RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 RICTORQ6R327 1708 aa31.28■■■□□ 2.6
HDAC7-220ENST00000471235 ITSN2Q9NZM3 1697 aa31.26■■■□□ 2.6
HDAC7-220ENST00000471235 LRRC9Q6ZRR7 1453 aa31.25■■■□□ 2.59
HDAC7-220ENST00000471235 AKNAQ7Z591 1439 aa31.24■■■□□ 2.59
HDAC7-220ENST00000471235 ADGRL1O94910 1474 aa31.19■■■□□ 2.58
HDAC7-220ENST00000471235 GPATCH8Q9UKJ3 1502 aaKnown RBP31.19■■■□□ 2.58
HDAC7-220ENST00000471235 NCOA2Q15596 1464 aa31.17■■■□□ 2.58
HDAC7-220ENST00000471235 ABCC1P33527 1531 aa31.15■■■□□ 2.58
HDAC7-220ENST00000471235 SAMD9LQ8IVG5 1584 aa31.15■■■□□ 2.58
HDAC7-220ENST00000471235 DENND4BO75064 1496 aaPredicted RBP31.14■■■□□ 2.58
HDAC7-220ENST00000471235 EFCAB2Q5VUJ9 269 aa31.13■■■□□ 2.57
HDAC7-220ENST00000471235 CCNB3Q8WWL7 1395 aa31.13■■■□□ 2.57
HDAC7-220ENST00000471235 ZMYM4Q5VZL5 1548 aa31.1■■■□□ 2.57
HDAC7-220ENST00000471235 KANK4Q5T7N3 995 aaPredicted RBP31.09■■■□□ 2.57
HDAC7-220ENST00000471235 POGZQ7Z3K3 1410 aa31.08■■■□□ 2.57
HDAC7-220ENST00000471235 SCAPERQ9BY12 1400 aa31.08■■■□□ 2.57
HDAC7-220ENST00000471235 RAPGEF3O95398 923 aa31.06■■■□□ 2.56
HDAC7-220ENST00000471235 APLP2Q06481 763 aa31.05■■■□□ 2.56
HDAC7-220ENST00000471235 ARHGEF40Q8TER5 1519 aa31.03■■■□□ 2.56
HDAC7-220ENST00000471235 KDM5CP41229 1560 aa31.03■■■□□ 2.56
HDAC7-220ENST00000471235 SYCP2Q9BX26 1530 aa31.03■■■□□ 2.56
HDAC7-220ENST00000471235 ARHGEF12Q9NZN5 1544 aa31.03■■■□□ 2.56
HDAC7-220ENST00000471235 ZNF518AQ6AHZ1 1483 aa30.99■■■□□ 2.55
HDAC7-220ENST00000471235 CFDP1Q9UEE9 299 aaPredicted RBP30.97■■■□□ 2.55
HDAC7-220ENST00000471235 HECW2Q9P2P5 1572 aa30.96■■■□□ 2.55
HDAC7-220ENST00000471235 PLEKHH2Q8IVE3 1493 aa30.96■■■□□ 2.55
HDAC7-220ENST00000471235 ZFYVE16Q7Z3T8 1539 aa30.96■■■□□ 2.55
HDAC7-220ENST00000471235 ZNF777Q9ULD5 760 aaPredicted RBP30.94■■■□□ 2.54
HDAC7-220ENST00000471235 TRAPPC8Q9Y2L5 1435 aa30.93■■■□□ 2.54
HDAC7-220ENST00000471235 CAMSAP2Q08AD1 1489 aa30.93■■■□□ 2.54
HDAC7-220ENST00000471235 MYOM3Q5VTT5 1437 aa30.91■■■□□ 2.54
HDAC7-220ENST00000471235 MAGI2Q86UL8 1455 aa30.91■■■□□ 2.54
HDAC7-220ENST00000471235 KIAA1107Q9UPP5 1409 aa30.9■■■□□ 2.54
HDAC7-220ENST00000471235 KIDINS220Q9ULH0 1771 aa30.89■■■□□ 2.54
HDAC7-220ENST00000471235 YEATS2Q9ULM3 1422 aa30.88■■■□□ 2.53
HDAC7-220ENST00000471235 ABCA6Q8N139 1617 aa30.87■■■□□ 2.53
HDAC7-220ENST00000471235 SIGLEC1Q9BZZ2 1709 aa30.87■■■□□ 2.53
HDAC7-220ENST00000471235 INO80Q9ULG1 1556 aaPredicted RBP30.85■■■□□ 2.53
HDAC7-220ENST00000471235 ZNF644Q9H582 1327 aaPredicted RBP30.85■■■□□ 2.53
HDAC7-220ENST00000471235 DIP2CQ9Y2E4 1556 aa30.84■■■□□ 2.53
HDAC7-220ENST00000471235 AFAP1Q8N556 730 aa30.84■■■□□ 2.53
HDAC7-220ENST00000471235 MIA2Q96PC5 1412 aa30.83■■■□□ 2.53
HDAC7-220ENST00000471235 PTPN23Q9H3S7 1636 aa30.83■■■□□ 2.53
HDAC7-220ENST00000471235 MBD5Q9P267 1494 aa30.82■■■□□ 2.53
HDAC7-220ENST00000471235 MLH3Q9UHC1 1453 aa30.82■■■□□ 2.53
HDAC7-220ENST00000471235 ARHGEF5Q12774 1597 aa30.82■■■□□ 2.52
HDAC7-220ENST00000471235 HNRNPMP52272 730 aaKnown RBP eCLIP30.8■■■□□ 2.52
HDAC7-220ENST00000471235 ATP7AQ04656 1500 aa30.78■■■□□ 2.52
HDAC7-220ENST00000471235 CROCC2H7BZ55 1655 aa30.76■■■□□ 2.51
HDAC7-220ENST00000471235 CCDC141Q6ZP82 1450 aa30.76■■■□□ 2.51
HDAC7-220ENST00000471235 BCORL1Q5H9F3 1711 aa30.76■■■□□ 2.51
HDAC7-220ENST00000471235 FGD6Q6ZV73 1430 aa30.75■■■□□ 2.51
HDAC7-220ENST00000471235 REREQ9P2R6 1566 aa30.75■■■□□ 2.51
HDAC7-220ENST00000471235 C9orf84Q5VXU9 1444 aa30.73■■■□□ 2.51
HDAC7-220ENST00000471235 ATP10AO60312 1499 aa30.73■■■□□ 2.51
HDAC7-220ENST00000471235 TCOF1Q13428 1488 aaKnown RBP30.72■■■□□ 2.51
HDAC7-220ENST00000471235 ADGBQ8N7X0 1667 aa30.71■■■□□ 2.51
HDAC7-220ENST00000471235 SPAG9O60271 1321 aaKnown RBP30.69■■■□□ 2.5
HDAC7-220ENST00000471235 ADAMTSL3P82987 1691 aa30.68■■■□□ 2.5
HDAC7-220ENST00000471235 MAST1Q9Y2H9 1570 aa30.67■■■□□ 2.5
HDAC7-220ENST00000471235 DNMT1P26358 1616 aaKnown RBP30.67■■■□□ 2.5
HDAC7-220ENST00000471235 MYT1LQ9UL68 1186 aa30.67■■■□□ 2.5
HDAC7-220ENST00000471235 KDM4FA0A1W2PPD8 638 aa30.63■■■□□ 2.49
HDAC7-220ENST00000471235 PPARGC1BQ86YN6 1023 aaKnown RBP30.63■■■□□ 2.49
HDAC7-220ENST00000471235 PLXNC1O60486 1568 aa30.62■■■□□ 2.49
HDAC7-220ENST00000471235 RTEL1-TNFRSF6BF6WH68 1400 aa30.62■■■□□ 2.49
HDAC7-220ENST00000471235 MADDQ8WXG6 1647 aa30.61■■■□□ 2.49
HDAC7-220ENST00000471235 FER1L4A9Z1Z3 1794 aa30.6■■■□□ 2.49
HDAC7-220ENST00000471235 AGLP35573 1532 aa30.59■■■□□ 2.49
HDAC7-220ENST00000471235 RSPH4AQ5TD94 716 aa30.58■■■□□ 2.49
HDAC7-220ENST00000471235 ARID4BQ4LE39 1312 aaPredicted RBP30.57■■■□□ 2.48
HDAC7-220ENST00000471235 SHANK2Q9UPX8 1470 aa30.56■■■□□ 2.48
HDAC7-220ENST00000471235 RIMS1Q86UR5 1692 aaKnown RBP30.55■■■□□ 2.48
HDAC7-220ENST00000471235 A2MP01023 1474 aa30.54■■■□□ 2.48
HDAC7-220ENST00000471235 DAPK1P53355 1430 aa30.54■■■□□ 2.48
HDAC7-220ENST00000471235 ABCC5O15440 1437 aa30.53■■■□□ 2.48
HDAC7-220ENST00000471235 TSPY4P0CV99 314 aa30.47■■■□□ 2.47
HDAC7-220ENST00000471235 TSPY10P0CW01 314 aa30.47■■■□□ 2.47
HDAC7-220ENST00000471235 FAM50AQ14320 339 aaKnown RBP30.44■■■□□ 2.46
HDAC7-220ENST00000471235 EIF2AK4Q9P2K8 1649 aaKnown RBP30.41■■■□□ 2.46
HDAC7-220ENST00000471235 MLECQ14165 292 aa30.41■■■□□ 2.46
HDAC7-220ENST00000471235 DHX29Q7Z478 1369 aaKnown RBP30.4■■■□□ 2.46
HDAC7-220ENST00000471235 RRBP1Q9P2E9 1410 aaKnown RBP30.39■■■□□ 2.46
HDAC7-220ENST00000471235 PTPRMP28827 1452 aa30.38■■■□□ 2.45
HDAC7-220ENST00000471235 AEBP2Q6ZN18 517 aaPredicted RBP30.38■■■□□ 2.45
HDAC7-220ENST00000471235 DUOX2Q9NRD8 1548 aa30.37■■■□□ 2.45
HDAC7-220ENST00000471235 ADGRL2O95490 1459 aa30.37■■■□□ 2.45
HDAC7-220ENST00000471235 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.36■■■□□ 2.45
HDAC7-220ENST00000471235 RNF17Q9BXT8 1623 aaKnown RBP30.36■■■□□ 2.45
HDAC7-220ENST00000471235 MROH2AA6NES4 1674 aa30.34■■■□□ 2.45
HDAC7-220ENST00000471235 CLTCQ00610 1675 aaKnown RBP30.34■■■□□ 2.45
HDAC7-220ENST00000471235 C3P01024 1663 aa30.32■■■□□ 2.44
HDAC7-220ENST00000471235 PTPRKQ15262 1439 aa30.31■■■□□ 2.44
HDAC7-220ENST00000471235 KIF15Q9NS87 1388 aa30.31■■■□□ 2.44
HDAC7-220ENST00000471235 ANKRD30AQ9BXX3 1397 aa30.28■■■□□ 2.44
HDAC7-220ENST00000471235 MROH1Q8NDA8 1641 aa30.28■■■□□ 2.44
HDAC7-220ENST00000471235 CHIC2Q9UKJ5 165 aa30.27■■■□□ 2.44
HDAC7-220ENST00000471235 NCOA1Q15788 1441 aa30.27■■■□□ 2.44
HDAC7-220ENST00000471235 ERBINQ96RT1 1412 aa30.26■■■□□ 2.43
HDAC7-220ENST00000471235 DEPDC5O75140 1603 aa30.25■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms