RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 EFCAB2Q5VUJ9 269 aa20.22■□□□□ 0.83
HDAC3-204ENST00000469207 CDK11AQ9UQ88 783 aaPredicted RBP20.22■□□□□ 0.83
HDAC3-204ENST00000469207 ZFYVE16Q7Z3T8 1539 aa20.22■□□□□ 0.83
HDAC3-204ENST00000469207 LMTK3Q96Q04 1460 aa20.21■□□□□ 0.83
HDAC3-204ENST00000469207 ZMYM4Q5VZL5 1548 aa20.21■□□□□ 0.83
HDAC3-204ENST00000469207 AFAP1Q8N556 730 aa20.2■□□□□ 0.82
HDAC3-204ENST00000469207 KIF14Q15058 1648 aa20.2■□□□□ 0.82
HDAC3-204ENST00000469207 POGZQ7Z3K3 1410 aa20.19■□□□□ 0.82
HDAC3-204ENST00000469207 PCF11O94913 1555 aaKnown RBP20.19■□□□□ 0.82
HDAC3-204ENST00000469207 MAGI2Q86UL8 1455 aa20.17■□□□□ 0.82
HDAC3-204ENST00000469207 CEBPAP49715 358 aaPredicted RBP20.16■□□□□ 0.82
HDAC3-204ENST00000469207 FBXO41Q8TF61 875 aa20.16■□□□□ 0.82
HDAC3-204ENST00000469207 LRRIQ1Q96JM4 1722 aa20.16■□□□□ 0.82
HDAC3-204ENST00000469207 TROQ12816 1431 aaPredicted RBP20.15■□□□□ 0.82
HDAC3-204ENST00000469207 ATP10AO60312 1499 aa20.14■□□□□ 0.81
HDAC3-204ENST00000469207 MYT1LQ9UL68 1186 aa20.14■□□□□ 0.81
HDAC3-204ENST00000469207 MYO5CQ9NQX4 1742 aa20.13■□□□□ 0.81
HDAC3-204ENST00000469207 ARHGAP5Q13017 1502 aa20.11■□□□□ 0.81
HDAC3-204ENST00000469207 C9orf84Q5VXU9 1444 aa20.09■□□□□ 0.81
HDAC3-204ENST00000469207 CLIP1P30622 1438 aa20.08■□□□□ 0.8
HDAC3-204ENST00000469207 FER1L4A9Z1Z3 1794 aa20.07■□□□□ 0.8
HDAC3-204ENST00000469207 ZNF518AQ6AHZ1 1483 aa20.05■□□□□ 0.8
HDAC3-204ENST00000469207 CDC42BPBQ9Y5S2 1711 aa20.05■□□□□ 0.8
HDAC3-204ENST00000469207 CASKIN1Q8WXD9 1431 aa20.05■□□□□ 0.8
HDAC3-204ENST00000469207 ARHGEF12Q9NZN5 1544 aa20.05■□□□□ 0.8
HDAC3-204ENST00000469207 TRAPPC8Q9Y2L5 1435 aa20.04■□□□□ 0.8
HDAC3-204ENST00000469207 ZNF777Q9ULD5 760 aaPredicted RBP20.02■□□□□ 0.8
HDAC3-204ENST00000469207 KDM5CP41229 1560 aa20.01■□□□□ 0.79
HDAC3-204ENST00000469207 DIP2CQ9Y2E4 1556 aa19.99■□□□□ 0.79
HDAC3-204ENST00000469207 CCDC18Q5T9S5 1454 aa19.98■□□□□ 0.79
HDAC3-204ENST00000469207 HNRNPMP52272 730 aaKnown RBP eCLIP19.97■□□□□ 0.79
HDAC3-204ENST00000469207 MLH3Q9UHC1 1453 aa19.97■□□□□ 0.79
HDAC3-204ENST00000469207 ABCA6Q8N139 1617 aa19.96■□□□□ 0.79
HDAC3-204ENST00000469207 CERKQ8TCT0 537 aa19.96■□□□□ 0.79
HDAC3-204ENST00000469207 PREX2Q70Z35 1606 aa19.95■□□□□ 0.78
HDAC3-204ENST00000469207 ABCC1P33527 1531 aa19.95■□□□□ 0.78
HDAC3-204ENST00000469207 CDC42BPAQ5VT25 1732 aa19.93■□□□□ 0.78
HDAC3-204ENST00000469207 ITSN2Q9NZM3 1697 aa19.91■□□□□ 0.78
HDAC3-204ENST00000469207 ESF1Q9H501 851 aaKnown RBP19.91■□□□□ 0.78
HDAC3-204ENST00000469207 FYCO1Q9BQS8 1478 aa19.91■□□□□ 0.78
HDAC3-204ENST00000469207 GPATCH8Q9UKJ3 1502 aaKnown RBP19.91■□□□□ 0.78
HDAC3-204ENST00000469207 PREX1Q8TCU6 1659 aa19.91■□□□□ 0.78
HDAC3-204ENST00000469207 KIDINS220Q9ULH0 1771 aa19.9■□□□□ 0.78
HDAC3-204ENST00000469207 REREQ9P2R6 1566 aa19.88■□□□□ 0.77
HDAC3-204ENST00000469207 SAMD9LQ8IVG5 1584 aa19.87■□□□□ 0.77
HDAC3-204ENST00000469207 UHRF1BP1Q6BDS2 1440 aa19.87■□□□□ 0.77
HDAC3-204ENST00000469207 CFDP1Q9UEE9 299 aaPredicted RBP19.87■□□□□ 0.77
HDAC3-204ENST00000469207 AGLP35573 1532 aa19.86■□□□□ 0.77
HDAC3-204ENST00000469207 STRCQ7RTU9 1775 aa19.86■□□□□ 0.77
HDAC3-204ENST00000469207 SPAG9O60271 1321 aaKnown RBP19.86■□□□□ 0.77
HDAC3-204ENST00000469207 C3P01024 1663 aa19.86■□□□□ 0.77
HDAC3-204ENST00000469207 SYCP2Q9BX26 1530 aa19.85■□□□□ 0.77
HDAC3-204ENST00000469207 SETD1BQ9UPS6 1966 aaKnown RBP19.84■□□□□ 0.77
HDAC3-204ENST00000469207 ZNF644Q9H582 1327 aaPredicted RBP19.84■□□□□ 0.77
HDAC3-204ENST00000469207 CCNB3Q8WWL7 1395 aa19.83■□□□□ 0.76
HDAC3-204ENST00000469207 DMRT2Q9Y5R5 561 aa19.82■□□□□ 0.76
HDAC3-204ENST00000469207 MTUS2Q5JR59 1369 aa19.8■□□□□ 0.76
HDAC3-204ENST00000469207 ZMYM3Q14202 1370 aa19.79■□□□□ 0.76
HDAC3-204ENST00000469207 SUPT6HQ7KZ85 1726 aaKnown RBP19.79■□□□□ 0.76
HDAC3-204ENST00000469207 GGT6Q6P531 493 aa19.78■□□□□ 0.76
HDAC3-204ENST00000469207 KIAA1107Q9UPP5 1409 aa19.77■□□□□ 0.76
HDAC3-204ENST00000469207 CNTLNQ9NXG0 1405 aa19.76■□□□□ 0.75
HDAC3-204ENST00000469207 ATP7AQ04656 1500 aa19.75■□□□□ 0.75
HDAC3-204ENST00000469207 A2MP01023 1474 aa19.73■□□□□ 0.75
HDAC3-204ENST00000469207 NCKAP5LQ9HCH0 1330 aa19.73■□□□□ 0.75
HDAC3-204ENST00000469207 PTPRTO14522 1441 aa19.72■□□□□ 0.75
HDAC3-204ENST00000469207 PLEKHH2Q8IVE3 1493 aa19.72■□□□□ 0.75
HDAC3-204ENST00000469207 INO80Q9ULG1 1556 aaPredicted RBP19.7■□□□□ 0.74
HDAC3-204ENST00000469207 MBD5Q9P267 1494 aa19.7■□□□□ 0.74
HDAC3-204ENST00000469207 TIAM1Q13009 1591 aa19.7■□□□□ 0.74
HDAC3-204ENST00000469207 NCOA1Q15788 1441 aa19.69■□□□□ 0.74
HDAC3-204ENST00000469207 CEP162Q5TB80 1403 aa19.69■□□□□ 0.74
HDAC3-204ENST00000469207 CLTCQ00610 1675 aaKnown RBP19.69■□□□□ 0.74
HDAC3-204ENST00000469207 LOC105371045A0A1W2PR82 267 aa19.68■□□□□ 0.74
HDAC3-204ENST00000469207 PLXNC1O60486 1568 aa19.68■□□□□ 0.74
HDAC3-204ENST00000469207 NPATQ14207 1427 aa19.68■□□□□ 0.74
HDAC3-204ENST00000469207 CAMSAP1Q5T5Y3 1602 aa19.67■□□□□ 0.74
HDAC3-204ENST00000469207 PTPRKQ15262 1439 aa19.66■□□□□ 0.74
HDAC3-204ENST00000469207 MROH2AA6NES4 1674 aa19.65■□□□□ 0.74
HDAC3-204ENST00000469207 EHBP1L1Q8N3D4 1523 aa19.65■□□□□ 0.74
HDAC3-204ENST00000469207 LTBP4Q8N2S1 1624 aa19.65■□□□□ 0.74
HDAC3-204ENST00000469207 KIF3BO15066 747 aa19.63■□□□□ 0.73
HDAC3-204ENST00000469207 FBXO31Q5XUX0 539 aaPredicted RBP19.63■□□□□ 0.73
HDAC3-204ENST00000469207 DHX29Q7Z478 1369 aaKnown RBP19.62■□□□□ 0.73
HDAC3-204ENST00000469207 ZNF335Q9H4Z2 1342 aaPredicted RBP19.62■□□□□ 0.73
HDAC3-204ENST00000469207 NCOA2Q15596 1464 aa19.61■□□□□ 0.73
HDAC3-204ENST00000469207 PPP6R1Q9UPN7 881 aa19.6■□□□□ 0.73
HDAC3-204ENST00000469207 RTEL1-TNFRSF6BF6WH68 1400 aa19.59■□□□□ 0.73
HDAC3-204ENST00000469207 ADGBQ8N7X0 1667 aa19.59■□□□□ 0.73
HDAC3-204ENST00000469207 ILDR2Q71H61 639 aa19.58■□□□□ 0.72
HDAC3-204ENST00000469207 MYO3AQ8NEV4 1616 aa19.57■□□□□ 0.72
HDAC3-204ENST00000469207 DISP3Q9P2K9 1392 aa19.57■□□□□ 0.72
HDAC3-204ENST00000469207 CAMSAP2Q08AD1 1489 aa19.56■□□□□ 0.72
HDAC3-204ENST00000469207 PKD2Q13563 968 aa19.56■□□□□ 0.72
HDAC3-204ENST00000469207 KANK4Q5T7N3 995 aaPredicted RBP19.56■□□□□ 0.72
HDAC3-204ENST00000469207 CEP170BQ9Y4F5 1589 aaPredicted RBP19.56■□□□□ 0.72
HDAC3-204ENST00000469207 CCDC141Q6ZP82 1450 aa19.54■□□□□ 0.72
HDAC3-204ENST00000469207 WASHC2CQ9Y4E1 1318 aa19.53■□□□□ 0.72
HDAC3-204ENST00000469207 RSPH4AQ5TD94 716 aa19.53■□□□□ 0.72
HDAC3-204ENST00000469207 TSPY4P0CV99 314 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms