RNA–Protein interactions for RNA: ENST00000474642.1

RTN4R-206, Transcript of reticulon 4 receptor, humanhuman

TSL 4

Gene RTN4R, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-206ENST00000474642 TTC37Q6PGP7 1564 aa22.47■■□□□ 1.19
RTN4R-206ENST00000474642 HECW1Q76N89 1606 aa22.46■■□□□ 1.19
RTN4R-206ENST00000474642 DMRT2Q9Y5R5 561 aa22.46■■□□□ 1.19
RTN4R-206ENST00000474642 SCAPERQ9BY12 1400 aa22.44■■□□□ 1.18
RTN4R-206ENST00000474642 CEBPAP49715 358 aaPredicted RBP22.43■■□□□ 1.18
RTN4R-206ENST00000474642 PREX1Q8TCU6 1659 aa22.42■■□□□ 1.18
RTN4R-206ENST00000474642 ATP10AO60312 1499 aa22.41■■□□□ 1.18
RTN4R-206ENST00000474642 ARHGEF12Q9NZN5 1544 aa22.41■■□□□ 1.18
RTN4R-206ENST00000474642 C9orf84Q5VXU9 1444 aa22.39■■□□□ 1.17
RTN4R-206ENST00000474642 PLCH2O75038 1416 aa22.38■■□□□ 1.17
RTN4R-206ENST00000474642 SETD1BQ9UPS6 1966 aaKnown RBP22.36■■□□□ 1.17
RTN4R-206ENST00000474642 STRCQ7RTU9 1775 aa22.35■■□□□ 1.17
RTN4R-206ENST00000474642 UHRF1BP1Q6BDS2 1440 aa22.35■■□□□ 1.17
RTN4R-206ENST00000474642 EFCAB2Q5VUJ9 269 aa22.34■■□□□ 1.17
RTN4R-206ENST00000474642 CDK13Q14004 1512 aaKnown RBP22.33■■□□□ 1.17
RTN4R-206ENST00000474642 MYT1LQ9UL68 1186 aa22.32■■□□□ 1.16
RTN4R-206ENST00000474642 SPATA31D1Q6ZQQ2 1576 aa22.31■■□□□ 1.16
RTN4R-206ENST00000474642 ATP1B4Q9UN42 357 aaPredicted RBP22.29■■□□□ 1.16
RTN4R-206ENST00000474642 PTPRTO14522 1441 aa22.27■■□□□ 1.16
RTN4R-206ENST00000474642 AFAP1Q8N556 730 aa22.25■■□□□ 1.15
RTN4R-206ENST00000474642 ZNF518AQ6AHZ1 1483 aa22.25■■□□□ 1.15
RTN4R-206ENST00000474642 MYO5CQ9NQX4 1742 aa22.25■■□□□ 1.15
RTN4R-206ENST00000474642 ESF1Q9H501 851 aaKnown RBP22.24■■□□□ 1.15
RTN4R-206ENST00000474642 CDK11AQ9UQ88 783 aaPredicted RBP22.24■■□□□ 1.15
RTN4R-206ENST00000474642 EEA1Q15075 1411 aa22.23■■□□□ 1.15
RTN4R-206ENST00000474642 ARHGAP5Q13017 1502 aa22.18■■□□□ 1.14
RTN4R-206ENST00000474642 LTBP4Q8N2S1 1624 aa22.17■■□□□ 1.14
RTN4R-206ENST00000474642 KDM5CP41229 1560 aa22.17■■□□□ 1.14
RTN4R-206ENST00000474642 C3P01024 1663 aa22.17■■□□□ 1.14
RTN4R-206ENST00000474642 TRAPPC8Q9Y2L5 1435 aa22.16■■□□□ 1.14
RTN4R-206ENST00000474642 DIP2CQ9Y2E4 1556 aa22.16■■□□□ 1.14
RTN4R-206ENST00000474642 IQSEC2Q5JU85 1478 aa22.15■■□□□ 1.14
RTN4R-206ENST00000474642 KIF14Q15058 1648 aa22.14■■□□□ 1.14
RTN4R-206ENST00000474642 FMN1Q68DA7 1419 aa22.14■■□□□ 1.13
RTN4R-206ENST00000474642 REREQ9P2R6 1566 aa22.13■■□□□ 1.13
RTN4R-206ENST00000474642 NCOA1Q15788 1441 aa22.12■■□□□ 1.13
RTN4R-206ENST00000474642 CLIP1P30622 1438 aa22.11■■□□□ 1.13
RTN4R-206ENST00000474642 TROQ12816 1431 aaPredicted RBP22.11■■□□□ 1.13
RTN4R-206ENST00000474642 MLH3Q9UHC1 1453 aa22.1■■□□□ 1.13
RTN4R-206ENST00000474642 ABCA6Q8N139 1617 aa22.1■■□□□ 1.13
RTN4R-206ENST00000474642 AGLP35573 1532 aa22.09■■□□□ 1.13
RTN4R-206ENST00000474642 CNTLNQ9NXG0 1405 aa22.08■■□□□ 1.13
RTN4R-206ENST00000474642 UBAP1LF5GYI3 381 aa22.07■■□□□ 1.12
RTN4R-206ENST00000474642 UBTFP17480 764 aaKnown RBP22.07■■□□□ 1.12
RTN4R-206ENST00000474642 EHMT2Q96KQ7 1210 aa22.07■■□□□ 1.12
RTN4R-206ENST00000474642 CAMSAP1Q5T5Y3 1602 aa22.04■■□□□ 1.12
RTN4R-206ENST00000474642 NCKAP5LQ9HCH0 1330 aa22.03■■□□□ 1.12
RTN4R-206ENST00000474642 CDC42BPBQ9Y5S2 1711 aa22.03■■□□□ 1.12
RTN4R-206ENST00000474642 ZNF335Q9H4Z2 1342 aaPredicted RBP22.02■■□□□ 1.12
RTN4R-206ENST00000474642 NPATQ14207 1427 aa22.01■■□□□ 1.11
RTN4R-206ENST00000474642 ARHGAP35Q9NRY4 1499 aa22.01■■□□□ 1.11
RTN4R-206ENST00000474642 ABCC1P33527 1531 aa21.99■■□□□ 1.11
RTN4R-206ENST00000474642 ZMYM3Q14202 1370 aa21.99■■□□□ 1.11
RTN4R-206ENST00000474642 KIDINS220Q9ULH0 1771 aa21.97■■□□□ 1.11
RTN4R-206ENST00000474642 ITSN2Q9NZM3 1697 aa21.97■■□□□ 1.11
RTN4R-206ENST00000474642 PREX2Q70Z35 1606 aa21.96■■□□□ 1.11
RTN4R-206ENST00000474642 PKD2Q13563 968 aa21.96■■□□□ 1.11
RTN4R-206ENST00000474642 MROH2AA6NES4 1674 aa21.95■■□□□ 1.1
RTN4R-206ENST00000474642 LRRIQ1Q96JM4 1722 aa21.93■■□□□ 1.1
RTN4R-206ENST00000474642 ZNF777Q9ULD5 760 aaPredicted RBP21.92■■□□□ 1.1
RTN4R-206ENST00000474642 SCAF1Q9H7N4 1312 aaKnown RBP21.9■■□□□ 1.1
RTN4R-206ENST00000474642 PLA2R1Q13018 1463 aa21.9■■□□□ 1.1
RTN4R-206ENST00000474642 SPAG9O60271 1321 aaKnown RBP21.89■■□□□ 1.1
RTN4R-206ENST00000474642 SUPT6HQ7KZ85 1726 aaKnown RBP21.89■■□□□ 1.09
RTN4R-206ENST00000474642 SAMD9LQ8IVG5 1584 aa21.88■■□□□ 1.09
RTN4R-206ENST00000474642 PPP6R1Q9UPN7 881 aa21.88■■□□□ 1.09
RTN4R-206ENST00000474642 ZNF142P52746 1687 aaPredicted RBP21.85■■□□□ 1.09
RTN4R-206ENST00000474642 CLTCQ00610 1675 aaKnown RBP21.85■■□□□ 1.09
RTN4R-206ENST00000474642 TCOF1Q13428 1488 aaKnown RBP21.85■■□□□ 1.09
RTN4R-206ENST00000474642 CCDC18Q5T9S5 1454 aa21.85■■□□□ 1.09
RTN4R-206ENST00000474642 MYO3AQ8NEV4 1616 aa21.85■■□□□ 1.09
RTN4R-206ENST00000474642 HSPA1LP34931 641 aa21.85■■□□□ 1.09
RTN4R-206ENST00000474642 HNRNPMP52272 730 aaKnown RBP eCLIP21.85■■□□□ 1.09
RTN4R-206ENST00000474642 PIP4K2BP78356 416 aa21.85■■□□□ 1.09
RTN4R-206ENST00000474642 CEP170BQ9Y4F5 1589 aaPredicted RBP21.85■■□□□ 1.09
RTN4R-206ENST00000474642 CDC42BPAQ5VT25 1732 aa21.85■■□□□ 1.09
RTN4R-206ENST00000474642 GGT6Q6P531 493 aa21.84■■□□□ 1.09
RTN4R-206ENST00000474642 PTPRKQ15262 1439 aa21.83■■□□□ 1.09
RTN4R-206ENST00000474642 SYCP2Q9BX26 1530 aa21.82■■□□□ 1.08
RTN4R-206ENST00000474642 TOM1O60784 492 aa21.82■■□□□ 1.08
RTN4R-206ENST00000474642 MED1Q15648 1581 aaPredicted RBP21.81■■□□□ 1.08
RTN4R-206ENST00000474642 CASKIN1Q8WXD9 1431 aa21.8■■□□□ 1.08
RTN4R-206ENST00000474642 A2MP01023 1474 aa21.79■■□□□ 1.08
RTN4R-206ENST00000474642 ATP7AQ04656 1500 aa21.79■■□□□ 1.08
RTN4R-206ENST00000474642 PHF23Q9BUL5 403 aaPredicted RBP21.76■■□□□ 1.07
RTN4R-206ENST00000474642 GPATCH8Q9UKJ3 1502 aaKnown RBP21.75■■□□□ 1.07
RTN4R-206ENST00000474642 PLXNC1O60486 1568 aa21.75■■□□□ 1.07
RTN4R-206ENST00000474642 CFDP1Q9UEE9 299 aaPredicted RBP21.75■■□□□ 1.07
RTN4R-206ENST00000474642 A2ML1A8K2U0 1454 aa21.75■■□□□ 1.07
RTN4R-206ENST00000474642 KIAA1107Q9UPP5 1409 aa21.73■■□□□ 1.07
RTN4R-206ENST00000474642 PLEKHH2Q8IVE3 1493 aa21.73■■□□□ 1.07
RTN4R-206ENST00000474642 CPS1P31327 1500 aa21.73■■□□□ 1.07
RTN4R-206ENST00000474642 INO80Q9ULG1 1556 aaPredicted RBP21.72■■□□□ 1.07
RTN4R-206ENST00000474642 DNMT1P26358 1616 aaKnown RBP21.72■■□□□ 1.07
RTN4R-206ENST00000474642 SHANK2Q9UPX8 1470 aa21.7■■□□□ 1.06
RTN4R-206ENST00000474642 CCNB3Q8WWL7 1395 aa21.68■■□□□ 1.06
RTN4R-206ENST00000474642 FYCO1Q9BQS8 1478 aa21.68■■□□□ 1.06
RTN4R-206ENST00000474642 POLR1AO95602 1720 aaPredicted RBP21.66■■□□□ 1.06
RTN4R-206ENST00000474642 ADGBQ8N7X0 1667 aa21.66■■□□□ 1.06
RTN4R-206ENST00000474642 TNRQ92752 1358 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms