RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 RIOK3O14730 519 aaKnown RBP10.82□□□□□ -0.68
RTF1-203ENST00000473214 HAP1P54257 671 aaPredicted RBP10.82□□□□□ -0.68
RTF1-203ENST00000473214 RNF25Q96BH1 459 aaPredicted RBP10.82□□□□□ -0.68
RTF1-203ENST00000473214 RIMBP2O15034 1052 aa10.81□□□□□ -0.68
RTF1-203ENST00000473214 VARS2Q5ST30 1063 aaKnown RBP10.8□□□□□ -0.68
RTF1-203ENST00000473214 TMEM92Q6UXU6 159 aa10.8□□□□□ -0.68
RTF1-203ENST00000473214 HOMEZQ8IX15 550 aa10.79□□□□□ -0.68
RTF1-203ENST00000473214 SOX12O15370 315 aa10.78□□□□□ -0.68
RTF1-203ENST00000473214 MICALL2Q8IY33 904 aa10.78□□□□□ -0.68
RTF1-203ENST00000473214 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.77□□□□□ -0.69
RTF1-203ENST00000473214 RNF166Q96A37 237 aaPredicted RBP10.77□□□□□ -0.69
RTF1-203ENST00000473214 ZFP91Q96JP5 570 aaPredicted RBP10.77□□□□□ -0.69
RTF1-203ENST00000473214 VGFO15240 615 aaPredicted RBP10.76□□□□□ -0.69
RTF1-203ENST00000473214 RANGAP1P46060 587 aaPredicted RBP10.76□□□□□ -0.69
RTF1-203ENST00000473214 ZSWIM6Q9HCJ5 1215 aa10.76□□□□□ -0.69
RTF1-203ENST00000473214 MS4A4AQ96JQ5 239 aa10.75□□□□□ -0.69
RTF1-203ENST00000473214 GPR153Q6NV75 609 aa10.74□□□□□ -0.69
RTF1-203ENST00000473214 ZNF687Q8N1G0 1237 aa10.73□□□□□ -0.69
RTF1-203ENST00000473214 MYT1LQ9UL68 1186 aa10.73□□□□□ -0.69
RTF1-203ENST00000473214 PHF8Q9UPP1 1060 aa10.72□□□□□ -0.69
RTF1-203ENST00000473214 ARSIQ5FYB1 569 aa10.66□□□□□ -0.7
RTF1-203ENST00000473214 FBXO22Q8NEZ5 403 aa10.64□□□□□ -0.71
RTF1-203ENST00000473214 NLRP6P59044 892 aa10.63□□□□□ -0.71
RTF1-203ENST00000473214 BCL11BQ9C0K0 894 aaPredicted RBP10.63□□□□□ -0.71
RTF1-203ENST00000473214 PTGER2P43116 358 aa10.62□□□□□ -0.71
RTF1-203ENST00000473214 ERICH6Q7L0X2 663 aa10.62□□□□□ -0.71
RTF1-203ENST00000473214 GTF3C3Q9Y5Q9 886 aa10.62□□□□□ -0.71
RTF1-203ENST00000473214 KHSRPQ92945 711 aaKnown RBP eCLIP10.61□□□□□ -0.71
RTF1-203ENST00000473214 ANKRD13DQ6ZTN6 518 aa10.6□□□□□ -0.71
RTF1-203ENST00000473214 ZNF316A6NFI3 1004 aaPredicted RBP10.59□□□□□ -0.71
RTF1-203ENST00000473214 VSIG10Q8N0Z9 540 aa10.58□□□□□ -0.72
RTF1-203ENST00000473214 MFRPQ9BY79 579 aa10.58□□□□□ -0.72
RTF1-203ENST00000473214 STK24Q9Y6E0 443 aa10.58□□□□□ -0.72
RTF1-203ENST00000473214 LSM11P83369 360 aaKnown RBP eCLIP10.54□□□□□ -0.72
RTF1-203ENST00000473214 STK25O00506 426 aa10.53□□□□□ -0.72
RTF1-203ENST00000473214 KIF3CO14782 793 aa10.53□□□□□ -0.72
RTF1-203ENST00000473214 ECM2O94769 699 aaPredicted RBP10.53□□□□□ -0.72
RTF1-203ENST00000473214 PKD2Q13563 968 aa10.49□□□□□ -0.73
RTF1-203ENST00000473214 C2orf72A6NCS6 295 aa10.48□□□□□ -0.73
RTF1-203ENST00000473214 NUDT7P0C024 238 aa10.48□□□□□ -0.73
RTF1-203ENST00000473214 RGL2O15211 777 aa10.47□□□□□ -0.73
RTF1-203ENST00000473214 TTBK1Q5TCY1 1321 aaPredicted RBP10.47□□□□□ -0.73
RTF1-203ENST00000473214 NISCHQ9Y2I1 1504 aa10.47□□□□□ -0.73
RTF1-203ENST00000473214 POTEEQ6S8J3 1075 aa10.46□□□□□ -0.73
RTF1-203ENST00000473214 PBX2P40425 430 aa10.45□□□□□ -0.74
RTF1-203ENST00000473214 PODXL2Q9NZ53 605 aa10.45□□□□□ -0.74
RTF1-203ENST00000473214 LHX6Q9UPM6 363 aa10.45□□□□□ -0.74
RTF1-203ENST00000473214 AXIN2Q9Y2T1 843 aa10.44□□□□□ -0.74
RTF1-203ENST00000473214 SLC34A2O95436 690 aa10.43□□□□□ -0.74
RTF1-203ENST00000473214 PCDHGA4Q9Y5G9 962 aa10.42□□□□□ -0.74
RTF1-203ENST00000473214 TMEM132AQ24JP5 1023 aa10.38□□□□□ -0.75
RTF1-203ENST00000473214 PPP1R37O75864 691 aa10.37□□□□□ -0.75
RTF1-203ENST00000473214 DCAF8L2P0C7V8 631 aa10.37□□□□□ -0.75
RTF1-203ENST00000473214 C14orf37Q86TY3 774 aa10.37□□□□□ -0.75
RTF1-203ENST00000473214 TMC2Q8TDI7 906 aa10.37□□□□□ -0.75
RTF1-203ENST00000473214 PLA2G2EQ9NZK7 142 aa10.37□□□□□ -0.75
RTF1-203ENST00000473214 HCSTQ9UBK5 93 aa10.36□□□□□ -0.75
RTF1-203ENST00000473214 MYT1Q01538 1121 aa10.35□□□□□ -0.75
RTF1-203ENST00000473214 ADGRD1Q6QNK2 874 aa10.34□□□□□ -0.75
RTF1-203ENST00000473214 ARHGAP33O14559 1287 aa10.33□□□□□ -0.76
RTF1-203ENST00000473214 KDM2AQ9Y2K7 1162 aa10.32□□□□□ -0.76
RTF1-203ENST00000473214 KDM4FA0A1W2PPD8 638 aa10.3□□□□□ -0.76
RTF1-203ENST00000473214 PSDA5PKW4 1024 aaPredicted RBP10.3□□□□□ -0.76
RTF1-203ENST00000473214 PTCD2Q8WV60 388 aaKnown RBP10.28□□□□□ -0.76
RTF1-203ENST00000473214 TK2O00142 265 aa10.27□□□□□ -0.77
RTF1-203ENST00000473214 HRO43593 1189 aa10.27□□□□□ -0.77
RTF1-203ENST00000473214 HS6ST3Q8IZP7 471 aa10.27□□□□□ -0.77
RTF1-203ENST00000473214 FOXK1P85037 733 aa10.26□□□□□ -0.77
RTF1-203ENST00000473214 DMRTA1Q5VZB9 504 aa10.26□□□□□ -0.77
RTF1-203ENST00000473214 PSEN2P49810 448 aa10.25□□□□□ -0.77
RTF1-203ENST00000473214 GPHNQ9NQX3 736 aaPredicted RBP10.24□□□□□ -0.77
RTF1-203ENST00000473214 PLPP6Q8IY26 295 aa10.22□□□□□ -0.77
RTF1-203ENST00000473214 NPM2Q86SE8 214 aaKnown RBP10.21□□□□□ -0.77
RTF1-203ENST00000473214 DSG2Q14126 1118 aa10.2□□□□□ -0.78
RTF1-203ENST00000473214 PPP4R3BQ5MIZ7 849 aa10.19□□□□□ -0.78
RTF1-203ENST00000473214 KCTD12Q96CX2 325 aaKnown RBP10.19□□□□□ -0.78
RTF1-203ENST00000473214 DNAJC5Q9H3Z4 198 aa10.18□□□□□ -0.78
RTF1-203ENST00000473214 TBC1D12O60347 775 aa10.16□□□□□ -0.78
RTF1-203ENST00000473214 STAC3Q96MF2 364 aa10.16□□□□□ -0.78
RTF1-203ENST00000473214 CHGAP10645 457 aaKnown RBP10.15□□□□□ -0.78
RTF1-203ENST00000473214 NKX1-1Q15270 411 aaPredicted RBP10.14□□□□□ -0.79
RTF1-203ENST00000473214 KCNK17Q96T54 332 aa10.12□□□□□ -0.79
RTF1-203ENST00000473214 OXER1Q8TDS5 423 aa10.11□□□□□ -0.79
RTF1-203ENST00000473214 KCNH8Q96L42 1107 aa10.1□□□□□ -0.79
RTF1-203ENST00000473214 VPS9D1Q9Y2B5 631 aa10.1□□□□□ -0.79
RTF1-203ENST00000473214 PTPN5P54829 565 aa10.09□□□□□ -0.79
RTF1-203ENST00000473214 NBR1Q14596 966 aa10.09□□□□□ -0.79
RTF1-203ENST00000473214 CRISPLD2Q9H0B8 497 aa10.09□□□□□ -0.79
RTF1-203ENST00000473214 RYDENQ9NUL5 291 aaKnown RBP10.09□□□□□ -0.79
RTF1-203ENST00000473214 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.09□□□□□ -0.79
RTF1-203ENST00000473214 SUPT5HO00267 1087 aaKnown RBP10.08□□□□□ -0.8
RTF1-203ENST00000473214 ABCC9O60706 1549 aa10.06□□□□□ -0.8
RTF1-203ENST00000473214 PAXIP1Q6ZW49 1069 aaPredicted RBP10.05□□□□□ -0.8
RTF1-203ENST00000473214 SLC4A5Q9BY07 1137 aa10.05□□□□□ -0.8
RTF1-203ENST00000473214 PPP1R15BQ5SWA1 713 aa10.04□□□□□ -0.8
RTF1-203ENST00000473214 IFFO2Q5TF58 517 aa10.04□□□□□ -0.8
RTF1-203ENST00000473214 UPF1Q92900 1129 aaKnown RBP eCLIP10.04□□□□□ -0.8
RTF1-203ENST00000473214 RGS20O76081 388 aa10.03□□□□□ -0.8
RTF1-203ENST00000473214 ZNF454Q8N9F8 522 aa10.03□□□□□ -0.8
RTF1-203ENST00000473214 CFAP44Q96MT7 982 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms