000476241 PRG4Q92954 1404 aaPredicted RBP20.37■□□□□ 0.85
HNRNPU-209ENST00000476241 RRBP1Q9P2E9 1410 aaKnown RBP20.37■□□□□ 0.85
HNRNPU-209ENST00000476241 MSNP26038 577 aaKnown RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms