RNA–Protein interactions for RNA: ENST00000473118.5

TARDBP-205, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-205ENST00000473118 POTEIP0CG38 1075 aa13.3□□□□□ -0.28
TARDBP-205ENST00000473118 ASTLQ6HA08 431 aaPredicted RBP13.3□□□□□ -0.28
TARDBP-205ENST00000473118 RAD54L2Q9Y4B4 1467 aa13.29□□□□□ -0.28
TARDBP-205ENST00000473118 ABCA5Q8WWZ7 1642 aa13.28□□□□□ -0.28
TARDBP-205ENST00000473118 TRIM35Q9UPQ4 493 aa13.28□□□□□ -0.28
TARDBP-205ENST00000473118 STK25O00506 426 aa13.27□□□□□ -0.29
TARDBP-205ENST00000473118 SOGA1O94964 1423 aa13.27□□□□□ -0.29
TARDBP-205ENST00000473118 EIF4G3O43432 1585 aaKnown RBP13.26□□□□□ -0.29
TARDBP-205ENST00000473118 STK24Q9Y6E0 443 aa13.26□□□□□ -0.29
TARDBP-205ENST00000473118 CABP2Q9NPB3 220 aa13.25□□□□□ -0.29
TARDBP-205ENST00000473118 PBRM1Q86U86 1689 aa13.24□□□□□ -0.29
TARDBP-205ENST00000473118 ZNF608Q9ULD9 1512 aaPredicted RBP13.24□□□□□ -0.29
TARDBP-205ENST00000473118 BCL11BQ9C0K0 894 aaPredicted RBP13.24□□□□□ -0.29
TARDBP-205ENST00000473118 CHGAP10645 457 aaKnown RBP13.23□□□□□ -0.29
TARDBP-205ENST00000473118 PELP1Q8IZL8 1130 aaKnown RBP13.23□□□□□ -0.29
TARDBP-205ENST00000473118 MKRN3Q13064 507 aaKnown RBP13.22□□□□□ -0.29
TARDBP-205ENST00000473118 SLC39A7Q92504 469 aa13.2□□□□□ -0.3
TARDBP-205ENST00000473118 SEC24BO95487 1268 aa13.16□□□□□ -0.3
TARDBP-205ENST00000473118 C7P10643 843 aa13.16□□□□□ -0.3
TARDBP-205ENST00000473118 METRNQ9UJH8 293 aa13.16□□□□□ -0.3
TARDBP-205ENST00000473118 AQRO60306 1485 aaKnown RBP eCLIP13.16□□□□□ -0.32e-7■■□□□ 14.3
TARDBP-205ENST00000473118 GAPVD1Q14C86 1478 aa13.16□□□□□ -0.3
TARDBP-205ENST00000473118 ERICH3Q5RHP9 1530 aa13.15□□□□□ -0.3
TARDBP-205ENST00000473118 EFCAB3Q8N7B9 438 aa13.14□□□□□ -0.31
TARDBP-205ENST00000473118 TDRD9Q8NDG6 1382 aaKnown RBP13.14□□□□□ -0.31
TARDBP-205ENST00000473118 HS6ST3Q8IZP7 471 aa13.13□□□□□ -0.31
TARDBP-205ENST00000473118 RUSC2Q8N2Y8 1516 aa13.13□□□□□ -0.31
TARDBP-205ENST00000473118 GRIN2BQ13224 1484 aa13.12□□□□□ -0.31
TARDBP-205ENST00000473118 IER5LQ5T953 404 aa13.12□□□□□ -0.31
TARDBP-205ENST00000473118 KIF27Q86VH2 1401 aa13.12□□□□□ -0.31
TARDBP-205ENST00000473118 CUL7Q14999 1698 aa13.11□□□□□ -0.31
TARDBP-205ENST00000473118 ADAMTS12P58397 1594 aa13.11□□□□□ -0.31
TARDBP-205ENST00000473118 PLCG2P16885 1265 aa13.1□□□□□ -0.31
TARDBP-205ENST00000473118 MAGI1Q96QZ7 1491 aaPredicted RBP13.1□□□□□ -0.31
TARDBP-205ENST00000473118 CHD1O14646 1710 aa13.09□□□□□ -0.31
TARDBP-205ENST00000473118 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.09□□□□□ -0.314e-7■■□□□ 12.3
TARDBP-205ENST00000473118 EEA1Q15075 1411 aa13.08□□□□□ -0.32
TARDBP-205ENST00000473118 SNAPC4Q5SXM2 1469 aa13.07□□□□□ -0.32
TARDBP-205ENST00000473118 IGF1RP08069 1367 aa13.07□□□□□ -0.32
TARDBP-205ENST00000473118 SOX12O15370 315 aa13.05□□□□□ -0.32
TARDBP-205ENST00000473118 OCEL1Q9H607 264 aa13.05□□□□□ -0.32
TARDBP-205ENST00000473118 IRX5P78411 483 aaPredicted RBP13.03□□□□□ -0.32
TARDBP-205ENST00000473118 COLQQ9Y215 455 aaPredicted RBP13.03□□□□□ -0.32
TARDBP-205ENST00000473118 PHF8Q9UPP1 1060 aa13.02□□□□□ -0.33
TARDBP-205ENST00000473118 SYNJ2O15056 1496 aa13.02□□□□□ -0.33
TARDBP-205ENST00000473118 PRXQ9BXM0 1461 aa13.02□□□□□ -0.33
TARDBP-205ENST00000473118 FHAD1B1AJZ9 1412 aa13.01□□□□□ -0.33
TARDBP-205ENST00000473118 KIF21BO75037 1637 aa13.01□□□□□ -0.33
TARDBP-205ENST00000473118 NLRP6P59044 892 aa13□□□□□ -0.33
TARDBP-205ENST00000473118 GRIN2AQ12879 1464 aa12.98□□□□□ -0.33
TARDBP-205ENST00000473118 POTEFA5A3E0 1075 aa12.98□□□□□ -0.33
TARDBP-205ENST00000473118 G3V3G9 751 aa12.96□□□□□ -0.33
TARDBP-205ENST00000473118 CARMIL1Q5VZK9 1371 aa12.95□□□□□ -0.34
TARDBP-205ENST00000473118 BBXQ8WY36 941 aaPredicted RBP12.95□□□□□ -0.34
TARDBP-205ENST00000473118 MFRPQ9BY79 579 aa12.95□□□□□ -0.34
TARDBP-205ENST00000473118 RAPGEF2Q9Y4G8 1499 aa12.95□□□□□ -0.34
TARDBP-205ENST00000473118 CTTNBP2Q8WZ74 1663 aa12.95□□□□□ -0.34
TARDBP-205ENST00000473118 CEP170Q5SW79 1584 aa12.94□□□□□ -0.34
TARDBP-205ENST00000473118 LHX8Q68G74 356 aa12.94□□□□□ -0.34
TARDBP-205ENST00000473118 PDCD7Q8N8D1 485 aaKnown RBP12.94□□□□□ -0.34
TARDBP-205ENST00000473118 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.94□□□□□ -0.34
TARDBP-205ENST00000473118 NUP160Q12769 1436 aa12.94□□□□□ -0.34
TARDBP-205ENST00000473118 CLASP1Q7Z460 1538 aa12.93□□□□□ -0.34
TARDBP-205ENST00000473118 NKX1-1Q15270 411 aaPredicted RBP12.92□□□□□ -0.34
TARDBP-205ENST00000473118 DPY19L2Q6NUT2 758 aa12.92□□□□□ -0.34
TARDBP-205ENST00000473118 DNAJC5Q9H3Z4 198 aa12.92□□□□□ -0.34
TARDBP-205ENST00000473118 L3MBTL3Q96JM7 780 aaPredicted RBP12.91□□□□□ -0.34
TARDBP-205ENST00000473118 RYDENQ9NUL5 291 aaKnown RBP12.91□□□□□ -0.34
TARDBP-205ENST00000473118 SHROOM2Q13796 1616 aa12.89□□□□□ -0.35
TARDBP-205ENST00000473118 POTEB2H3BUK9 544 aa12.89□□□□□ -0.35
TARDBP-205ENST00000473118 FBXO22Q8NEZ5 403 aa12.89□□□□□ -0.35
TARDBP-205ENST00000473118 ILDR1Q86SU0 546 aaPredicted RBP12.88□□□□□ -0.35
TARDBP-205ENST00000473118 MS4A4AQ96JQ5 239 aa12.88□□□□□ -0.35
TARDBP-205ENST00000473118 CHMP7Q8WUX9 453 aaPredicted RBP12.85□□□□□ -0.35
TARDBP-205ENST00000473118 BOLA1Q9Y3E2 137 aa12.85□□□□□ -0.35
TARDBP-205ENST00000473118 GOLGA3Q08378 1498 aa12.85□□□□□ -0.35
TARDBP-205ENST00000473118 KIAA0586Q9BVV6 1533 aa12.84□□□□□ -0.35
TARDBP-205ENST00000473118 MAMSTRQ6ZN01 415 aa12.84□□□□□ -0.35
TARDBP-205ENST00000473118 FAM9AQ8IZU1 332 aaPredicted RBP12.84□□□□□ -0.35
TARDBP-205ENST00000473118 IQGAP2Q13576 1575 aa12.84□□□□□ -0.35
TARDBP-205ENST00000473118 CFAP44Q96MT7 982 aa12.83□□□□□ -0.36
TARDBP-205ENST00000473118 SCUBE2Q9NQ36 999 aa12.83□□□□□ -0.36
TARDBP-205ENST00000473118 GTPBP6O43824 516 aaPredicted RBP12.81□□□□□ -0.36
TARDBP-205ENST00000473118 C3orf67Q6ZVT6 689 aa12.81□□□□□ -0.36
TARDBP-205ENST00000473118 PAXIP1Q6ZW49 1069 aaPredicted RBP12.81□□□□□ -0.36
TARDBP-205ENST00000473118 SPRYD3Q8NCJ5 442 aa12.81□□□□□ -0.36
TARDBP-205ENST00000473118 UGGT2Q9NYU1 1516 aa12.8□□□□□ -0.36
TARDBP-205ENST00000473118 POTEJP0CG39 1038 aa12.8□□□□□ -0.36
TARDBP-205ENST00000473118 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.79□□□□□ -0.36
TARDBP-205ENST00000473118 PPP1R37O75864 691 aa12.78□□□□□ -0.36
TARDBP-205ENST00000473118 MICALL2Q8IY33 904 aa12.77□□□□□ -0.37
TARDBP-205ENST00000473118 SAMD9Q5K651 1589 aa12.77□□□□□ -0.37
TARDBP-205ENST00000473118 ERCC6L2Q5T890 1561 aa12.73□□□□□ -0.37
TARDBP-205ENST00000473118 DISP1Q96F81 1524 aa12.73□□□□□ -0.37
TARDBP-205ENST00000473118 TNIKQ9UKE5 1360 aa12.73□□□□□ -0.37
TARDBP-205ENST00000473118 KIAA0556O60303 1618 aa12.73□□□□□ -0.37
TARDBP-205ENST00000473118 OTUD5Q96G74 571 aa12.72□□□□□ -0.37
TARDBP-205ENST00000473118 RIMBP3CA6NJZ7 1639 aa12.72□□□□□ -0.37
TARDBP-205ENST00000473118 RIMBP3BA6NNM3 1639 aa12.72□□□□□ -0.37
TARDBP-205ENST00000473118 RIMBP3Q9UFD9 1639 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms