RNA–Protein interactions for RNA: ENST00000472441.1

TM4SF1-202, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2 BASIC

Gene TM4SF1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-202ENST00000472441 TCOF1Q13428 1488 aaKnown RBP6.99□□□□□ -1.29
TM4SF1-202ENST00000472441 HIRIP3Q9BW71 556 aaPredicted RBP6.99□□□□□ -1.29
TM4SF1-202ENST00000472441 UACAQ9BZF9 1416 aa6.99□□□□□ -1.29
TM4SF1-202ENST00000472441 OSCARQ8IYS5 282 aa6.99□□□□□ -1.29
TM4SF1-202ENST00000472441 FOXD1Q16676 465 aa6.98□□□□□ -1.29
TM4SF1-202ENST00000472441 TONSLQ96HA7 1378 aa6.98□□□□□ -1.29
TM4SF1-202ENST00000472441 ERCC6L2Q5T890 1561 aa6.98□□□□□ -1.29
TM4SF1-202ENST00000472441 ADCY10Q96PN6 1610 aa6.98□□□□□ -1.29
TM4SF1-202ENST00000472441 PPP1R15AO75807 674 aaPredicted RBP6.98□□□□□ -1.29
TM4SF1-202ENST00000472441 ATP10BO94823 1461 aa6.97□□□□□ -1.29
TM4SF1-202ENST00000472441 DAPK1P53355 1430 aa6.97□□□□□ -1.29
TM4SF1-202ENST00000472441 DNAJC5Q9H3Z4 198 aa6.97□□□□□ -1.29
TM4SF1-202ENST00000472441 ABCC5O15440 1437 aa6.97□□□□□ -1.29
TM4SF1-202ENST00000472441 CENPBP07199 599 aaPredicted RBP6.96□□□□□ -1.29
TM4SF1-202ENST00000472441 MPHOSPH9Q99550 1183 aa6.96□□□□□ -1.29
TM4SF1-202ENST00000472441 KIF14Q15058 1648 aa6.96□□□□□ -1.29
TM4SF1-202ENST00000472441 TIMELESSQ9UNS1 1208 aa6.96□□□□□ -1.3
TM4SF1-202ENST00000472441 ABCC2Q92887 1545 aa6.96□□□□□ -1.3
TM4SF1-202ENST00000472441 KCNH8Q96L42 1107 aa6.96□□□□□ -1.3
TM4SF1-202ENST00000472441 KDM6BO15054 1643 aa6.96□□□□□ -1.3
TM4SF1-202ENST00000472441 GPATCH8Q9UKJ3 1502 aaKnown RBP6.96□□□□□ -1.3
TM4SF1-202ENST00000472441 ACIN1Q9UKV3 1341 aaKnown RBP6.95□□□□□ -1.3
TM4SF1-202ENST00000472441 CAMSAP2Q08AD1 1489 aa6.94□□□□□ -1.3
TM4SF1-202ENST00000472441 HNRNPMP52272 730 aaKnown RBP eCLIP6.94□□□□□ -1.3
TM4SF1-202ENST00000472441 SLC4A1APQ9BWU0 796 aaKnown RBP6.94□□□□□ -1.3
TM4SF1-202ENST00000472441 ZCCHC11Q5TAX3 1644 aaKnown RBP6.94□□□□□ -1.3
TM4SF1-202ENST00000472441 DDX10Q13206 875 aaKnown RBP6.94□□□□□ -1.3
TM4SF1-202ENST00000472441 GLI2P10070 1586 aa6.94□□□□□ -1.3
TM4SF1-202ENST00000472441 SCAF1Q9H7N4 1312 aaKnown RBP6.94□□□□□ -1.3
TM4SF1-202ENST00000472441 TSPY4P0CV99 314 aa6.93□□□□□ -1.3
TM4SF1-202ENST00000472441 TSPY10P0CW01 314 aa6.93□□□□□ -1.3
TM4SF1-202ENST00000472441 KDM5BQ9UGL1 1544 aa6.93□□□□□ -1.3
TM4SF1-202ENST00000472441 DNMT1P26358 1616 aaKnown RBP6.93□□□□□ -1.3
TM4SF1-202ENST00000472441 GCC2Q8IWJ2 1684 aa6.93□□□□□ -1.3
TM4SF1-202ENST00000472441 CNGB1Q14028 1251 aaPredicted RBP6.92□□□□□ -1.3
TM4SF1-202ENST00000472441 ROCK1Q13464 1354 aa6.92□□□□□ -1.3
TM4SF1-202ENST00000472441 AKNAQ7Z591 1439 aa6.92□□□□□ -1.3
TM4SF1-202ENST00000472441 KIF13AQ9H1H9 1805 aa6.92□□□□□ -1.3
TM4SF1-202ENST00000472441 ITSN2Q9NZM3 1697 aa6.92□□□□□ -1.3
TM4SF1-202ENST00000472441 NCOA1Q15788 1441 aa6.91□□□□□ -1.3
TM4SF1-202ENST00000472441 DENND4BO75064 1496 aaPredicted RBP6.91□□□□□ -1.3
TM4SF1-202ENST00000472441 ANKRD30AQ9BXX3 1397 aa6.9□□□□□ -1.3
TM4SF1-202ENST00000472441 MAP3K4Q9Y6R4 1608 aa6.9□□□□□ -1.3
TM4SF1-202ENST00000472441 L3MBTL2Q969R5 705 aa6.9□□□□□ -1.3
TM4SF1-202ENST00000472441 ABCC10Q5T3U5 1492 aa6.9□□□□□ -1.31
TM4SF1-202ENST00000472441 CDC42BPAQ5VT25 1732 aa6.9□□□□□ -1.31
TM4SF1-202ENST00000472441 PKD2Q13563 968 aa6.89□□□□□ -1.31
TM4SF1-202ENST00000472441 GTF3C3Q9Y5Q9 886 aa6.89□□□□□ -1.31
TM4SF1-202ENST00000472441 DIP2BQ9P265 1576 aa6.88□□□□□ -1.31
TM4SF1-202ENST00000472441 C9orf84Q5VXU9 1444 aa6.88□□□□□ -1.31
TM4SF1-202ENST00000472441 ANKRD50Q9ULJ7 1429 aa6.88□□□□□ -1.31
TM4SF1-202ENST00000472441 ABCA9Q8IUA7 1624 aa6.87□□□□□ -1.31
TM4SF1-202ENST00000472441 PPRC1Q5VV67 1664 aaKnown RBP6.87□□□□□ -1.31
TM4SF1-202ENST00000472441 ZNF326Q5BKZ1 582 aaKnown RBP6.87□□□□□ -1.31
TM4SF1-202ENST00000472441 NUP155O75694 1391 aa6.87□□□□□ -1.31
TM4SF1-202ENST00000472441 ANKRD30BQ9BXX2 1392 aa6.87□□□□□ -1.31
TM4SF1-202ENST00000472441 ARAP3Q8WWN8 1544 aa6.87□□□□□ -1.31
TM4SF1-202ENST00000472441 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.87□□□□□ -1.31
TM4SF1-202ENST00000472441 CFAP74Q9C0B2 1584 aa6.87□□□□□ -1.31
TM4SF1-202ENST00000472441 ARHGAP5Q13017 1502 aa6.86□□□□□ -1.31
TM4SF1-202ENST00000472441 HSPA5P11021 654 aaKnown RBP6.86□□□□□ -1.31
TM4SF1-202ENST00000472441 KIF15Q9NS87 1388 aa6.86□□□□□ -1.31
TM4SF1-202ENST00000472441 ADGBQ8N7X0 1667 aa6.85□□□□□ -1.31
TM4SF1-202ENST00000472441 ADGRL2O95490 1459 aa6.85□□□□□ -1.31
TM4SF1-202ENST00000472441 NBPF8Q3BBV2 869 aa6.85□□□□□ -1.31
TM4SF1-202ENST00000472441 PZPP20742 1482 aa6.85□□□□□ -1.31
TM4SF1-202ENST00000472441 CDC42BPBQ9Y5S2 1711 aa6.85□□□□□ -1.31
TM4SF1-202ENST00000472441 EIF4G2P78344 907 aaKnown RBP eCLIP6.85□□□□□ -1.31
TM4SF1-202ENST00000472441 RSPH4AQ5TD94 716 aa6.85□□□□□ -1.31
TM4SF1-202ENST00000472441 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.85□□□□□ -1.31
TM4SF1-202ENST00000472441 CROCC2H7BZ55 1655 aa6.84□□□□□ -1.31
TM4SF1-202ENST00000472441 TTC37Q6PGP7 1564 aa6.84□□□□□ -1.31
TM4SF1-202ENST00000472441 MBD5Q9P267 1494 aa6.84□□□□□ -1.31
TM4SF1-202ENST00000472441 SAMD9LQ8IVG5 1584 aa6.84□□□□□ -1.31
TM4SF1-202ENST00000472441 ANP32CO43423 234 aa6.84□□□□□ -1.31
TM4SF1-202ENST00000472441 EFCAB2Q5VUJ9 269 aa6.84□□□□□ -1.31
TM4SF1-202ENST00000472441 MYT1LQ9UL68 1186 aa6.84□□□□□ -1.31
TM4SF1-202ENST00000472441 RPRD2Q5VT52 1461 aaKnown RBP6.83□□□□□ -1.32
TM4SF1-202ENST00000472441 CCDC141Q6ZP82 1450 aa6.83□□□□□ -1.32
TM4SF1-202ENST00000472441 SYCP2Q9BX26 1530 aa6.83□□□□□ -1.32
TM4SF1-202ENST00000472441 KIAA1107Q9UPP5 1409 aa6.83□□□□□ -1.32
TM4SF1-202ENST00000472441 KDM2AQ9Y2K7 1162 aa6.83□□□□□ -1.32
TM4SF1-202ENST00000472441 PREX2Q70Z35 1606 aa6.83□□□□□ -1.32
TM4SF1-202ENST00000472441 SHANK2Q9UPX8 1470 aa6.82□□□□□ -1.32
TM4SF1-202ENST00000472441 MYO5CQ9NQX4 1742 aa6.82□□□□□ -1.32
TM4SF1-202ENST00000472441 WDR7Q9Y4E6 1490 aa6.81□□□□□ -1.32
TM4SF1-202ENST00000472441 ARHGEF5Q12774 1597 aa6.81□□□□□ -1.32
TM4SF1-202ENST00000472441 NPM1P06748 294 aaKnown RBP eCLIP6.81□□□□□ -1.32
TM4SF1-202ENST00000472441 AFAP1Q8N556 730 aa6.81□□□□□ -1.32
TM4SF1-202ENST00000472441 POLR3GLQ9BT43 218 aa6.81□□□□□ -1.32
TM4SF1-202ENST00000472441 SENP3-EIF4A1A0A087X0R7 540 aa6.81□□□□□ -1.32
TM4SF1-202ENST00000472441 PLCH2O75038 1416 aa6.8□□□□□ -1.32
TM4SF1-202ENST00000472441 WASHC2AQ641Q2 1341 aa6.8□□□□□ -1.32
TM4SF1-202ENST00000472441 RGL3Q3MIN7 710 aa6.8□□□□□ -1.32
TM4SF1-202ENST00000472441 C11orf95C9JLR9 678 aaPredicted RBP6.8□□□□□ -1.32
TM4SF1-202ENST00000472441 DCAF11Q8TEB1 546 aa6.8□□□□□ -1.32
TM4SF1-202ENST00000472441 ARHGEF12Q9NZN5 1544 aa6.8□□□□□ -1.32
TM4SF1-202ENST00000472441 TEX14Q8IWB6 1497 aa6.79□□□□□ -1.32
TM4SF1-202ENST00000472441 PLEKHH2Q8IVE3 1493 aa6.79□□□□□ -1.32
TM4SF1-202ENST00000472441 SPAG9O60271 1321 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms