RNA–Protein interactions for RNA: ENST00000470056.5

GAPVD1-215, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 8,923 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-215ENST00000470056 DAPK1P53355 1430 aa9.86□□□□□ -0.83
GAPVD1-215ENST00000470056 ABCA8O94911 1581 aa9.86□□□□□ -0.83
GAPVD1-215ENST00000470056 PLEKHH2Q8IVE3 1493 aa9.83□□□□□ -0.84
GAPVD1-215ENST00000470056 CAMSAP2Q08AD1 1489 aa9.83□□□□□ -0.84
GAPVD1-215ENST00000470056 ATP10BO94823 1461 aa9.83□□□□□ -0.84
GAPVD1-215ENST00000470056 NPM1P06748 294 aaKnown RBP eCLIP9.83□□□□□ -0.84
GAPVD1-215ENST00000470056 GPATCH8Q9UKJ3 1502 aaKnown RBP9.82□□□□□ -0.84
GAPVD1-215ENST00000470056 ABCC5O15440 1437 aa9.81□□□□□ -0.84
GAPVD1-215ENST00000470056 MAPKBP1O60336 1514 aa9.81□□□□□ -0.84
GAPVD1-215ENST00000470056 PTPRKQ15262 1439 aa9.81□□□□□ -0.84
GAPVD1-215ENST00000470056 ADCY10Q96PN6 1610 aa9.81□□□□□ -0.84
GAPVD1-215ENST00000470056 ABCC2Q92887 1545 aa9.81□□□□□ -0.84
GAPVD1-215ENST00000470056 SLC4A1APQ9BWU0 796 aaKnown RBP9.81□□□□□ -0.84
GAPVD1-215ENST00000470056 MYT1LQ9UL68 1186 aa9.81□□□□□ -0.84
GAPVD1-215ENST00000470056 CHD1O14646 1710 aa9.8□□□□□ -0.84
GAPVD1-215ENST00000470056 DNMT1P26358 1616 aaKnown RBP9.8□□□□□ -0.84
GAPVD1-215ENST00000470056 SHANK2Q9UPX8 1470 aa9.8□□□□□ -0.84
GAPVD1-215ENST00000470056 LRRIQ1Q96JM4 1722 aa9.8□□□□□ -0.84
GAPVD1-215ENST00000470056 SIN3AQ96ST3 1273 aa9.8□□□□□ -0.84
GAPVD1-215ENST00000470056 MPHOSPH9Q99550 1183 aa9.8□□□□□ -0.84
GAPVD1-215ENST00000470056 OSCARQ8IYS5 282 aa9.79□□□□□ -0.84
GAPVD1-215ENST00000470056 EFCAB2Q5VUJ9 269 aa9.79□□□□□ -0.84
GAPVD1-215ENST00000470056 SHROOM2Q13796 1616 aa9.79□□□□□ -0.84
GAPVD1-215ENST00000470056 UHRF1BP1LA0JNW5 1464 aa9.79□□□□□ -0.84
GAPVD1-215ENST00000470056 PPP1R15AO75807 674 aaPredicted RBP9.78□□□□□ -0.84
GAPVD1-215ENST00000470056 GCC2Q8IWJ2 1684 aa9.78□□□□□ -0.84
GAPVD1-215ENST00000470056 ZNF644Q9H582 1327 aaPredicted RBP9.77□□□□□ -0.85
GAPVD1-215ENST00000470056 ADGRL2O95490 1459 aa9.77□□□□□ -0.85
GAPVD1-215ENST00000470056 KCNH8Q96L42 1107 aa9.77□□□□□ -0.85
GAPVD1-215ENST00000470056 C9orf84Q5VXU9 1444 aa9.77□□□□□ -0.85
GAPVD1-215ENST00000470056 ABCC10Q5T3U5 1492 aa9.76□□□□□ -0.85
GAPVD1-215ENST00000470056 ANKRD50Q9ULJ7 1429 aa9.76□□□□□ -0.85
GAPVD1-215ENST00000470056 CCDC141Q6ZP82 1450 aa9.76□□□□□ -0.85
GAPVD1-215ENST00000470056 DAXXQ9UER7 740 aaPredicted RBP9.76□□□□□ -0.85
GAPVD1-215ENST00000470056 CLASP1Q7Z460 1538 aa9.76□□□□□ -0.85
GAPVD1-215ENST00000470056 RTL5Q5HYW3 569 aaPredicted RBP9.75□□□□□ -0.85
GAPVD1-215ENST00000470056 NCOA1Q15788 1441 aa9.75□□□□□ -0.85
GAPVD1-215ENST00000470056 ARHGAP5Q13017 1502 aa9.75□□□□□ -0.85
GAPVD1-215ENST00000470056 KIAA1107Q9UPP5 1409 aa9.73□□□□□ -0.85
GAPVD1-215ENST00000470056 KIF15Q9NS87 1388 aa9.73□□□□□ -0.85
GAPVD1-215ENST00000470056 ARHGEF5Q12774 1597 aa9.72□□□□□ -0.85
GAPVD1-215ENST00000470056 NUP155O75694 1391 aa9.72□□□□□ -0.85
GAPVD1-215ENST00000470056 HNRNPMP52272 730 aaKnown RBP eCLIP9.72□□□□□ -0.856e-13■■■■■ 43.1
GAPVD1-215ENST00000470056 KDM5BQ9UGL1 1544 aa9.72□□□□□ -0.85
GAPVD1-215ENST00000470056 EIF4G2P78344 907 aaKnown RBP eCLIP9.7□□□□□ -0.86
GAPVD1-215ENST00000470056 ADGBQ8N7X0 1667 aa9.7□□□□□ -0.86
GAPVD1-215ENST00000470056 PLCH2O75038 1416 aa9.7□□□□□ -0.86
GAPVD1-215ENST00000470056 PKD2Q13563 968 aa9.69□□□□□ -0.86
GAPVD1-215ENST00000470056 ANP32CO43423 234 aa9.69□□□□□ -0.86
GAPVD1-215ENST00000470056 MIER1Q8N108 512 aa9.68□□□□□ -0.86
GAPVD1-215ENST00000470056 ANKRD30BQ9BXX2 1392 aa9.68□□□□□ -0.86
GAPVD1-215ENST00000470056 PREX2Q70Z35 1606 aa9.68□□□□□ -0.86
GAPVD1-215ENST00000470056 WDR7Q9Y4E6 1490 aa9.67□□□□□ -0.86
GAPVD1-215ENST00000470056 SPAG9O60271 1321 aaKnown RBP9.67□□□□□ -0.86
GAPVD1-215ENST00000470056 ARAP3Q8WWN8 1544 aa9.67□□□□□ -0.86
GAPVD1-215ENST00000470056 KANK1Q14678 1352 aa9.66□□□□□ -0.86
GAPVD1-215ENST00000470056 RPRD2Q5VT52 1461 aaKnown RBP9.66□□□□□ -0.86
GAPVD1-215ENST00000470056 L3MBTL2Q969R5 705 aa9.66□□□□□ -0.86
GAPVD1-215ENST00000470056 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.65□□□□□ -0.86
GAPVD1-215ENST00000470056 MBD5Q9P267 1494 aa9.65□□□□□ -0.86
GAPVD1-215ENST00000470056 CROCC2H7BZ55 1655 aa9.64□□□□□ -0.87
GAPVD1-215ENST00000470056 SYCP2Q9BX26 1530 aa9.64□□□□□ -0.87
GAPVD1-215ENST00000470056 ERBINQ96RT1 1412 aa9.64□□□□□ -0.87
GAPVD1-215ENST00000470056 CDC42BPAQ5VT25 1732 aa9.64□□□□□ -0.87
GAPVD1-215ENST00000470056 ERCC6L2Q5T890 1561 aa9.64□□□□□ -0.87
GAPVD1-215ENST00000470056 ZCCHC11Q5TAX3 1644 aaKnown RBP9.63□□□□□ -0.87
GAPVD1-215ENST00000470056 DUOX2Q9NRD8 1548 aa9.63□□□□□ -0.87
GAPVD1-215ENST00000470056 RTEL1-TNFRSF6BF6WH68 1400 aa9.63□□□□□ -0.87
GAPVD1-215ENST00000470056 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.63□□□□□ -0.874e-9■□□□□ 10.4
GAPVD1-215ENST00000470056 MAST1Q9Y2H9 1570 aa9.63□□□□□ -0.87
GAPVD1-215ENST00000470056 DDX10Q13206 875 aaKnown RBP9.63□□□□□ -0.87
GAPVD1-215ENST00000470056 MYO5CQ9NQX4 1742 aa9.62□□□□□ -0.87
GAPVD1-215ENST00000470056 FOXD1Q16676 465 aa9.62□□□□□ -0.87
GAPVD1-215ENST00000470056 SAMD9LQ8IVG5 1584 aa9.62□□□□□ -0.87
GAPVD1-215ENST00000470056 CCDC144AA2RUR9 1427 aa9.62□□□□□ -0.87
GAPVD1-215ENST00000470056 ZNF326Q5BKZ1 582 aaKnown RBP9.62□□□□□ -0.87
GAPVD1-215ENST00000470056 TTC37Q6PGP7 1564 aa9.62□□□□□ -0.87
GAPVD1-215ENST00000470056 PZPP20742 1482 aa9.62□□□□□ -0.87
GAPVD1-215ENST00000470056 KDM5DQ9BY66 1539 aa9.62□□□□□ -0.87
GAPVD1-215ENST00000470056 ASXL2Q76L83 1435 aa9.6□□□□□ -0.87
GAPVD1-215ENST00000470056 CCER2I3L3R5 266 aa9.6□□□□□ -0.87
GAPVD1-215ENST00000470056 HSPA5P11021 654 aaKnown RBP9.6□□□□□ -0.87
GAPVD1-215ENST00000470056 FANCAO15360 1455 aa9.6□□□□□ -0.87
GAPVD1-215ENST00000470056 STAC3Q96MF2 364 aa9.59□□□□□ -0.87
GAPVD1-215ENST00000470056 PLXNC1O60486 1568 aa9.59□□□□□ -0.87
GAPVD1-215ENST00000470056 ADGRL1O94910 1474 aa9.59□□□□□ -0.87
GAPVD1-215ENST00000470056 KDM6BO15054 1643 aa9.58□□□□□ -0.88
GAPVD1-215ENST00000470056 ABCC1P33527 1531 aa9.58□□□□□ -0.88
GAPVD1-215ENST00000470056 ARID4BQ4LE39 1312 aaPredicted RBP9.58□□□□□ -0.88
GAPVD1-215ENST00000470056 ARHGEF12Q9NZN5 1544 aa9.58□□□□□ -0.88
GAPVD1-215ENST00000470056 SCAPERQ9BY12 1400 aa9.57□□□□□ -0.88
GAPVD1-215ENST00000470056 FAM135AQ9P2D6 1515 aa9.57□□□□□ -0.88
GAPVD1-215ENST00000470056 GTF3C3Q9Y5Q9 886 aa9.56□□□□□ -0.88
GAPVD1-215ENST00000470056 TEX14Q8IWB6 1497 aa9.56□□□□□ -0.88
GAPVD1-215ENST00000470056 CARD11Q9BXL7 1154 aa9.56□□□□□ -0.88
GAPVD1-215ENST00000470056 ROCK2O75116 1388 aaKnown RBP9.55□□□□□ -0.88
GAPVD1-215ENST00000470056 CD109Q6YHK3 1445 aa9.55□□□□□ -0.88
GAPVD1-215ENST00000470056 CFAP74Q9C0B2 1584 aa9.55□□□□□ -0.88
GAPVD1-215ENST00000470056 CDC42BPBQ9Y5S2 1711 aa9.55□□□□□ -0.88
GAPVD1-215ENST00000470056 DCAF11Q8TEB1 546 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms