RNA–Protein interactions for RNA: ENST00000474691.1

EPCAM-205, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 714 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-205ENST00000474691 TTC37Q6PGP7 1564 aa22.72■■□□□ 1.23
EPCAM-205ENST00000474691 MAGI2Q86UL8 1455 aa22.72■■□□□ 1.23
EPCAM-205ENST00000474691 RIMS1Q86UR5 1692 aaKnown RBP22.71■■□□□ 1.23
EPCAM-205ENST00000474691 RICTORQ6R327 1708 aa22.71■■□□□ 1.23
EPCAM-205ENST00000474691 PLCH2O75038 1416 aa22.71■■□□□ 1.23
EPCAM-205ENST00000474691 YEATS2Q9ULM3 1422 aa22.68■■□□□ 1.22
EPCAM-205ENST00000474691 HSPA2P54652 639 aa22.68■■□□□ 1.22
EPCAM-205ENST00000474691 HECW1Q76N89 1606 aa22.68■■□□□ 1.22
EPCAM-205ENST00000474691 ZMYM4Q5VZL5 1548 aa22.67■■□□□ 1.22
EPCAM-205ENST00000474691 LMTK3Q96Q04 1460 aa22.66■■□□□ 1.22
EPCAM-205ENST00000474691 CLIP1P30622 1438 aa22.65■■□□□ 1.22
EPCAM-205ENST00000474691 ATP10AO60312 1499 aa22.61■■□□□ 1.21
EPCAM-205ENST00000474691 ARHGAP35Q9NRY4 1499 aa22.6■■□□□ 1.21
EPCAM-205ENST00000474691 C9orf84Q5VXU9 1444 aa22.59■■□□□ 1.21
EPCAM-205ENST00000474691 ESF1Q9H501 851 aaKnown RBP22.59■■□□□ 1.21
EPCAM-205ENST00000474691 ARHGAP5Q13017 1502 aa22.58■■□□□ 1.21
EPCAM-205ENST00000474691 KIF14Q15058 1648 aa22.58■■□□□ 1.21
EPCAM-205ENST00000474691 MYO5CQ9NQX4 1742 aa22.58■■□□□ 1.21
EPCAM-205ENST00000474691 TROQ12816 1431 aaPredicted RBP22.57■■□□□ 1.2
EPCAM-205ENST00000474691 ZNF518AQ6AHZ1 1483 aa22.56■■□□□ 1.2
EPCAM-205ENST00000474691 AFAP1Q8N556 730 aa22.55■■□□□ 1.2
EPCAM-205ENST00000474691 FER1L4A9Z1Z3 1794 aa22.55■■□□□ 1.2
EPCAM-205ENST00000474691 CEBPAP49715 358 aaPredicted RBP22.52■■□□□ 1.2
EPCAM-205ENST00000474691 CERKQ8TCT0 537 aa22.49■■□□□ 1.19
EPCAM-205ENST00000474691 DMRT2Q9Y5R5 561 aa22.49■■□□□ 1.19
EPCAM-205ENST00000474691 ARHGEF12Q9NZN5 1544 aa22.47■■□□□ 1.19
EPCAM-205ENST00000474691 SIGLEC1Q9BZZ2 1709 aa22.47■■□□□ 1.19
EPCAM-205ENST00000474691 CCDC18Q5T9S5 1454 aa22.45■■□□□ 1.18
EPCAM-205ENST00000474691 UHRF1BP1Q6BDS2 1440 aa22.44■■□□□ 1.18
EPCAM-205ENST00000474691 ZNF777Q9ULD5 760 aaPredicted RBP22.44■■□□□ 1.18
EPCAM-205ENST00000474691 CASKIN1Q8WXD9 1431 aa22.41■■□□□ 1.18
EPCAM-205ENST00000474691 KDM5CP41229 1560 aa22.41■■□□□ 1.18
EPCAM-205ENST00000474691 PREX1Q8TCU6 1659 aa22.39■■□□□ 1.18
EPCAM-205ENST00000474691 MLH3Q9UHC1 1453 aa22.38■■□□□ 1.17
EPCAM-205ENST00000474691 DIP2CQ9Y2E4 1556 aa22.36■■□□□ 1.17
EPCAM-205ENST00000474691 TRAPPC8Q9Y2L5 1435 aa22.35■■□□□ 1.17
EPCAM-205ENST00000474691 CDC42BPBQ9Y5S2 1711 aa22.34■■□□□ 1.17
EPCAM-205ENST00000474691 PREX2Q70Z35 1606 aa22.33■■□□□ 1.17
EPCAM-205ENST00000474691 ABCC1P33527 1531 aa22.32■■□□□ 1.16
EPCAM-205ENST00000474691 REREQ9P2R6 1566 aa22.32■■□□□ 1.16
EPCAM-205ENST00000474691 LRRIQ1Q96JM4 1722 aa22.31■■□□□ 1.16
EPCAM-205ENST00000474691 SETD1BQ9UPS6 1966 aaKnown RBP22.31■■□□□ 1.16
EPCAM-205ENST00000474691 SPAG9O60271 1321 aaKnown RBP22.31■■□□□ 1.16
EPCAM-205ENST00000474691 FYCO1Q9BQS8 1478 aa22.3■■□□□ 1.16
EPCAM-205ENST00000474691 ABCA6Q8N139 1617 aa22.3■■□□□ 1.16
EPCAM-205ENST00000474691 CNTLNQ9NXG0 1405 aa22.3■■□□□ 1.16
EPCAM-205ENST00000474691 CFDP1Q9UEE9 299 aaPredicted RBP22.29■■□□□ 1.16
EPCAM-205ENST00000474691 AGLP35573 1532 aa22.29■■□□□ 1.16
EPCAM-205ENST00000474691 HNRNPMP52272 730 aaKnown RBP eCLIP22.28■■□□□ 1.16
EPCAM-205ENST00000474691 ITSN2Q9NZM3 1697 aa22.27■■□□□ 1.16
EPCAM-205ENST00000474691 CCNB3Q8WWL7 1395 aa22.25■■□□□ 1.15
EPCAM-205ENST00000474691 MTUS2Q5JR59 1369 aa22.24■■□□□ 1.15
EPCAM-205ENST00000474691 C3P01024 1663 aa22.23■■□□□ 1.15
EPCAM-205ENST00000474691 CDC42BPAQ5VT25 1732 aa22.22■■□□□ 1.15
EPCAM-205ENST00000474691 PTPRTO14522 1441 aa22.22■■□□□ 1.15
EPCAM-205ENST00000474691 PLEKHH2Q8IVE3 1493 aa22.22■■□□□ 1.15
EPCAM-205ENST00000474691 SYCP2Q9BX26 1530 aa22.21■■□□□ 1.15
EPCAM-205ENST00000474691 KIDINS220Q9ULH0 1771 aa22.2■■□□□ 1.14
EPCAM-205ENST00000474691 GGT6Q6P531 493 aa22.2■■□□□ 1.14
EPCAM-205ENST00000474691 GPATCH8Q9UKJ3 1502 aaKnown RBP22.2■■□□□ 1.14
EPCAM-205ENST00000474691 SAMD9LQ8IVG5 1584 aa22.2■■□□□ 1.14
EPCAM-205ENST00000474691 ZMYM3Q14202 1370 aa22.19■■□□□ 1.14
EPCAM-205ENST00000474691 STRCQ7RTU9 1775 aa22.18■■□□□ 1.14
EPCAM-205ENST00000474691 KIAA1107Q9UPP5 1409 aa22.16■■□□□ 1.14
EPCAM-205ENST00000474691 DISP3Q9P2K9 1392 aa22.16■■□□□ 1.14
EPCAM-205ENST00000474691 NPATQ14207 1427 aa22.15■■□□□ 1.14
EPCAM-205ENST00000474691 ATP7AQ04656 1500 aa22.14■■□□□ 1.13
EPCAM-205ENST00000474691 SUPT6HQ7KZ85 1726 aaKnown RBP22.13■■□□□ 1.13
EPCAM-205ENST00000474691 A2MP01023 1474 aa22.13■■□□□ 1.13
EPCAM-205ENST00000474691 NCOA1Q15788 1441 aa22.12■■□□□ 1.13
EPCAM-205ENST00000474691 PPP6R1Q9UPN7 881 aa22.11■■□□□ 1.13
EPCAM-205ENST00000474691 NCKAP5LQ9HCH0 1330 aa22.09■■□□□ 1.13
EPCAM-205ENST00000474691 CAMSAP1Q5T5Y3 1602 aa22.09■■□□□ 1.13
EPCAM-205ENST00000474691 MROH2AA6NES4 1674 aa22.08■■□□□ 1.13
EPCAM-205ENST00000474691 PKD2Q13563 968 aa22.08■■□□□ 1.13
EPCAM-205ENST00000474691 ZNF644Q9H582 1327 aaPredicted RBP22.05■■□□□ 1.12
EPCAM-205ENST00000474691 CLTCQ00610 1675 aaKnown RBP22.04■■□□□ 1.12
EPCAM-205ENST00000474691 INO80Q9ULG1 1556 aaPredicted RBP22.03■■□□□ 1.12
EPCAM-205ENST00000474691 EHBP1L1Q8N3D4 1523 aa22.02■■□□□ 1.12
EPCAM-205ENST00000474691 IQSEC2Q5JU85 1478 aa22.02■■□□□ 1.12
EPCAM-205ENST00000474691 UBAP1LF5GYI3 381 aa22.01■■□□□ 1.11
EPCAM-205ENST00000474691 PTPRKQ15262 1439 aa22■■□□□ 1.11
EPCAM-205ENST00000474691 KIF3BO15066 747 aa22■■□□□ 1.11
EPCAM-205ENST00000474691 RSPH4AQ5TD94 716 aa22■■□□□ 1.11
EPCAM-205ENST00000474691 ZNF335Q9H4Z2 1342 aaPredicted RBP22■■□□□ 1.11
EPCAM-205ENST00000474691 PLXNC1O60486 1568 aa21.99■■□□□ 1.11
EPCAM-205ENST00000474691 LTBP4Q8N2S1 1624 aa21.99■■□□□ 1.11
EPCAM-205ENST00000474691 RTEL1-TNFRSF6BF6WH68 1400 aa21.99■■□□□ 1.11
EPCAM-205ENST00000474691 ADGBQ8N7X0 1667 aa21.99■■□□□ 1.11
EPCAM-205ENST00000474691 PLA2R1Q13018 1463 aa21.98■■□□□ 1.11
EPCAM-205ENST00000474691 TSPY4P0CV99 314 aa21.98■■□□□ 1.11
EPCAM-205ENST00000474691 TSPY10P0CW01 314 aa21.98■■□□□ 1.11
EPCAM-205ENST00000474691 DHX29Q7Z478 1369 aaKnown RBP21.98■■□□□ 1.11
EPCAM-205ENST00000474691 CEP162Q5TB80 1403 aa21.97■■□□□ 1.11
EPCAM-205ENST00000474691 TIAM1Q13009 1591 aa21.96■■□□□ 1.11
EPCAM-205ENST00000474691 CEP170BQ9Y4F5 1589 aaPredicted RBP21.96■■□□□ 1.11
EPCAM-205ENST00000474691 MYO3AQ8NEV4 1616 aa21.96■■□□□ 1.11
EPCAM-205ENST00000474691 WASHC2CQ9Y4E1 1318 aa21.96■■□□□ 1.11
EPCAM-205ENST00000474691 ILDR2Q71H61 639 aa21.94■■□□□ 1.1
EPCAM-205ENST00000474691 MBD5Q9P267 1494 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms