RNA–Protein interactions for RNA: ENST00000470585.5

SF3A3-205, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-205ENST00000470585 ARHGEF12Q9NZN5 1544 aa11.55□□□□□ -0.56
SF3A3-205ENST00000470585 YEATS2Q9ULM3 1422 aa11.55□□□□□ -0.56
SF3A3-205ENST00000470585 FER1L4A9Z1Z3 1794 aa11.55□□□□□ -0.56
SF3A3-205ENST00000470585 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.55□□□□□ -0.56
SF3A3-205ENST00000470585 HNRNPUL2Q1KMD3 747 aaKnown RBP11.55□□□□□ -0.56
SF3A3-205ENST00000470585 CSRNP3Q8WYN3 585 aa11.55□□□□□ -0.56
SF3A3-205ENST00000470585 PREX1Q8TCU6 1659 aa11.55□□□□□ -0.56
SF3A3-205ENST00000470585 ARID3CA6NKF2 412 aa11.54□□□□□ -0.56
SF3A3-205ENST00000470585 P3H3Q8IVL6 736 aa11.54□□□□□ -0.56
SF3A3-205ENST00000470585 ATP10AO60312 1499 aa11.54□□□□□ -0.56
SF3A3-205ENST00000470585 PLCH2O75038 1416 aa11.53□□□□□ -0.56
SF3A3-205ENST00000470585 C9orf84Q5VXU9 1444 aa11.53□□□□□ -0.56
SF3A3-205ENST00000470585 HECW1Q76N89 1606 aa11.53□□□□□ -0.56
SF3A3-205ENST00000470585 IQSEC2Q5JU85 1478 aa11.51□□□□□ -0.57
SF3A3-205ENST00000470585 REREQ9P2R6 1566 aa11.51□□□□□ -0.57
SF3A3-205ENST00000470585 HSPA2P54652 639 aa11.51□□□□□ -0.57
SF3A3-205ENST00000470585 SCAPERQ9BY12 1400 aa11.51□□□□□ -0.57
SF3A3-205ENST00000470585 ZNF518AQ6AHZ1 1483 aa11.51□□□□□ -0.57
SF3A3-205ENST00000470585 PTPRTO14522 1441 aa11.5□□□□□ -0.57
SF3A3-205ENST00000470585 SIGLEC1Q9BZZ2 1709 aa11.49□□□□□ -0.57
SF3A3-205ENST00000470585 SOCS7O14512 581 aa11.49□□□□□ -0.57
SF3A3-205ENST00000470585 UHRF1BP1Q6BDS2 1440 aa11.49□□□□□ -0.57
SF3A3-205ENST00000470585 EFCAB2Q5VUJ9 269 aa11.48□□□□□ -0.57
SF3A3-205ENST00000470585 KDM5CP41229 1560 aa11.48□□□□□ -0.57
SF3A3-205ENST00000470585 CDK11AQ9UQ88 783 aaPredicted RBP11.47□□□□□ -0.57
SF3A3-205ENST00000470585 MYO5CQ9NQX4 1742 aa11.46□□□□□ -0.57
SF3A3-205ENST00000470585 FMN1Q68DA7 1419 aa11.46□□□□□ -0.57
SF3A3-205ENST00000470585 SCAF1Q9H7N4 1312 aaKnown RBP11.46□□□□□ -0.57
SF3A3-205ENST00000470585 STRCQ7RTU9 1775 aa11.46□□□□□ -0.58
SF3A3-205ENST00000470585 AGLP35573 1532 aa11.45□□□□□ -0.58
SF3A3-205ENST00000470585 DISP3Q9P2K9 1392 aa11.45□□□□□ -0.58
SF3A3-205ENST00000470585 MLH3Q9UHC1 1453 aa11.44□□□□□ -0.58
SF3A3-205ENST00000470585 CNTLNQ9NXG0 1405 aa11.43□□□□□ -0.58
SF3A3-205ENST00000470585 KIF14Q15058 1648 aa11.42□□□□□ -0.58
SF3A3-205ENST00000470585 CDK13Q14004 1512 aaKnown RBP11.42□□□□□ -0.58
SF3A3-205ENST00000470585 CLIP1P30622 1438 aa11.42□□□□□ -0.58
SF3A3-205ENST00000470585 TRAPPC8Q9Y2L5 1435 aa11.42□□□□□ -0.58
SF3A3-205ENST00000470585 MLECQ14165 292 aa11.41□□□□□ -0.58
SF3A3-205ENST00000470585 TROQ12816 1431 aaPredicted RBP11.41□□□□□ -0.58
SF3A3-205ENST00000470585 NPATQ14207 1427 aa11.41□□□□□ -0.58
SF3A3-205ENST00000470585 SPATA31D1Q6ZQQ2 1576 aa11.41□□□□□ -0.58
SF3A3-205ENST00000470585 DIP2CQ9Y2E4 1556 aa11.41□□□□□ -0.58
SF3A3-205ENST00000470585 CACNB1Q02641 598 aaPredicted RBP11.4□□□□□ -0.58
SF3A3-205ENST00000470585 LTBP4Q8N2S1 1624 aa11.38□□□□□ -0.59
SF3A3-205ENST00000470585 NCOA1Q15788 1441 aa11.38□□□□□ -0.59
SF3A3-205ENST00000470585 ARHGAP5Q13017 1502 aa11.38□□□□□ -0.59
SF3A3-205ENST00000470585 MROH2AA6NES4 1674 aa11.37□□□□□ -0.59
SF3A3-205ENST00000470585 C3P01024 1663 aa11.37□□□□□ -0.59
SF3A3-205ENST00000470585 ILDR2Q71H61 639 aa11.37□□□□□ -0.59
SF3A3-205ENST00000470585 ESF1Q9H501 851 aaKnown RBP11.36□□□□□ -0.59
SF3A3-205ENST00000470585 CEBPAP49715 358 aaPredicted RBP11.35□□□□□ -0.59
SF3A3-205ENST00000470585 ABCA6Q8N139 1617 aa11.35□□□□□ -0.59
SF3A3-205ENST00000470585 ABCC1P33527 1531 aa11.35□□□□□ -0.59
SF3A3-205ENST00000470585 PLA2R1Q13018 1463 aa11.34□□□□□ -0.59
SF3A3-205ENST00000470585 AFAP1Q8N556 730 aa11.34□□□□□ -0.59
SF3A3-205ENST00000470585 PREX2Q70Z35 1606 aa11.34□□□□□ -0.59
SF3A3-205ENST00000470585 CCDC18Q5T9S5 1454 aa11.33□□□□□ -0.6
SF3A3-205ENST00000470585 ARHGAP35Q9NRY4 1499 aa11.32□□□□□ -0.6
SF3A3-205ENST00000470585 CDC42BPBQ9Y5S2 1711 aa11.32□□□□□ -0.6
SF3A3-205ENST00000470585 PKD2Q13563 968 aa11.32□□□□□ -0.6
SF3A3-205ENST00000470585 ITSN2Q9NZM3 1697 aa11.31□□□□□ -0.6
SF3A3-205ENST00000470585 RANGAP1P46060 587 aaPredicted RBP11.31□□□□□ -0.6
SF3A3-205ENST00000470585 KIDINS220Q9ULH0 1771 aa11.31□□□□□ -0.6
SF3A3-205ENST00000470585 ZNF142P52746 1687 aaPredicted RBP11.3□□□□□ -0.6
SF3A3-205ENST00000470585 CAMSAP1Q5T5Y3 1602 aa11.29□□□□□ -0.6
SF3A3-205ENST00000470585 MYT1LQ9UL68 1186 aa11.29□□□□□ -0.6
SF3A3-205ENST00000470585 TCOF1Q13428 1488 aaKnown RBP11.28□□□□□ -0.6
SF3A3-205ENST00000470585 PLEKHH2Q8IVE3 1493 aa11.28□□□□□ -0.6
SF3A3-205ENST00000470585 CASKIN1Q8WXD9 1431 aa11.27□□□□□ -0.6
SF3A3-205ENST00000470585 KIAA1107Q9UPP5 1409 aa11.27□□□□□ -0.6
SF3A3-205ENST00000470585 ZMYM3Q14202 1370 aa11.27□□□□□ -0.61
SF3A3-205ENST00000470585 FAM135AQ9P2D6 1515 aa11.26□□□□□ -0.61
SF3A3-205ENST00000470585 PLXNC1O60486 1568 aa11.26□□□□□ -0.61
SF3A3-205ENST00000470585 SAMD9LQ8IVG5 1584 aa11.26□□□□□ -0.61
SF3A3-205ENST00000470585 ATP1B4Q9UN42 357 aaPredicted RBP11.25□□□□□ -0.61
SF3A3-205ENST00000470585 CDC42BPAQ5VT25 1732 aa11.24□□□□□ -0.61
SF3A3-205ENST00000470585 LRRIQ1Q96JM4 1722 aa11.24□□□□□ -0.61
SF3A3-205ENST00000470585 UBTFP17480 764 aaKnown RBP11.24□□□□□ -0.61
SF3A3-205ENST00000470585 FYCO1Q9BQS8 1478 aa11.24□□□□□ -0.61
SF3A3-205ENST00000470585 CEP170BQ9Y4F5 1589 aaPredicted RBP11.24□□□□□ -0.61
SF3A3-205ENST00000470585 MYO3AQ8NEV4 1616 aa11.24□□□□□ -0.61
SF3A3-205ENST00000470585 DCAF8L1A6NGE4 600 aa11.23□□□□□ -0.61
SF3A3-205ENST00000470585 SPAG9O60271 1321 aaKnown RBP11.23□□□□□ -0.61
SF3A3-205ENST00000470585 PTPRKQ15262 1439 aa11.23□□□□□ -0.61
SF3A3-205ENST00000470585 UBAP1LF5GYI3 381 aa11.22□□□□□ -0.61
SF3A3-205ENST00000470585 CPS1P31327 1500 aa11.22□□□□□ -0.61
SF3A3-205ENST00000470585 ATP7AQ04656 1500 aa11.22□□□□□ -0.61
SF3A3-205ENST00000470585 INO80Q9ULG1 1556 aaPredicted RBP11.22□□□□□ -0.61
SF3A3-205ENST00000470585 A2ML1A8K2U0 1454 aa11.21□□□□□ -0.61
SF3A3-205ENST00000470585 A2MP01023 1474 aa11.21□□□□□ -0.61
SF3A3-205ENST00000470585 SYCP2Q9BX26 1530 aa11.2□□□□□ -0.62
SF3A3-205ENST00000470585 ZNF335Q9H4Z2 1342 aaPredicted RBP11.2□□□□□ -0.62
SF3A3-205ENST00000470585 SUPT6HQ7KZ85 1726 aaKnown RBP11.2□□□□□ -0.62
SF3A3-205ENST00000470585 ADGBQ8N7X0 1667 aa11.2□□□□□ -0.62
SF3A3-205ENST00000470585 GPATCH8Q9UKJ3 1502 aaKnown RBP11.19□□□□□ -0.62
SF3A3-205ENST00000470585 RTEL1-TNFRSF6BF6WH68 1400 aa11.18□□□□□ -0.62
SF3A3-205ENST00000470585 CLTCQ00610 1675 aaKnown RBP11.18□□□□□ -0.62
SF3A3-205ENST00000470585 NCKAP5LQ9HCH0 1330 aa11.18□□□□□ -0.62
SF3A3-205ENST00000470585 TOM1O60784 492 aa11.18□□□□□ -0.62
SF3A3-205ENST00000470585 DNMT1P26358 1616 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms