RNA–Protein interactions for RNA: ENST00000474171.1

RPL13A-205, Transcript of ribosomal protein L13a, humanhuman

TSL 2

Gene RPL13A, Length 521 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-205ENST00000474171 YEATS2Q9ULM3 1422 aa18.29■□□□□ 0.52
RPL13A-205ENST00000474171 MADDQ8WXG6 1647 aa18.28■□□□□ 0.52
RPL13A-205ENST00000474171 SCAPERQ9BY12 1400 aa18.28■□□□□ 0.52
RPL13A-205ENST00000474171 CCDC18Q5T9S5 1454 aa18.27■□□□□ 0.52
RPL13A-205ENST00000474171 FYCO1Q9BQS8 1478 aa18.26■□□□□ 0.51
RPL13A-205ENST00000474171 POGZQ7Z3K3 1410 aa18.26■□□□□ 0.51
RPL13A-205ENST00000474171 ZFYVE16Q7Z3T8 1539 aa18.26■□□□□ 0.51
RPL13A-205ENST00000474171 CDC42BPAQ5VT25 1732 aa18.26■□□□□ 0.51
RPL13A-205ENST00000474171 ARHGAP5Q13017 1502 aa18.25■□□□□ 0.51
RPL13A-205ENST00000474171 PREX2Q70Z35 1606 aa18.25■□□□□ 0.51
RPL13A-205ENST00000474171 RIMS1Q86UR5 1692 aaKnown RBP18.23■□□□□ 0.51
RPL13A-205ENST00000474171 PTPRMP28827 1452 aa18.23■□□□□ 0.51
RPL13A-205ENST00000474171 EFCAB2Q5VUJ9 269 aa18.23■□□□□ 0.51
RPL13A-205ENST00000474171 ARID4BQ4LE39 1312 aaPredicted RBP18.23■□□□□ 0.51
RPL13A-205ENST00000474171 MAGI2Q86UL8 1455 aa18.2■□□□□ 0.5
RPL13A-205ENST00000474171 ITSN2Q9NZM3 1697 aa18.19■□□□□ 0.5
RPL13A-205ENST00000474171 KDM5CP41229 1560 aa18.19■□□□□ 0.5
RPL13A-205ENST00000474171 ARHGEF12Q9NZN5 1544 aa18.18■□□□□ 0.5
RPL13A-205ENST00000474171 ABCC1P33527 1531 aa18.17■□□□□ 0.5
RPL13A-205ENST00000474171 AFAP1Q8N556 730 aa18.16■□□□□ 0.5
RPL13A-205ENST00000474171 FER1L4A9Z1Z3 1794 aa18.16■□□□□ 0.5
RPL13A-205ENST00000474171 CEP162Q5TB80 1403 aa18.15■□□□□ 0.5
RPL13A-205ENST00000474171 ZNF518AQ6AHZ1 1483 aa18.15■□□□□ 0.5
RPL13A-205ENST00000474171 ABCA6Q8N139 1617 aa18.14■□□□□ 0.49
RPL13A-205ENST00000474171 TRAPPC8Q9Y2L5 1435 aa18.14■□□□□ 0.49
RPL13A-205ENST00000474171 ATP10AO60312 1499 aa18.14■□□□□ 0.49
RPL13A-205ENST00000474171 SAMD9LQ8IVG5 1584 aa18.13■□□□□ 0.49
RPL13A-205ENST00000474171 DIP2CQ9Y2E4 1556 aa18.13■□□□□ 0.49
RPL13A-205ENST00000474171 MLECQ14165 292 aa18.12■□□□□ 0.49
RPL13A-205ENST00000474171 C9orf84Q5VXU9 1444 aa18.11■□□□□ 0.49
RPL13A-205ENST00000474171 GPATCH8Q9UKJ3 1502 aaKnown RBP18.11■□□□□ 0.49
RPL13A-205ENST00000474171 KIDINS220Q9ULH0 1771 aa18.11■□□□□ 0.49
RPL13A-205ENST00000474171 LOC105371045A0A1W2PR82 267 aa18.1■□□□□ 0.49
RPL13A-205ENST00000474171 SYCP2Q9BX26 1530 aa18.08■□□□□ 0.48
RPL13A-205ENST00000474171 MLH3Q9UHC1 1453 aa18.07■□□□□ 0.48
RPL13A-205ENST00000474171 PLPPR3Q6T4P5 718 aa18.07■□□□□ 0.48
RPL13A-205ENST00000474171 ZNF777Q9ULD5 760 aaPredicted RBP18.06■□□□□ 0.48
RPL13A-205ENST00000474171 LMTK3Q96Q04 1460 aa18.06■□□□□ 0.48
RPL13A-205ENST00000474171 TIAM1Q13009 1591 aa18.05■□□□□ 0.48
RPL13A-205ENST00000474171 REREQ9P2R6 1566 aa18.05■□□□□ 0.48
RPL13A-205ENST00000474171 MTUS2Q5JR59 1369 aa18.04■□□□□ 0.48
RPL13A-205ENST00000474171 EHBP1L1Q8N3D4 1523 aa18.04■□□□□ 0.48
RPL13A-205ENST00000474171 MYT1LQ9UL68 1186 aa18.04■□□□□ 0.48
RPL13A-205ENST00000474171 HNRNPMP52272 730 aaKnown RBP eCLIP18.02■□□□□ 0.48
RPL13A-205ENST00000474171 CCNB3Q8WWL7 1395 aa18.02■□□□□ 0.47
RPL13A-205ENST00000474171 CFDP1Q9UEE9 299 aaPredicted RBP17.99■□□□□ 0.47
RPL13A-205ENST00000474171 INO80Q9ULG1 1556 aaPredicted RBP17.99■□□□□ 0.47
RPL13A-205ENST00000474171 AGLP35573 1532 aa17.98■□□□□ 0.47
RPL13A-205ENST00000474171 SUPT6HQ7KZ85 1726 aaKnown RBP17.98■□□□□ 0.47
RPL13A-205ENST00000474171 ZNF644Q9H582 1327 aaPredicted RBP17.98■□□□□ 0.47
RPL13A-205ENST00000474171 C3P01024 1663 aa17.97■□□□□ 0.47
RPL13A-205ENST00000474171 CEBPAP49715 358 aaPredicted RBP17.97■□□□□ 0.47
RPL13A-205ENST00000474171 HSPA2P54652 639 aa17.96■□□□□ 0.47
RPL13A-205ENST00000474171 ATP7AQ04656 1500 aa17.96■□□□□ 0.47
RPL13A-205ENST00000474171 KIAA1107Q9UPP5 1409 aa17.96■□□□□ 0.47
RPL13A-205ENST00000474171 PREX1Q8TCU6 1659 aa17.96■□□□□ 0.47
RPL13A-205ENST00000474171 VPS8Q8N3P4 1428 aa17.95■□□□□ 0.46
RPL13A-205ENST00000474171 PLEKHH2Q8IVE3 1493 aa17.95■□□□□ 0.46
RPL13A-205ENST00000474171 SPAG9O60271 1321 aaKnown RBP17.94■□□□□ 0.46
RPL13A-205ENST00000474171 NCOA2Q15596 1464 aa17.94■□□□□ 0.46
RPL13A-205ENST00000474171 ILDR1Q86SU0 546 aaPredicted RBP17.93■□□□□ 0.46
RPL13A-205ENST00000474171 MBD5Q9P267 1494 aa17.92■□□□□ 0.46
RPL13A-205ENST00000474171 PLXNC1O60486 1568 aa17.91■□□□□ 0.46
RPL13A-205ENST00000474171 ADGBQ8N7X0 1667 aa17.9■□□□□ 0.46
RPL13A-205ENST00000474171 SETD1BQ9UPS6 1966 aaKnown RBP17.9■□□□□ 0.46
RPL13A-205ENST00000474171 CAMSAP2Q08AD1 1489 aa17.88■□□□□ 0.45
RPL13A-205ENST00000474171 LRRC9Q6ZRR7 1453 aa17.88■□□□□ 0.45
RPL13A-205ENST00000474171 CLTCQ00610 1675 aaKnown RBP17.87■□□□□ 0.45
RPL13A-205ENST00000474171 A2MP01023 1474 aa17.87■□□□□ 0.45
RPL13A-205ENST00000474171 KANK4Q5T7N3 995 aaPredicted RBP17.86■□□□□ 0.45
RPL13A-205ENST00000474171 MROH2AA6NES4 1674 aa17.86■□□□□ 0.45
RPL13A-205ENST00000474171 STRCQ7RTU9 1775 aa17.86■□□□□ 0.45
RPL13A-205ENST00000474171 MAP3K1Q13233 1512 aa17.82■□□□□ 0.44
RPL13A-205ENST00000474171 CCDC141Q6ZP82 1450 aa17.82■□□□□ 0.44
RPL13A-205ENST00000474171 RTEL1-TNFRSF6BF6WH68 1400 aa17.81■□□□□ 0.44
RPL13A-205ENST00000474171 CNTLNQ9NXG0 1405 aa17.81■□□□□ 0.44
RPL13A-205ENST00000474171 ARHGEF5Q12774 1597 aa17.8■□□□□ 0.44
RPL13A-205ENST00000474171 ESF1Q9H501 851 aaKnown RBP17.8■□□□□ 0.44
RPL13A-205ENST00000474171 UHRF1BP1Q6BDS2 1440 aa17.8■□□□□ 0.44
RPL13A-205ENST00000474171 ZMYM3Q14202 1370 aa17.78■□□□□ 0.44
RPL13A-205ENST00000474171 GGT6Q6P531 493 aa17.77■□□□□ 0.44
RPL13A-205ENST00000474171 DHX29Q7Z478 1369 aaKnown RBP17.75■□□□□ 0.43
RPL13A-205ENST00000474171 MYOM3Q5VTT5 1437 aa17.73■□□□□ 0.43
RPL13A-205ENST00000474171 MYO3AQ8NEV4 1616 aa17.73■□□□□ 0.43
RPL13A-205ENST00000474171 NPATQ14207 1427 aa17.72■□□□□ 0.43
RPL13A-205ENST00000474171 MAST1Q9Y2H9 1570 aa17.72■□□□□ 0.43
RPL13A-205ENST00000474171 PTPRKQ15262 1439 aa17.72■□□□□ 0.43
RPL13A-205ENST00000474171 ZNF142P52746 1687 aaPredicted RBP17.71■□□□□ 0.42
RPL13A-205ENST00000474171 RSPH4AQ5TD94 716 aa17.7■□□□□ 0.42
RPL13A-205ENST00000474171 CROCC2H7BZ55 1655 aa17.69■□□□□ 0.42
RPL13A-205ENST00000474171 KIF3BO15066 747 aa17.69■□□□□ 0.42
RPL13A-205ENST00000474171 FBXO41Q8TF61 875 aa17.69■□□□□ 0.42
RPL13A-205ENST00000474171 MIA2Q96PC5 1412 aa17.69■□□□□ 0.42
RPL13A-205ENST00000474171 CAMSAP1Q5T5Y3 1602 aa17.68■□□□□ 0.42
RPL13A-205ENST00000474171 PTPN23Q9H3S7 1636 aa17.68■□□□□ 0.42
RPL13A-205ENST00000474171 CEP170BQ9Y4F5 1589 aaPredicted RBP17.66■□□□□ 0.42
RPL13A-205ENST00000474171 TSPY4P0CV99 314 aa17.66■□□□□ 0.42
RPL13A-205ENST00000474171 TSPY10P0CW01 314 aa17.66■□□□□ 0.42
RPL13A-205ENST00000474171 KDM5DQ9BY66 1539 aa17.66■□□□□ 0.42
RPL13A-205ENST00000474171 RNF17Q9BXT8 1623 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms