RNA–Protein interactions for RNA: ENST00000469541.5

ITM2A-205, Transcript of integral membrane protein 2A, humanhuman

TSL 2

Gene ITM2A, Length 879 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2A-205ENST00000469541 SUPT6HQ7KZ85 1726 aaKnown RBP13.13□□□□□ -0.31
ITM2A-205ENST00000469541 MTUS2Q5JR59 1369 aa13.13□□□□□ -0.31
ITM2A-205ENST00000469541 ERCC6L2Q5T890 1561 aa13.12□□□□□ -0.31
ITM2A-205ENST00000469541 REM2Q8IYK8 340 aaPredicted RBP13.12□□□□□ -0.31
ITM2A-205ENST00000469541 SP7Q8TDD2 431 aaPredicted RBP13.1□□□□□ -0.31
ITM2A-205ENST00000469541 ZBTB12Q9Y330 459 aaPredicted RBP13.1□□□□□ -0.31
ITM2A-205ENST00000469541 FGD6Q6ZV73 1430 aa13.1□□□□□ -0.31
ITM2A-205ENST00000469541 PTPRGP23470 1445 aa13.09□□□□□ -0.31
ITM2A-205ENST00000469541 MYOM3Q5VTT5 1437 aa13.09□□□□□ -0.31
ITM2A-205ENST00000469541 ATP10BO94823 1461 aa13.08□□□□□ -0.32
ITM2A-205ENST00000469541 TCOF1Q13428 1488 aaKnown RBP13.07□□□□□ -0.32
ITM2A-205ENST00000469541 ADCY10Q96PN6 1610 aa13.06□□□□□ -0.32
ITM2A-205ENST00000469541 TROQ12816 1431 aaPredicted RBP13.06□□□□□ -0.32
ITM2A-205ENST00000469541 ZEB1P37275 1124 aaPredicted RBP13.06□□□□□ -0.32
ITM2A-205ENST00000469541 PIP4P2Q8N4L2 257 aa13.05□□□□□ -0.32
ITM2A-205ENST00000469541 OSCARQ8IYS5 282 aa13.04□□□□□ -0.32
ITM2A-205ENST00000469541 MIA2Q96PC5 1412 aa13.04□□□□□ -0.32
ITM2A-205ENST00000469541 UACAQ9BZF9 1416 aa13.04□□□□□ -0.32
ITM2A-205ENST00000469541 PTPN23Q9H3S7 1636 aa13.02□□□□□ -0.32
ITM2A-205ENST00000469541 UHRF1BP1LA0JNW5 1464 aa13.02□□□□□ -0.33
ITM2A-205ENST00000469541 CDK11AQ9UQ88 783 aaPredicted RBP13.01□□□□□ -0.33
ITM2A-205ENST00000469541 ABCC2Q92887 1545 aa13.01□□□□□ -0.33
ITM2A-205ENST00000469541 PTPRKQ15262 1439 aa13□□□□□ -0.33
ITM2A-205ENST00000469541 ARID3CA6NKF2 412 aa13□□□□□ -0.33
ITM2A-205ENST00000469541 ABCC10Q5T3U5 1492 aa12.99□□□□□ -0.33
ITM2A-205ENST00000469541 KIF14Q15058 1648 aa12.99□□□□□ -0.33
ITM2A-205ENST00000469541 FAM50AQ14320 339 aaKnown RBP12.97□□□□□ -0.33
ITM2A-205ENST00000469541 CCER1Q8TC90 406 aaPredicted RBP12.97□□□□□ -0.33
ITM2A-205ENST00000469541 GPATCH8Q9UKJ3 1502 aaKnown RBP12.97□□□□□ -0.33
ITM2A-205ENST00000469541 DHX57Q6P158 1386 aaKnown RBP12.96□□□□□ -0.33
ITM2A-205ENST00000469541 KDM5BQ9UGL1 1544 aa12.96□□□□□ -0.33
ITM2A-205ENST00000469541 SETD5Q9C0A6 1442 aa12.96□□□□□ -0.34
ITM2A-205ENST00000469541 PITPNM1O00562 1244 aa12.95□□□□□ -0.34
ITM2A-205ENST00000469541 FXR2P51116 673 aaKnown RBP eCLIP12.95□□□□□ -0.34
ITM2A-205ENST00000469541 PLEKHD1A6NEE1 506 aa12.94□□□□□ -0.34
ITM2A-205ENST00000469541 RAB3GAP2Q9H2M9 1393 aa12.94□□□□□ -0.34
ITM2A-205ENST00000469541 ITSN2Q9NZM3 1697 aa12.93□□□□□ -0.34
ITM2A-205ENST00000469541 ZBTB22O15209 634 aa12.93□□□□□ -0.34
ITM2A-205ENST00000469541 CDC42BPAQ5VT25 1732 aa12.93□□□□□ -0.34
ITM2A-205ENST00000469541 HFM1A2PYH4 1435 aa12.92□□□□□ -0.34
ITM2A-205ENST00000469541 ITGAEP38570 1179 aa12.92□□□□□ -0.34
ITM2A-205ENST00000469541 AKNAQ7Z591 1439 aa12.92□□□□□ -0.34
ITM2A-205ENST00000469541 DNMT1P26358 1616 aaKnown RBP12.91□□□□□ -0.34
ITM2A-205ENST00000469541 ZCCHC11Q5TAX3 1644 aaKnown RBP12.91□□□□□ -0.34
ITM2A-205ENST00000469541 CLSPNQ9HAW4 1339 aa12.91□□□□□ -0.34
ITM2A-205ENST00000469541 HAX1O00165 279 aa12.9□□□□□ -0.34
ITM2A-205ENST00000469541 ABCC5O15440 1437 aa12.89□□□□□ -0.35
ITM2A-205ENST00000469541 NAIPQ13075 1403 aa12.89□□□□□ -0.35
ITM2A-205ENST00000469541 DAPK1P53355 1430 aa12.88□□□□□ -0.35
ITM2A-205ENST00000469541 ZNF644Q9H582 1327 aaPredicted RBP12.88□□□□□ -0.35
ITM2A-205ENST00000469541 CAMSAP2Q08AD1 1489 aa12.87□□□□□ -0.35
ITM2A-205ENST00000469541 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.87□□□□□ -0.35
ITM2A-205ENST00000469541 GCC2Q8IWJ2 1684 aa12.86□□□□□ -0.35
ITM2A-205ENST00000469541 ROCK1Q13464 1354 aa12.86□□□□□ -0.35
ITM2A-205ENST00000469541 CDC42BPBQ9Y5S2 1711 aa12.86□□□□□ -0.35
ITM2A-205ENST00000469541 PREX2Q70Z35 1606 aa12.86□□□□□ -0.35
ITM2A-205ENST00000469541 MAPKBP1O60336 1514 aa12.85□□□□□ -0.35
ITM2A-205ENST00000469541 TTC37Q6PGP7 1564 aa12.85□□□□□ -0.35
ITM2A-205ENST00000469541 CFDP1Q9UEE9 299 aaPredicted RBP12.84□□□□□ -0.35
ITM2A-205ENST00000469541 CROCC2H7BZ55 1655 aa12.83□□□□□ -0.35
ITM2A-205ENST00000469541 ADGRL2O95490 1459 aa12.83□□□□□ -0.36
ITM2A-205ENST00000469541 EVX2Q03828 476 aa12.82□□□□□ -0.36
ITM2A-205ENST00000469541 MBD5Q9P267 1494 aa12.82□□□□□ -0.36
ITM2A-205ENST00000469541 ARHGEF5Q12774 1597 aa12.81□□□□□ -0.36
ITM2A-205ENST00000469541 SAMD9LQ8IVG5 1584 aa12.81□□□□□ -0.36
ITM2A-205ENST00000469541 KDM6BO15054 1643 aa12.8□□□□□ -0.36
ITM2A-205ENST00000469541 MYO5CQ9NQX4 1742 aa12.79□□□□□ -0.36
ITM2A-205ENST00000469541 SHANK2Q9UPX8 1470 aa12.79□□□□□ -0.36
ITM2A-205ENST00000469541 ATXN8OSP0DMR3 200 aa12.79□□□□□ -0.36
ITM2A-205ENST00000469541 ADGBQ8N7X0 1667 aa12.79□□□□□ -0.36
ITM2A-205ENST00000469541 PLCH2O75038 1416 aa12.79□□□□□ -0.36
ITM2A-205ENST00000469541 NCOA1Q15788 1441 aa12.79□□□□□ -0.36
ITM2A-205ENST00000469541 ARAP3Q8WWN8 1544 aa12.78□□□□□ -0.36
ITM2A-205ENST00000469541 WDR7Q9Y4E6 1490 aa12.78□□□□□ -0.36
ITM2A-205ENST00000469541 RRP7BPQ9NSQ0 103 aa12.77□□□□□ -0.37
ITM2A-205ENST00000469541 CHIC2Q9UKJ5 165 aa12.77□□□□□ -0.37
ITM2A-205ENST00000469541 KIAA1107Q9UPP5 1409 aa12.77□□□□□ -0.37
ITM2A-205ENST00000469541 DENND4BO75064 1496 aaPredicted RBP12.77□□□□□ -0.37
ITM2A-205ENST00000469541 ABCA9Q8IUA7 1624 aa12.76□□□□□ -0.37
ITM2A-205ENST00000469541 MAST1Q9Y2H9 1570 aa12.75□□□□□ -0.37
ITM2A-205ENST00000469541 ASXL2Q76L83 1435 aa12.74□□□□□ -0.37
ITM2A-205ENST00000469541 ARHGEF12Q9NZN5 1544 aa12.73□□□□□ -0.37
ITM2A-205ENST00000469541 PLEKHH2Q8IVE3 1493 aa12.73□□□□□ -0.37
ITM2A-205ENST00000469541 RSPH4AQ5TD94 716 aa12.73□□□□□ -0.37
ITM2A-205ENST00000469541 ZNF777Q9ULD5 760 aaPredicted RBP12.73□□□□□ -0.37
ITM2A-205ENST00000469541 ARHGAP5Q13017 1502 aa12.72□□□□□ -0.37
ITM2A-205ENST00000469541 CCDC141Q6ZP82 1450 aa12.72□□□□□ -0.37
ITM2A-205ENST00000469541 ACIN1Q9UKV3 1341 aaKnown RBP12.72□□□□□ -0.37
ITM2A-205ENST00000469541 SPDYE2BA6NHP3 402 aa12.72□□□□□ -0.37
ITM2A-205ENST00000469541 SPDYE6P0CI01 402 aa12.72□□□□□ -0.37
ITM2A-205ENST00000469541 SPDYE2Q495Y8 402 aa12.72□□□□□ -0.37
ITM2A-205ENST00000469541 KCNH8Q96L42 1107 aa12.72□□□□□ -0.37
ITM2A-205ENST00000469541 C9orf84Q5VXU9 1444 aa12.71□□□□□ -0.37
ITM2A-205ENST00000469541 RIMBP3CA6NJZ7 1639 aa12.71□□□□□ -0.37
ITM2A-205ENST00000469541 RIMBP3BA6NNM3 1639 aa12.71□□□□□ -0.37
ITM2A-205ENST00000469541 RIMBP3Q9UFD9 1639 aa12.71□□□□□ -0.37
ITM2A-205ENST00000469541 HNRNPMP52272 730 aaKnown RBP eCLIP12.71□□□□□ -0.37
ITM2A-205ENST00000469541 ABCC1P33527 1531 aa12.71□□□□□ -0.38
ITM2A-205ENST00000469541 SYCP2Q9BX26 1530 aa12.71□□□□□ -0.38
ITM2A-205ENST00000469541 ANKRD30AQ9BXX3 1397 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms