RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 ECM2O94769 699 aaPredicted RBP8.2□□□□□ -1.1
SF3B1-207ENST00000468925 VGFO15240 615 aaPredicted RBP8.19□□□□□ -1.1
SF3B1-207ENST00000468925 BOLA1Q9Y3E2 137 aa8.19□□□□□ -1.1
SF3B1-207ENST00000468925 DOK7Q18PE1 504 aa8.18□□□□□ -1.1
SF3B1-207ENST00000468925 PHF8Q9UPP1 1060 aa8.17□□□□□ -1.1
SF3B1-207ENST00000468925 BCL11BQ9C0K0 894 aaPredicted RBP8.16□□□□□ -1.1
SF3B1-207ENST00000468925 STK24Q9Y6E0 443 aa8.16□□□□□ -1.1
SF3B1-207ENST00000468925 TTBK1Q5TCY1 1321 aaPredicted RBP8.15□□□□□ -1.1
SF3B1-207ENST00000468925 RGL2O15211 777 aa8.14□□□□□ -1.11
SF3B1-207ENST00000468925 STK25O00506 426 aa8.13□□□□□ -1.11
SF3B1-207ENST00000468925 PKD2Q13563 968 aa8.13□□□□□ -1.11
SF3B1-207ENST00000468925 MS4A4AQ96JQ5 239 aa8.13□□□□□ -1.11
SF3B1-207ENST00000468925 ANKRD13DQ6ZTN6 518 aa8.12□□□□□ -1.11
SF3B1-207ENST00000468925 MICALL2Q8IY33 904 aa8.1□□□□□ -1.11
SF3B1-207ENST00000468925 RIMBP2O15034 1052 aa8.09□□□□□ -1.11
SF3B1-207ENST00000468925 SOX12O15370 315 aa8.09□□□□□ -1.11
SF3B1-207ENST00000468925 GPR153Q6NV75 609 aa8.08□□□□□ -1.12
SF3B1-207ENST00000468925 ZSWIM6Q9HCJ5 1215 aa8.08□□□□□ -1.12
SF3B1-207ENST00000468925 TMEM92Q6UXU6 159 aa8.07□□□□□ -1.12
SF3B1-207ENST00000468925 LSM11P83369 360 aaKnown RBP eCLIP8.06□□□□□ -1.12
SF3B1-207ENST00000468925 TAOK2Q9UL54 1235 aa8.06□□□□□ -1.12
SF3B1-207ENST00000468925 NLRP6P59044 892 aa8.05□□□□□ -1.12
SF3B1-207ENST00000468925 HCSTQ9UBK5 93 aa8.05□□□□□ -1.12
SF3B1-207ENST00000468925 NISCHQ9Y2I1 1504 aa8.04□□□□□ -1.12
SF3B1-207ENST00000468925 MFRPQ9BY79 579 aa8.04□□□□□ -1.12
SF3B1-207ENST00000468925 FBXO22Q8NEZ5 403 aa8.03□□□□□ -1.12
SF3B1-207ENST00000468925 HRCP23327 699 aa8□□□□□ -1.13
SF3B1-207ENST00000468925 IRX2Q9BZI1 471 aaPredicted RBP7.99□□□□□ -1.13
SF3B1-207ENST00000468925 PPP1R37O75864 691 aa7.96□□□□□ -1.14
SF3B1-207ENST00000468925 ZNF316A6NFI3 1004 aaPredicted RBP7.95□□□□□ -1.14
SF3B1-207ENST00000468925 RGS20O76081 388 aa7.95□□□□□ -1.14
SF3B1-207ENST00000468925 CHGAP10645 457 aaKnown RBP7.95□□□□□ -1.14
SF3B1-207ENST00000468925 POTEEQ6S8J3 1075 aa7.95□□□□□ -1.14
SF3B1-207ENST00000468925 KHSRPQ92945 711 aaKnown RBP eCLIP7.94□□□□□ -1.14
SF3B1-207ENST00000468925 C2orf72A6NCS6 295 aa7.93□□□□□ -1.14
SF3B1-207ENST00000468925 ARSIQ5FYB1 569 aa7.92□□□□□ -1.14
SF3B1-207ENST00000468925 DCAF8L2P0C7V8 631 aa7.9□□□□□ -1.14
SF3B1-207ENST00000468925 PBX2P40425 430 aa7.9□□□□□ -1.14
SF3B1-207ENST00000468925 HS6ST3Q8IZP7 471 aa7.89□□□□□ -1.15
SF3B1-207ENST00000468925 TMC2Q8TDI7 906 aa7.88□□□□□ -1.15
SF3B1-207ENST00000468925 AXIN2Q9Y2T1 843 aa7.86□□□□□ -1.15
SF3B1-207ENST00000468925 KIF3CO14782 793 aa7.85□□□□□ -1.15
SF3B1-207ENST00000468925 NUDT7P0C024 238 aa7.85□□□□□ -1.15
SF3B1-207ENST00000468925 IFFO2Q5TF58 517 aa7.84□□□□□ -1.15
SF3B1-207ENST00000468925 ADGRD1Q6QNK2 874 aa7.84□□□□□ -1.15
SF3B1-207ENST00000468925 NKX1-1Q15270 411 aaPredicted RBP7.83□□□□□ -1.16
SF3B1-207ENST00000468925 PCDHGA4Q9Y5G9 962 aa7.8□□□□□ -1.16
SF3B1-207ENST00000468925 A0A0G2JS52 829 aa7.79□□□□□ -1.16
SF3B1-207ENST00000468925 HRO43593 1189 aa7.79□□□□□ -1.16
SF3B1-207ENST00000468925 LHX6Q9UPM6 363 aa7.78□□□□□ -1.16
SF3B1-207ENST00000468925 Q6ZNB5 142 aa7.77□□□□□ -1.17
SF3B1-207ENST00000468925 PLPP6Q8IY26 295 aa7.77□□□□□ -1.17
SF3B1-207ENST00000468925 DAXXQ9UER7 740 aaPredicted RBP7.77□□□□□ -1.17
SF3B1-207ENST00000468925 DSG2Q14126 1118 aa7.76□□□□□ -1.17
SF3B1-207ENST00000468925 KCTD12Q96CX2 325 aaKnown RBP7.75□□□□□ -1.17
SF3B1-207ENST00000468925 LCE2BO14633 110 aa7.74□□□□□ -1.17
SF3B1-207ENST00000468925 PRKCSHP14314 528 aaPredicted RBP7.74□□□□□ -1.17
SF3B1-207ENST00000468925 UPF1Q92900 1129 aaKnown RBP eCLIP7.74□□□□□ -1.17
SF3B1-207ENST00000468925 TK2O00142 265 aa7.73□□□□□ -1.17
SF3B1-207ENST00000468925 GPHNQ9NQX3 736 aaPredicted RBP7.73□□□□□ -1.17
SF3B1-207ENST00000468925 ARHGAP33O14559 1287 aa7.72□□□□□ -1.17
SF3B1-207ENST00000468925 SLC34A2O95436 690 aa7.72□□□□□ -1.17
SF3B1-207ENST00000468925 ZEB1P37275 1124 aaPredicted RBP7.72□□□□□ -1.17
SF3B1-207ENST00000468925 FOXK1P85037 733 aa7.72□□□□□ -1.17
SF3B1-207ENST00000468925 GTPBP6O43824 516 aaPredicted RBP7.69□□□□□ -1.18
SF3B1-207ENST00000468925 DMRTA1Q5VZB9 504 aa7.68□□□□□ -1.18
SF3B1-207ENST00000468925 DNAJC5Q9H3Z4 198 aa7.68□□□□□ -1.18
SF3B1-207ENST00000468925 RYDENQ9NUL5 291 aaKnown RBP7.68□□□□□ -1.18
SF3B1-207ENST00000468925 PPP1R15BQ5SWA1 713 aa7.67□□□□□ -1.18
SF3B1-207ENST00000468925 PTCD2Q8WV60 388 aaKnown RBP7.67□□□□□ -1.18
SF3B1-207ENST00000468925 CRISPLD2Q9H0B8 497 aa7.66□□□□□ -1.18
SF3B1-207ENST00000468925 NCKAP5LQ9HCH0 1330 aa7.66□□□□□ -1.18
SF3B1-207ENST00000468925 PSEN2P49810 448 aa7.65□□□□□ -1.18
SF3B1-207ENST00000468925 LARP6Q9BRS8 491 aaKnown RBP7.65□□□□□ -1.18
SF3B1-207ENST00000468925 PTPN5P54829 565 aa7.64□□□□□ -1.19
SF3B1-207ENST00000468925 TBC1D12O60347 775 aa7.63□□□□□ -1.19
SF3B1-207ENST00000468925 BCANQ96GW7 911 aa7.63□□□□□ -1.19
SF3B1-207ENST00000468925 KDM4FA0A1W2PPD8 638 aa7.62□□□□□ -1.19
SF3B1-207ENST00000468925 PDE4AP27815 886 aa7.62□□□□□ -1.19
SF3B1-207ENST00000468925 CADPS2Q86UW7 1296 aa7.62□□□□□ -1.19
SF3B1-207ENST00000468925 PPP4R3BQ5MIZ7 849 aa7.61□□□□□ -1.19
SF3B1-207ENST00000468925 ZNF454Q8N9F8 522 aa7.61□□□□□ -1.19
SF3B1-207ENST00000468925 OXER1Q8TDS5 423 aa7.61□□□□□ -1.19
SF3B1-207ENST00000468925 KCNK17Q96T54 332 aa7.61□□□□□ -1.19
SF3B1-207ENST00000468925 PLCB2Q00722 1185 aa7.6□□□□□ -1.19
SF3B1-207ENST00000468925 DDX27Q96GQ7 796 aaKnown RBP7.6□□□□□ -1.19
SF3B1-207ENST00000468925 PSDA5PKW4 1024 aaPredicted RBP7.59□□□□□ -1.19
SF3B1-207ENST00000468925 TRAF7Q6Q0C0 670 aa7.58□□□□□ -1.2
SF3B1-207ENST00000468925 DCAF1Q9Y4B6 1507 aa7.57□□□□□ -1.2
SF3B1-207ENST00000468925 THSD4Q6ZMP0 1018 aa7.56□□□□□ -1.2
SF3B1-207ENST00000468925 ERICH6Q7L0X2 663 aa7.56□□□□□ -1.2
SF3B1-207ENST00000468925 EVI5O60447 810 aa7.55□□□□□ -1.2
SF3B1-207ENST00000468925 MAP3K9P80192 1104 aa7.55□□□□□ -1.2
SF3B1-207ENST00000468925 EMILIN3Q9NT22 766 aa7.55□□□□□ -1.2
SF3B1-207ENST00000468925 ARXQ96QS3 562 aa7.54□□□□□ -1.2
SF3B1-207ENST00000468925 LAPTM4AQ15012 233 aa7.53□□□□□ -1.2
SF3B1-207ENST00000468925 KCNH8Q96L42 1107 aa7.53□□□□□ -1.2
SF3B1-207ENST00000468925 STAC3Q96MF2 364 aa7.53□□□□□ -1.2
SF3B1-207ENST00000468925 FOSBP53539 338 aa7.52□□□□□ -1.21
SF3B1-207ENST00000468925 MFSD10Q14728 455 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms